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Spg020509 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020509
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold1:36539596..36544759
RNA-Seq ExpressionSpg020509
SyntenySpg020509
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036950.1 uncharacterized protein E6C27_scaffold86G00300 [Cucumis melo var. makuwa]1.5e-0838.83Show/hide
Query:  YAQQGQYKEKEPEIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKR
        Y  QG+ + K+ +I    +++ E +  KD   P+PL +F++E      T     + LTIQ+PS +K+KD KA+PW Y C  +     +V NI GISG+ R
Subjt:  YAQQGQYKEKEPEIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKR

Query:  SGR
        SGR
Subjt:  SGR

KAA0037621.1 uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa]4.4e-0840Show/hide
Query:  QGQYKEKEPEIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKRSGR
        +GQ K+ E +   +  ++ E +  KD   P+PL +F++E      T     + LTIQ+PS +K+KD KAVPW Y C  +   +  V NI GISG+ RSGR
Subjt:  QGQYKEKEPEIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKRSGR

KAA0046213.1 uncharacterized protein E6C27_scaffold284G00010 [Cucumis melo var. makuwa]3.3e-0840Show/hide
Query:  QGQYKEKEPEIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKRSGR
        +GQ K+ E +   +  ++ E +  KD   P+PL +F++E  +G  T     + L IQ+PS +K+KD KAVPW Y C  +   +  V NI GISG+ RSGR
Subjt:  QGQYKEKEPEIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKRSGR

XP_022157707.1 uncharacterized protein LOC111024360 [Momordica charantia]2.0e-2160Show/hide
Query:  EIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKRSG
        E H VNM+  E+ S K   K +PLV+ FKEQ + +  + +I QPLTIQ+PS YKYKDNKAVPW+YGCH L+EE +IVTNI  +SGM RSG
Subjt:  EIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKRSG

XP_022157707.1 uncharacterized protein LOC111024360 [Momordica charantia]1.4e-0946.67Show/hide
Query:  MSKILEILTAQKGKSTAETHELEDVA---------PPGFTPSVPQHSGASATSVQPIFYTHAPQMPPLGGGAGQNPTFLIPEQVHSYAQQ
        M+KIL++L AQKGK   E     DV           PGFTP V  H+G +    QPIFYT  P M   G GA QN TF++ EQVH   QQ
Subjt:  MSKILEILTAQKGKSTAETHELEDVA---------PPGFTPSVPQHSGASATSVQPIFYTHAPQMPPLGGGAGQNPTFLIPEQVHSYAQQ

XP_022157707.1 uncharacterized protein LOC111024360 [Momordica charantia]1.2e-0839.81Show/hide
Query:  YAQQGQYKEKEPEIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKR
        Y  QG+ + K+ +I +   ++ E +  KD   P+PL +F++E      T     + LTIQ+PS +K+KD KAVPW Y C  +   +  V NI GISG+ R
Subjt:  YAQQGQYKEKEPEIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKR

Query:  SGR
        SGR
Subjt:  SGR

TrEMBL top hitse value%identityAlignment
A0A5A7T0H8 Uncharacterized protein2.1e-0839Show/hide
Query:  QGQYKEKEPEIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKRSGR
        +GQ K+ E +   + +++ E +  KD   P+PL +F++E      T     + LTIQ+PS +K+KD KAVPW Y C  +     +V NI  ISG+ RSGR
Subjt:  QGQYKEKEPEIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKRSGR

A0A5A7T0R1 Uncharacterized protein7.3e-0938.83Show/hide
Query:  YAQQGQYKEKEPEIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKR
        Y  QG+ + K+ +I    +++ E +  KD   P+PL +F++E      T     + LTIQ+PS +K+KD KA+PW Y C  +     +V NI GISG+ R
Subjt:  YAQQGQYKEKEPEIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKR

Query:  SGR
        SGR
Subjt:  SGR

A0A5A7TRL7 Ribonuclease H1.6e-0840Show/hide
Query:  QGQYKEKEPEIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKRSGR
        +GQ K+ E +   +  ++ E +  KD   P+PL +F++E  +G  T     + L IQ+PS +K+KD KAVPW Y C  +   +  V NI GISG+ RSGR
Subjt:  QGQYKEKEPEIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKRSGR

A0A6J1DV70 uncharacterized protein LOC1110243609.8e-2260Show/hide
Query:  EIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKRSG
        E H VNM+  E+ S K   K +PLV+ FKEQ + +  + +I QPLTIQ+PS YKYKDNKAVPW+YGCH L+EE +IVTNI  +SGM RSG
Subjt:  EIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKRSG

A0A6J1DV70 uncharacterized protein LOC1110243606.6e-1046.67Show/hide
Query:  MSKILEILTAQKGKSTAETHELEDVA---------PPGFTPSVPQHSGASATSVQPIFYTHAPQMPPLGGGAGQNPTFLIPEQVHSYAQQ
        M+KIL++L AQKGK   E     DV           PGFTP V  H+G +    QPIFYT  P M   G GA QN TF++ EQVH   QQ
Subjt:  MSKILEILTAQKGKSTAETHELEDVA---------PPGFTPSVPQHSGASATSVQPIFYTHAPQMPPLGGGAGQNPTFLIPEQVHSYAQQ

