CuGenDBv2

Gene ID	Spg020502
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Protein TIC 214
Genome location	scaffold1:35926426..35928279
RNA-Seq Expression	Spg020502
Synteny	Spg020502
Gene Ontology terms	GO:0015031 - protein transport (biological process) GO:0009706 - chloroplast inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR008896 - Protein TIC214

Homology

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GenBank top hits

e value

%identity

Alignment

QPZ51595.1 hypothetical chloroplast RF1 [Mazus pumilus]

1.5e-16

72.86

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Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP +      +N +  YG T +  +
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV

YP_010130347.1 hypothetical chloroplast RF1 [Dodartia orientalis]

1.5e-16

72.86

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Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP +      +N +  YG T +  +
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV

YP_010130422.1 hypothetical chloroplast RF1 [Puchiumazus lanceifolius]

1.5e-16

72.86

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Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP +      +N +  YG T +  +
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV

YP_010130434.1 hypothetical chloroplast RF1 [Puchiumazus lanceifolius]

1.5e-16

72.86

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Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP +      +N +  YG T +  +
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV

YP_010130509.1 hypothetical chloroplast RF1 [Mazus miquelii]

1.5e-16

72.86

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Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP +      +N +  YG T +  +
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV

TrEMBL top hits

e value

%identity

Alignment

A0A4P2SPV0 Protein TIC 214

7.3e-17

72.86

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Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP +      +N +  YG T +  +
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV

A0A4Y5N2B2 Protein TIC 214

7.3e-17

72.86

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Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP +      +N +  YG T +  +
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV

A0A7T3PDI7 Hypothetical chloroplast RF1

7.3e-17

72.86

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Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP +      +N +  YG T +  +
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV

A0A7T3PDN1 Hypothetical chloroplast RF1

7.3e-17

72.86

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Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP +      +N +  YG T +  +
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV

A0A7T3U5C8 Hypothetical chloroplast RF1

7.3e-17

72.86

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Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP +      +N +  YG T +  +
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRS---SNEQPVYGPTIKQKV

SwissProt top hits

e value

%identity

Alignment

A0A393 Protein TIC 214

2.6e-19

100

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Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP

A6MM95 Protein TIC 214

2.6e-19

100

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Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP

Q2MIC9 Protein TIC 214

2.6e-19

100

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Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP

Q33BW4 Protein TIC 214

2.6e-19

100

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Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP

Q3C1P6 Protein TIC 214

2.6e-19

100

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Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP

Arabidopsis top hits

e value

%identity

Alignment

AT2G07739.1 Ycf1 protein

2.7e-19

97.83

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Query:  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
        EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLALP
Subjt:  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP

ATCG01000.1 Ycf1 protein

2.7e-19

97.83

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Query:  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
        EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLALP
Subjt:  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP

ATCG01130.1 Ycf1 protein

2.7e-19

97.83

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Query:  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
        EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLALP
Subjt:  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP

ATMG00370.1 Ycf1 protein

2.7e-19

97.83

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Query:  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
        EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLALP
Subjt:  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP

Sequences

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CDS sequence

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ATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAG
ACCTCATACAATAACTGTCCTAGCTCTACCACCTATACCGCGCTCCTCTAATGAGCAACCTGTTTATGGTCCAACCATTAAACAGAAAGTCCCTCTCGGGCCAGTGAGAG
GGCGGGATCCCTTTGTTCAAGTCCCGGAGTCACCACTTAAGGGAACACTCATCTACTTCTCCTAG

mRNA sequence

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Protein sequence

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MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPPIPRSSNEQPVYGPTIKQKVPLGPVRGRDPFVQVPESPLKGTLIYFS

Spg020502 (gene) of Sponge gourd (cylindrica) v1 genome