; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg020631 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020631
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon gag protein
Genome locationscaffold9:15730161..15733784
RNA-Seq ExpressionSpg020631
SyntenySpg020631
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]2.2e-2758.4Show/hide
Query:  GYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRRIRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMS
        G+S+P +RKGLGYKSPEP+RIT+KGK KV DINHIT EE D++  KE  N+R SVF RIRP VAR  VF+RL + E E E +Q   N  R S FRRL  +
Subjt:  GYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRRIRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMS

Query:  VGEEESTLSIPDITRPSAFRRLNMS
          +EEST      TRPSAF RL +S
Subjt:  VGEEESTLSIPDITRPSAFRRLNMS

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]2.2e-2758.4Show/hide
Query:  GYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRRIRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMS
        G+S+P +RKGLGYKSPEP+RIT+KGK KV DINHIT EE D++  KE  N+R SVF RIRP VAR  VF+RL + E E E +Q   N  R S FRRL  +
Subjt:  GYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRRIRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMS

Query:  VGEEESTLSIPDITRPSAFRRLNMS
          +EEST      TRPSAF RL +S
Subjt:  VGEEESTLSIPDITRPSAFRRLNMS

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]7.8e-1734.94Show/hide
Query:  ERKLNLLMKAVDERD-LEIAYLKNQLQSREVAE----LIQFGTLDPIVVRFQKEATMRGPQGKYNSVEDENEGWTLVVRRKKQKQSYARKESRLYRDSKI
        E+++ L ++ V + +  E+  +     SR + E    L+QFGT +PIVV+F +E +   PQG+   +E+++EGW +V  RKK++    ++ESR Y++ + 
Subjt:  ERKLNLLMKAVDERD-LEIAYLKNQLQSREVAE----LIQFGTLDPIVVRFQKEATMRGPQGKYNSVEDENEGWTLVVRRKKQKQSYARKESRLYRDSKI

Query:  KVKSQRKKGKKKSRRSKPVVEESEDFFCPPQPITLAEYFPRSFLDDSKEEALETVTCHVVDVVEDD
          K+Q+ K KKK+ + K V  E  +F  P + +TLA++ P+SFL D ++E  E V CH ++  E++
Subjt:  KVKSQRKKGKKKSRRSKPVVEESEDFFCPPQPITLAEYFPRSFLDDSKEEALETVTCHVVDVVEDD

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]8.1e-1455.21Show/hide
Query:  AVASKISKLIEESSKDKVAIKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQSREVAELIQ
        A+A  I K + ES K  + IK+NPL+      S +     +PDVMSVMMADV  +  MAEMERK+NLLMK VDERD EIA LK Q+Q+RE AE  Q
Subjt:  AVASKISKLIEESSKDKVAIKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQSREVAELIQ

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]2.2e-2758.4Show/hide
Query:  GYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRRIRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMS
        G+S+P +RKGLGYKSPEP+RIT+KGK KV DINHIT EE D++  KE  N+R SVF RIRP VAR  VF+RL + E E E +Q   N  R S FRRL  +
Subjt:  GYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRRIRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMS

Query:  VGEEESTLSIPDITRPSAFRRLNMS
          +EEST      TRPSAF RL +S
Subjt:  VGEEESTLSIPDITRPSAFRRLNMS

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]7.8e-1734.94Show/hide
Query:  ERKLNLLMKAVDERD-LEIAYLKNQLQSREVAE----LIQFGTLDPIVVRFQKEATMRGPQGKYNSVEDENEGWTLVVRRKKQKQSYARKESRLYRDSKI
        E+++ L ++ V + +  E+  +     SR + E    L+QFGT +PIVV+F +E +   PQG+   +E+++EGW +V  RKK++    ++ESR Y++ + 
Subjt:  ERKLNLLMKAVDERD-LEIAYLKNQLQSREVAE----LIQFGTLDPIVVRFQKEATMRGPQGKYNSVEDENEGWTLVVRRKKQKQSYARKESRLYRDSKI