A0A6J1DV70 uncharacterized protein LOC1110243605.6e-0939.81Show/hide
Query:  YAQQGQYKEKEPEIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKR
        Y  QG+ + K+ +I +   ++ E +  KD   P+PL +F++E      T     + LTIQ+PS +K+KD KAVPW Y C  +   +  V NI GISG+ R
Subjt:  YAQQGQYKEKEPEIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKR

Query:  SGR
        SGR
Subjt:  SGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAAATCCTGGAGATCCTTACTGCGCAAAAGGGGAAATCTACGGCCGAAACTCATGAACTAGAAGATGTTGCACCTCCAGGTTTTACCCCATCAGTACCTCAGCA
TAGCGGGGCATCGGCTACATCTGTACAACCGATATTCTATACTCATGCACCTCAAATGCCTCCATTAGGAGGAGGGGCAGGTCAAAACCCCACATTTCTCATTCCTGAGC
AAGTCCACTCCTATGCACAACAGGGGCAATATAAGGAAAAGGAACCGGAAATTCATTCTGTAAACATGATCATTGGAGAAGATACCTCAGTAAAAGATTTGTGTAAGCCA
AAACCCCTGGTAATATTTTTTAAGGAACAACTTTCAGGTGTCCAAACTGATTTGACCATCTCACAACCGTTAACTATCCAAATCCCTAGTTCTTACAAATATAAAGACAA
CAAAGCAGTACCATGGAATTATGGTTGTCATGGCCTCAATGAAGAAGCTGCTATCGTCACCAACATTTTGGGAATCAGTGGTATGAAAAGGAGTGGAAGGGATAAGGCTG
GGTACCTTATCCTGGTGACACTATGTGATACGGCCCACCTTGTAATCGATACAGATGCAATGATCCAAAGCATCCATATTTGTATGGGTGAGAGTGGCCAGTTCGCCGAC
TCAATAAGCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTATTGGGAAATATTCTATAGTGAGAAGAG
TGCAGCTAGAATTCTCCCAAAGGCTCCCACAAGTCTCCTGCCTCTAGAAGTCTCAGAGTCATACCGGTGTTATAAGCCAACTGCTGTGGACTGGAAGAATGTCCAAGAAG
AAAAAAGAAAGCAAAGGAGCGCCAGATTAGAAAATCGAGAAGTAAGTACCAAGAGAATGAGCATACCCCATCTCTATGAGACTTTCAAGAAGAGCAAAGTCGAAGCAGAC
AAGTTAGTATTAGAGATGTCAGATTTATCCATCACCGCCATCATTGAAGAATATGTGGAATCTGTAGATTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAAATCCTGGAGATCCTTACTGCGCAAAAGGGGAAATCTACGGCCGAAACTCATGAACTAGAAGATGTTGCACCTCCAGGTTTTACCCCATCAGTACCTCAGCA
TAGCGGGGCATCGGCTACATCTGTACAACCGATATTCTATACTCATGCACCTCAAATGCCTCCATTAGGAGGAGGGGCAGGTCAAAACCCCACATTTCTCATTCCTGAGC
AAGTCCACTCCTATGCACAACAGGGGCAATATAAGGAAAAGGAACCGGAAATTCATTCTGTAAACATGATCATTGGAGAAGATACCTCAGTAAAAGATTTGTGTAAGCCA
AAACCCCTGGTAATATTTTTTAAGGAACAACTTTCAGGTGTCCAAACTGATTTGACCATCTCACAACCGTTAACTATCCAAATCCCTAGTTCTTACAAATATAAAGACAA
CAAAGCAGTACCATGGAATTATGGTTGTCATGGCCTCAATGAAGAAGCTGCTATCGTCACCAACATTTTGGGAATCAGTGGTATGAAAAGGAGTGGAAGGGATAAGGCTG
GGTACCTTATCCTGGTGACACTATGTGATACGGCCCACCTTGTAATCGATACAGATGCAATGATCCAAAGCATCCATATTTGTATGGGTGAGAGTGGCCAGTTCGCCGAC
TCAATAAGCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTATTGGGAAATATTCTATAGTGAGAAGAG
TGCAGCTAGAATTCTCCCAAAGGCTCCCACAAGTCTCCTGCCTCTAGAAGTCTCAGAGTCATACCGGTGTTATAAGCCAACTGCTGTGGACTGGAAGAATGTCCAAGAAG
AAAAAAGAAAGCAAAGGAGCGCCAGATTAGAAAATCGAGAAGTAAGTACCAAGAGAATGAGCATACCCCATCTCTATGAGACTTTCAAGAAGAGCAAAGTCGAAGCAGAC
AAGTTAGTATTAGAGATGTCAGATTTATCCATCACCGCCATCATTGAAGAATATGTGGAATCTGTAGATTCCTAG
Protein sequenceShow/hide protein sequence
MSKILEILTAQKGKSTAETHELEDVAPPGFTPSVPQHSGASATSVQPIFYTHAPQMPPLGGGAGQNPTFLIPEQVHSYAQQGQYKEKEPEIHSVNMIIGEDTSVKDLCKP
KPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNILGISGMKRSGRDKAGYLILVTLCDTAHLVIDTDAMIQSIHICMGESGQFAD
SISLPFQGQDRMGAGNITVQDGIHSFPYWEIFYSEKSAARILPKAPTSLLPLEVSESYRCYKPTAVDWKNVQEEKRKQRSARLENREVSTKRMSIPHLYETFKKSKVEAD
KLVLEMSDLSITAIIEEYVESVDS