; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg020610 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020610
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold9:17090955..17095578
RNA-Seq ExpressionSpg020610
SyntenySpg020610
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM93404.1 hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda]4.6e-2043.7Show/hide
Query:  AWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHVILDTIATNNRHWGETEPTTILKNPTKAVETETNSTMQAQIKAIH
        AWERF+ L+RKCPHHG+P CI +E FY+GL+ AS+ +++ASANG+ L KS NEA  IL+TIA+NN  W  T   T  K     +E +  + + AQ+ ++ 
Subjt:  AWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHVILDTIATNNRHWGETEPTTILKNPTKAVETETNSTMQAQIKAIH

Query:  SMMMGMTMSNQANIALANAISS--LCCEICAEANV
        +++  +++ N  NI  A AI S  + C  C E +V
Subjt:  SMMMGMTMSNQANIALANAISS--LCCEICAEANV

XP_024950038.1 uncharacterized protein LOC112496798 [Citrus sinensis]5.6e-1841.35Show/hide
Query:  AWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHVILDTIATNNRHWGETEPTTILKNPTKAVETETNSTMQAQIKAIH
        AWE+F+ L+RKCPHHG+P CI LE FY+GL+ +++ +V+ SANG+ L KS NEA+ IL+ IA NN  W  T      +  T     +T + + AQ+ ++ 
Subjt:  AWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHVILDTIATNNRHWGETEPTTILKNPTKAVETETNSTMQAQIKAIH

Query:  SMMMGMTMSNQANIALANAISSLCCEICAEANV
         M+  MT +     A  N IS L C  C E ++
Subjt:  SMMMGMTMSNQANIALANAISSLCCEICAEANV

XP_030478229.1 uncharacterized protein LOC115695294 [Cannabis sativa]9.6e-1840Show/hide
Query:  AWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHVILDTIATNNRHWGETEPTTILKNPTKAVETETNSTMQAQIKAIH
        AWERF+  +RKCPHHG+P CI +E FY+GL+ AS+ +++ASANG+ L KS NEA  IL+TIA+NN  W  T   T  K     +E +  + + AQ+ ++ 
Subjt:  AWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHVILDTIATNNRHWGETEPTTILKNPTKAVETETNSTMQAQIKAIH

Query:  SMMMGMTMSNQANIALANAISS--LCCEICAEANV
        +++  +++    N+  A  I +  + C  C E +V
Subjt:  SMMMGMTMSNQANIALANAISS--LCCEICAEANV

XP_030483354.1 uncharacterized protein LOC115699947 [Cannabis sativa]9.6e-1837.08Show/hide
Query:  FRRRRKEERRKIREQQELSAQEPLEEASYIQEFPMEPPGVDPQVAWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHV
        F R+     RK + + E+ + + LE+ S                AWERF+ L+RKCPHHG+P CI +E FY+GL+ AS+ +++ASANG+ L KS NEA  
Subjt:  FRRRRKEERRKIREQQELSAQEPLEEASYIQEFPMEPPGVDPQVAWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHV

Query:  ILDTIATNNRHWGETEPTTILKNPTKAVETETNSTMQAQIKAIHSMMMGMTMSNQANIALANAISS--LCCEICAEAN
        IL+TIA+NN  W  T   T  K     +E +  + + AQ+ ++ +++  +++ N  NI  A AI S  + C  C E +
Subjt:  ILDTIATNNRHWGETEPTTILKNPTKAVETETNSTMQAQIKAIHSMMMGMTMSNQANIALANAISS--LCCEICAEAN

XP_030505184.1 uncharacterized protein LOC115720166 [Cannabis sativa]9.6e-1841.04Show/hide
Query:  AWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHVILDTIATNNRHWGETEPTTILKNPTKAVETETNSTMQAQIKAIH
        AWERF+ L+RKCPHHG+P CI +E FY+GL+  S+ +++ASANG+ L KS NEA  IL+TIA+NN  W  T      K     +E +  + +  Q+ ++ 
Subjt:  AWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHVILDTIATNNRHWGETEPTTILKNPTKAVETETNSTMQAQIKAIH

Query:  SMMMGMTMSNQANIALANAISS--LCCEICAEAN
        +++  +++ N  NI  A AI S  + C  C E +
Subjt:  SMMMGMTMSNQANIALANAISS--LCCEICAEAN

