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Spg020572 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020572
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold9:15587092..15600379
RNA-Seq ExpressionSpg020572
SyntenySpg020572
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7810592.1 hypothetical protein G2W53_037335 [Senna tora]8.5e-1554.32Show/hide
Query:  LEVTREIIYITQAPEEEFHKYWVRFKRLCA-LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSL
        + + R+I  I Q P E  H YW RFKRLCA  P   +SE+ L+LYF +GL P +R MLD ASGG  +DKTP+EA+EIIS++
Subjt:  LEVTREIIYITQAPEEEFHKYWVRFKRLCA-LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSL

KAF7824226.1 hypothetical protein G2W53_022370 [Senna tora]5.5e-1453.09Show/hide
Query:  LEVTREIIYITQAPEEEFHKYWVRFKRLCA-LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSL
        + + R+I  I Q P E  H YW RFKRLCA  P   +SE+ L+ YF +GL P +R MLD ASGG  +DKTP+EA+EIIS++
Subjt:  LEVTREIIYITQAPEEEFHKYWVRFKRLCA-LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSL

KAF7841855.1 hypothetical protein G2W53_004153 [Senna tora]4.7e-1352.44Show/hide
Query:  LEVTREIIYITQAPEEEFHKYWVRFKRLCA--LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSL
        + + R+I  I Q P E  H YW RFKR+CA  L H  +SE+ L+ YF +GL P +R MLD ASGG  +DKTP+EAREI+S++
Subjt:  LEVTREIIYITQAPEEEFHKYWVRFKRLCA--LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSL

RDX86821.1 hypothetical protein CR513_31797, partial [Mucuna pruriens]1.0e-1250.62Show/hide
Query:  VTREIIYITQAPEEEFHKYWVRFKRLCA-LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSLVT
        + +EI  I Q   E  H+YW RFK+LCA  PH  +SE+ L+ YF EGL   DR M+D ASGG  +DKTP+ AR++ISS+ +
Subjt:  VTREIIYITQAPEEEFHKYWVRFKRLCA-LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSLVT

XP_030940156.1 uncharacterized protein LOC115965094 [Quercus lobata]1.4e-1248.75Show/hide
Query:  VTREIIYITQAPEEEFHKYWVRFKRLCA-LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSLV
        + +EI  + Q   E  H+YW RFK+LCA  PH  +SE+ L+ YF EGL P DR M+D+ASGG  +DKTP   R +I+++V
Subjt:  VTREIIYITQAPEEEFHKYWVRFKRLCA-LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSLV

TrEMBL top hitse value%identityAlignment
A0A1S3V035 uncharacterized protein LOC1067704101.9e-1248.78Show/hide
Query:  VTREIIYITQAPEEEFHKYWVRFKRLCA-LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSLVTY
        V ++I  I Q P E   ++W RFKRLC+  P+  +SE+ LL YF EGL P +R M+D ASGG  +DKTPS AR +I+++  Y
Subjt:  VTREIIYITQAPEEEFHKYWVRFKRLCA-LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSLVTY

A0A1U8AKP6 uncharacterized protein LOC1046049992.5e-1248.1Show/hide
Query:  VTREIIYITQAPEEEFHKYWVRFKRLCA-LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSL
        + +EI  + Q   E  H+YW RFK+LCA  PH  +SE+ L+ YF EGL P DR M+D  SGG  +DKTP  AR +I+++
Subjt:  VTREIIYITQAPEEEFHKYWVRFKRLCA-LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSL

A0A1U8KWY0 uncharacterized protein LOC1079215722.5e-1250Show/hide
Query:  VTREIIYITQAPEEEFHKYWVRFKRLCA-LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSLV
        + +EI  I Q   E  ++YW RFKRLCA  P   +SE+ L+ YF EGL P DR M+D ASGG  +DKTP +AR +I+++V
Subjt:  VTREIIYITQAPEEEFHKYWVRFKRLCA-LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSLV

A0A371G8I2 Retrotrans_gag domain-containing protein (Fragment)5.0e-1350.62Show/hide
Query:  VTREIIYITQAPEEEFHKYWVRFKRLCA-LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSLVT
        + +EI  I Q   E  H+YW RFK+LCA  PH  +SE+ L+ YF EGL   DR M+D ASGG  +DKTP+ AR++ISS+ +
Subjt:  VTREIIYITQAPEEEFHKYWVRFKRLCA-LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSLVT

A0A371GBJ2 Retrotrans_gag domain-containing protein (Fragment)1.9e-1246.91Show/hide
Query:  VTREIIYITQAPEEEFHKYWVRFKRLCA-LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSLVT
        + +EI  I Q P E  H+YW RF +LCA  PH  ++E+ L+ YF +GL   DR M+D+ASGG  +DKTP  AR +IS++ +
Subjt:  VTREIIYITQAPEEEFHKYWVRFKRLCA-LPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSLVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCAAGACCTAGTAGCTTCTGATGTGAGTCATCTCTCATCTCTTGGAGACCTCGAAGTCACCAGAGAAATCATATACATCACCCAAGCGCCTGAGGAAGAATTTCA
CAAGTATTGGGTTCGCTTCAAAAGGTTATGTGCACTTCCTCATCGCCCATTGTCTGAGGAGTCCCTGTTGTTGTACTTCATTGAAGGATTAGGACCCGACGATAGGAGGA
TGTTAGATATAGCGAGTGGTGGTGATGCTCTAGACAAAACACCCAGTGAGGCTAGAGAGATAATTTCGAGCTTGGTGACGTATGTTGGACTCATCATATGGCAAGCACGA
AAGGAATGGCGGTACCAAAGCGATGCCTCTATGTTTCAAGACCTTAGTGCCAATGTAGAGGGAAGATGGGATGAGAGTCCAGTAAGCCAATCCCAGGCTAGTAAAGTCTT
CTTTAGGATAATTGAGCTTAGGCTATATCAGGAGTCGATCACGCTAATTGGGGTTAATTCAGGCCAATTACGAAGTTTTGGAGCCATCTCGTTGTCTTGGACAGCGAGGA
GCACTGTTGTAGACCTTTGTAGGACTGACGCCCTATGTGATTACGGCTTGTGCCTGAAAATTGGACAGCGTCGCGACGCTATTGGCACAGCGTCGCGACGCTGTGACGTC
ATTGACTTGCCGGCCAAGAAATGGGATAGCGTCTCGACGCTAGGCGAATTCCATAACTTTCAGAAAAATGGGATTCTTGGAGCTTTGCGATTTGCTAAGATCTTGCATGC
TAGAGTCATTCAAGTGGTGTTGATCAAACCTCTTGTGGATATGGCAAATCATGAGAATGATCCTAACATTACTGAAGCACGGATGAGAGAGGCACAACAAGGAACCATGG
AAAGAATGATTCGTGGTATAGAAGAGTTGTCCGAACGCATGGGAAGGTTGGAGGCTCAGTACCAACCTCGTGAGAGAGTTCCACCACCACGTATTGACAATGATCGAGAG
GATGACTATGAGGATGATGGTTCCGATCAACCAGATGATGACCAAGTTACCTTGGTAGCGATCTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCAAACCTCTTGTGGA
GTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCAAGACCTAGTAGCTTCTGATGTGAGTCATCTCTCATCTCTTGGAGACCTCGAAGTCACCAGAGAAATCATATACATCACCCAAGCGCCTGAGGAAGAATTTCA
CAAGTATTGGGTTCGCTTCAAAAGGTTATGTGCACTTCCTCATCGCCCATTGTCTGAGGAGTCCCTGTTGTTGTACTTCATTGAAGGATTAGGACCCGACGATAGGAGGA
TGTTAGATATAGCGAGTGGTGGTGATGCTCTAGACAAAACACCCAGTGAGGCTAGAGAGATAATTTCGAGCTTGGTGACGTATGTTGGACTCATCATATGGCAAGCACGA
AAGGAATGGCGGTACCAAAGCGATGCCTCTATGTTTCAAGACCTTAGTGCCAATGTAGAGGGAAGATGGGATGAGAGTCCAGTAAGCCAATCCCAGGCTAGTAAAGTCTT
CTTTAGGATAATTGAGCTTAGGCTATATCAGGAGTCGATCACGCTAATTGGGGTTAATTCAGGCCAATTACGAAGTTTTGGAGCCATCTCGTTGTCTTGGACAGCGAGGA
GCACTGTTGTAGACCTTTGTAGGACTGACGCCCTATGTGATTACGGCTTGTGCCTGAAAATTGGACAGCGTCGCGACGCTATTGGCACAGCGTCGCGACGCTGTGACGTC
ATTGACTTGCCGGCCAAGAAATGGGATAGCGTCTCGACGCTAGGCGAATTCCATAACTTTCAGAAAAATGGGATTCTTGGAGCTTTGCGATTTGCTAAGATCTTGCATGC
TAGAGTCATTCAAGTGGTGTTGATCAAACCTCTTGTGGATATGGCAAATCATGAGAATGATCCTAACATTACTGAAGCACGGATGAGAGAGGCACAACAAGGAACCATGG
AAAGAATGATTCGTGGTATAGAAGAGTTGTCCGAACGCATGGGAAGGTTGGAGGCTCAGTACCAACCTCGTGAGAGAGTTCCACCACCACGTATTGACAATGATCGAGAG
GATGACTATGAGGATGATGGTTCCGATCAACCAGATGATGACCAAGTTACCTTGGTAGCGATCTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCAAACCTCTTGTGGA
GTGA
Protein sequenceShow/hide protein sequence
MMQDLVASDVSHLSSLGDLEVTREIIYITQAPEEEFHKYWVRFKRLCALPHRPLSEESLLLYFIEGLGPDDRRMLDIASGGDALDKTPSEAREIISSLVTYVGLIIWQAR
KEWRYQSDASMFQDLSANVEGRWDESPVSQSQASKVFFRIIELRLYQESITLIGVNSGQLRSFGAISLSWTARSTVVDLCRTDALCDYGLCLKIGQRRDAIGTASRRCDV
IDLPAKKWDSVSTLGEFHNFQKNGILGALRFAKILHARVIQVVLIKPLVDMANHENDPNITEARMREAQQGTMERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDRE
DDYEDDGSDQPDDDQVTLVAILHARVIQVVLIKPLVE