TrEMBL top hitse value%identityAlignment
A0A5B6VWJ0 Retroelement pol polyprotein-like6.3e-1536.96Show/hide
Query:  AWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHVILDTIATNNRHWGETEPTTILKNPTKAV---ETETNSTMQAQIK
        AWERF+ L++KCPHHG+P CI LE FY+GL   ++ +V+ASANG+ L KS NEA+ I++ IA+NN  W    PT+   +  +     E +  +++ +Q+ 
Subjt:  AWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHVILDTIATNNRHWGETEPTTILKNPTKAV---ETETNSTMQAQIK

Query:  AIHSMMMGMTMSNQANIAL--ANAISSLCCEICAEANV
        +I SM   +T +   + A    N   ++    C E ++
Subjt:  AIHSMMMGMTMSNQANIAL--ANAISSLCCEICAEANV

A0A6J1EEI2 uncharacterized protein LOC1114333943.9e-1736.88Show/hide
Query:  AWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHVILDTIATNNRHWGETEPTTILKNPTK----AVETETNSTMQAQI
        AWERF+ ++RKCPHHGLP CI +E FY+GL+ A+K +V+ASANG+ L K+ NEA+ IL+ IA+NN  W +     +  NP +     +E +  S++ AQ+
Subjt:  AWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHVILDTIATNNRHWGETEPTTILKNPTK----AVETETNSTMQAQI

Query:  KAIHSMMMGMTMSNQA-------NIALANAISSLCCEICAE
         ++ +++  + +   +        +A+ N  ++  C  C E
Subjt:  KAIHSMMMGMTMSNQA-------NIALANAISSLCCEICAE

A0A6J1G7Q6 uncharacterized protein LOC1114515986.3e-1536.84Show/hide
Query:  AWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHVILDTIATNNRHWGETEPTTILKNPTKAVETETNSTMQAQIKAIH
        AWERF+  +RKCPHHGLP CI +E FY+GL+ A+K +V+ASANG  L K+ NEA+ IL+ IA+NN  W +   +   K   + +E +  S++ AQ+ ++ 
Subjt:  AWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHVILDTIATNNRHWGETEPTTILKNPTKAVETETNSTMQAQIKAIH

Query:  SMMMGMTMSNQANIALANAISSLCCEICAEANV
        +++  +     + I      +++  +   E+ V
Subjt:  SMMMGMTMSNQANIALANAISSLCCEICAEANV

A0A6J1H7E4 uncharacterized protein LOC1114611682.2e-1532.65Show/hide
Query:  AWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHVILDTIATNNRHWGETEPTTILKNPTK----AVETETNSTMQAQI
        AWERF+ ++RKCPHHGLP CI +E FY+GL+ A+K +V+ASANG+ L K+ NEA+ IL+ IA+NN  W +     +  NP K     +E +  S++ AQ+
Subjt:  AWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHVILDTIATNNRHWGETEPTTILKNPTK----AVETETNSTMQAQI

Query:  KAIHSMMMGMTMSNQANI-------ALANAISSLCCEICAEANVRWQEEQPEATMHGTRRMRPTGFSPAILDQGTSTRTPSSSIMSATSRENPSSS
         ++ +++  +       I       A+    ++  C  C E +   Q  +  A++   R             QG     PSS+  +   R +P+ S
Subjt:  KAIHSMMMGMTMSNQANI-------ALANAISSLCCEICAEANVRWQEEQPEATMHGTRRMRPTGFSPAILDQGTSTRTPSSSIMSATSRENPSSS

U5CUI2 Retrotrans_gag domain-containing protein2.2e-2043.7Show/hide
Query:  AWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHVILDTIATNNRHWGETEPTTILKNPTKAVETETNSTMQAQIKAIH
        AWERF+ L+RKCPHHG+P CI +E FY+GL+ AS+ +++ASANG+ L KS NEA  IL+TIA+NN  W  T   T  K     +E +  + + AQ+ ++ 
Subjt:  AWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKKSANEAHVILDTIATNNRHWGETEPTTILKNPTKAVETETNSTMQAQIKAIH

Query:  SMMMGMTMSNQANIALANAISS--LCCEICAEANV
        +++  +++ N  NI  A AI S  + C  C E +V
Subjt:  SMMMGMTMSNQANIALANAISS--LCCEICAEANV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAGGGGTGTCCACTCCTTAACATTGATCCTAAGATAGAAAGAACCTTTCGTCGTCGTCGGAAGGAGGAAAGACGAAAGATAAGGGAACAACAAGAGTTGAGCGC
ACAGGAACCTCTAGAAGAAGCTTCTTACATACAAGAGTTTCCGATGGAACCACCTGGAGTCGATCCTCAAGTTGCTTGGGAAAGATTTCAAAGGCTGGTTCGGAAGTGTC
CACACCACGGATTGCCTGCATGCATCATCTTAGAGCATTTTTATAGTGGATTAGATCAAGCTTCGAAGGCACTAGTCAATGCATCTGCAAACGGATCTTTTCTAAAGAAG
TCTGCAAATGAGGCACATGTTATCTTGGACACCATAGCCACAAACAATAGACATTGGGGAGAAACTGAGCCAACAACAATTTTGAAGAATCCAACTAAAGCAGTAGAGAC
AGAGACTAATTCTACCATGCAAGCTCAAATCAAGGCTATCCACAGCATGATGATGGGCATGACCATGAGCAATCAAGCGAACATAGCCCTTGCCAATGCTATTTCTTCTC
TCTGTTGTGAAATTTGTGCTGAAGCAAACGTTCGATGGCAAGAAGAGCAACCCGAAGCCACCATGCACGGAACGAGAAGGATGAGACCTACGGGTTTCTCGCCAGCGATC
TTGGACCAAGGAACTTCCACTCGAACTCCTTCTTCCTCGATAATGTCGGCTACCTCGAGGGAGAATCCGAGTTCATCTCAACCAAGAAGCTCCACGCGCACCGAATCCCT
TCATAAAACCCAAAAACTCGAGGGCCAACTATTAAGGAAACGCTCAAGGGAATGGTTTAAAATGATTCAGGAGATGAGAGCCCAAAGACGTGCAGCTCTTGAAGAAGAAG
CAAAAAGGCGTGATGAAGAAGAAGCCGCCCAAGCTGGAGAGAGCTCTCGGCAAGGAGAGACTCCAACGGGTAAAAATTCTGAACCTTCAACTAACCCTTCTTCGTCTTGC
AGGAACAAACCATTTGTTACTTACAGTGCAAGAAAGAAGAGTCCAAAGAAGGTTTCACCTGAACATGCGCTTGTCATCGAGCCCCTCAAAGTAGCAAGAATGCCTCCGGA
TGTATTCGAGGACATGATCCGCCAAGCTGTGGCGCAAGCCCTCCTTATTGCTGAAGGATATAGGAAAAGAGACTTTGAAGAAGAAAGAAAAGTTGAAAGAAAAAAGGAAG
AGGAAAGGCAAGAGGTCGAGAGGGCCATAGAAGCTGAAAAAGAAAGAAATCAAGATGAAGAACTCAGGAGAGCAGCCGCTGAATTGAAATTTCTTGAGGAAGAAAAACAA
AGAAGAGAAAAATTGAAAGAAGACGAGAAAAGAAGAAAAGAGGCTGAAGATTTCCTTGCAGCCTTTGAGCCATTGCACAAGGCTCAAAGTGAGGCTGATTTGCTGCAAGG
AAGAGAAGAATTGGCCCTTGAGGGGCCAAATGAAGAAAATCAAGAAAAAGAAGAAGAAAAAGATGAAGGGAATGAAGGCCAGAATGCGACCGCATTTGGGCCGCGACCTC
CACCAGCAGCTGAGAGCACCTCTTCGGGAGAGAGGAGGGATGAAGAAGAGATTGAAAATAAGGAGGCCGAGACCTCCAGTGATTTAGAAACAGAATCAGATTCAGAGATC
AAGGAGTTGGATGACGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAGGGGTGTCCACTCCTTAACATTGATCCTAAGATAGAAAGAACCTTTCGTCGTCGTCGGAAGGAGGAAAGACGAAAGATAAGGGAACAACAAGAGTTGAGCGC
ACAGGAACCTCTAGAAGAAGCTTCTTACATACAAGAGTTTCCGATGGAACCACCTGGAGTCGATCCTCAAGTTGCTTGGGAAAGATTTCAAAGGCTGGTTCGGAAGTGTC
CACACCACGGATTGCCTGCATGCATCATCTTAGAGCATTTTTATAGTGGATTAGATCAAGCTTCGAAGGCACTAGTCAATGCATCTGCAAACGGATCTTTTCTAAAGAAG
TCTGCAAATGAGGCACATGTTATCTTGGACACCATAGCCACAAACAATAGACATTGGGGAGAAACTGAGCCAACAACAATTTTGAAGAATCCAACTAAAGCAGTAGAGAC
AGAGACTAATTCTACCATGCAAGCTCAAATCAAGGCTATCCACAGCATGATGATGGGCATGACCATGAGCAATCAAGCGAACATAGCCCTTGCCAATGCTATTTCTTCTC
TCTGTTGTGAAATTTGTGCTGAAGCAAACGTTCGATGGCAAGAAGAGCAACCCGAAGCCACCATGCACGGAACGAGAAGGATGAGACCTACGGGTTTCTCGCCAGCGATC
TTGGACCAAGGAACTTCCACTCGAACTCCTTCTTCCTCGATAATGTCGGCTACCTCGAGGGAGAATCCGAGTTCATCTCAACCAAGAAGCTCCACGCGCACCGAATCCCT
TCATAAAACCCAAAAACTCGAGGGCCAACTATTAAGGAAACGCTCAAGGGAATGGTTTAAAATGATTCAGGAGATGAGAGCCCAAAGACGTGCAGCTCTTGAAGAAGAAG
CAAAAAGGCGTGATGAAGAAGAAGCCGCCCAAGCTGGAGAGAGCTCTCGGCAAGGAGAGACTCCAACGGGTAAAAATTCTGAACCTTCAACTAACCCTTCTTCGTCTTGC
AGGAACAAACCATTTGTTACTTACAGTGCAAGAAAGAAGAGTCCAAAGAAGGTTTCACCTGAACATGCGCTTGTCATCGAGCCCCTCAAAGTAGCAAGAATGCCTCCGGA
TGTATTCGAGGACATGATCCGCCAAGCTGTGGCGCAAGCCCTCCTTATTGCTGAAGGATATAGGAAAAGAGACTTTGAAGAAGAAAGAAAAGTTGAAAGAAAAAAGGAAG
AGGAAAGGCAAGAGGTCGAGAGGGCCATAGAAGCTGAAAAAGAAAGAAATCAAGATGAAGAACTCAGGAGAGCAGCCGCTGAATTGAAATTTCTTGAGGAAGAAAAACAA
AGAAGAGAAAAATTGAAAGAAGACGAGAAAAGAAGAAAAGAGGCTGAAGATTTCCTTGCAGCCTTTGAGCCATTGCACAAGGCTCAAAGTGAGGCTGATTTGCTGCAAGG
AAGAGAAGAATTGGCCCTTGAGGGGCCAAATGAAGAAAATCAAGAAAAAGAAGAAGAAAAAGATGAAGGGAATGAAGGCCAGAATGCGACCGCATTTGGGCCGCGACCTC
CACCAGCAGCTGAGAGCACCTCTTCGGGAGAGAGGAGGGATGAAGAAGAGATTGAAAATAAGGAGGCCGAGACCTCCAGTGATTTAGAAACAGAATCAGATTCAGAGATC
AAGGAGTTGGATGACGACTAA
Protein sequenceShow/hide protein sequence
MNKGCPLLNIDPKIERTFRRRRKEERRKIREQQELSAQEPLEEASYIQEFPMEPPGVDPQVAWERFQRLVRKCPHHGLPACIILEHFYSGLDQASKALVNASANGSFLKK
SANEAHVILDTIATNNRHWGETEPTTILKNPTKAVETETNSTMQAQIKAIHSMMMGMTMSNQANIALANAISSLCCEICAEANVRWQEEQPEATMHGTRRMRPTGFSPAI
LDQGTSTRTPSSSIMSATSRENPSSSQPRSSTRTESLHKTQKLEGQLLRKRSREWFKMIQEMRAQRRAALEEEAKRRDEEEAAQAGESSRQGETPTGKNSEPSTNPSSSC
RNKPFVTYSARKKSPKKVSPEHALVIEPLKVARMPPDVFEDMIRQAVAQALLIAEGYRKRDFEEERKVERKKEEERQEVERAIEAEKERNQDEELRRAAAELKFLEEEKQ
RREKLKEDEKRRKEAEDFLAAFEPLHKAQSEADLLQGREELALEGPNEENQEKEEEKDEGNEGQNATAFGPRPPPAAESTSSGERRDEEEIENKEAETSSDLETESDSEI
KELDDD