Query:  KVKSQRKKGKKKSRRSKPVVEESEDFFCPPQPITLAEYFPRSFLDDSKEEALETVTCHVVDVVEDD
          K+Q+ K KKK+ + K V  E  +F  P + +TLA++ P+SFL D ++E  E V CH ++  E++
Subjt:  KVKSQRKKGKKKSRRSKPVVEESEDFFCPPQPITLAEYFPRSFLDDSKEEALETVTCHVVDVVEDD

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]8.1e-1455.21Show/hide
Query:  AVASKISKLIEESSKDKVAIKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQSREVAELIQ
        A+A  I K + ES K  + IK+NPL+      S +     +PDVMSVMMADV  +  MAEMERK+NLLMK VDERD EIA LK Q+Q+RE AE  Q
Subjt:  AVASKISKLIEESSKDKVAIKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQSREVAELIQ

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]2.2e-2758.4Show/hide
Query:  GYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRRIRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMS
        G+S+P +RKGLGYKSPEP+RIT+KGK KV DINHIT EE D++  KE  N+R SVF RIRP VAR  VF+RL + E E E +Q   N  R S FRRL  +
Subjt:  GYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRRIRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMS

Query:  VGEEESTLSIPDITRPSAFRRLNMS
          +EEST      TRPSAF RL +S
Subjt:  VGEEESTLSIPDITRPSAFRRLNMS

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]2.2e-2758.4Show/hide
Query:  GYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRRIRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMS
        G+S+P +RKGLGYKSPEP+RIT+KGK KV DINHIT EE D++  KE  N+R SVF RIRP VAR  VF+RL + E E E +Q   N  R S FRRL  +
Subjt:  GYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRRIRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMS

Query:  VGEEESTLSIPDITRPSAFRRLNMS
          +EEST      TRPSAF RL +S
Subjt:  VGEEESTLSIPDITRPSAFRRLNMS

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]8.1e-1455.21Show/hide
Query:  AVASKISKLIEESSKDKVAIKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQSREVAELIQ
        A+A  I K + ES K  + IK+NPL+      S +     +PDVMSVMMADV  +  MAEMERK+NLLMK VDERD EIA LK Q+Q+RE AE  Q
Subjt:  AVASKISKLIEESSKDKVAIKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQSREVAELIQ

TrEMBL top hitse value%identityAlignment
A0A5A7TGM1 Retrotransposon gag protein1.1e-2736.09Show/hide
Query:  LIQFGTLDPIVVRFQKEATMRGPQGKYNSVEDENEGWTLVVRRKKQKQSYARKESRLYRDSKIKVKSQRKKGK--KKSRRSKPVVEESEDFFCPPQPITL
        LIQFGT +PI+VRFQ++      Q K   +EDE E W +V  +K+++ S  +  S  ++       S +KKG+  KK  +SKP+  + EDF  P Q ITL
Subjt:  LIQFGTLDPIVVRFQKEATMRGPQGKYNSVEDENEGWTLVVRRKKQKQSYARKESRLYRDSKIKVKSQRKKGK--KKSRRSKPVVEESEDFFCPPQPITL

Query:  AEYFPRSFLDDSKEEALETVTCHVVDVVEDDDVLASSSGVAAGYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRR
        AE+FPRSFL+D  +E LE   CH   +VE D+                                          N+ + EEVD+S E   + +R SVF R
Subjt:  AEYFPRSFLDDSKEEALETVTCHVVDVVEDDDVLASSSGVAAGYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRR

Query:  IRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMSVGEEESTLSIPDITRPSAFRRLNM
        I+P   R+SVFQRL +   EEE+   T+  TR SAF+ L++S  ++       D    SAF RL M
Subjt:  IRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMSVGEEESTLSIPDITRPSAFRRLNM

A0A5A7TJZ7 Retrotransposon gag protein1.8e-2751.02Show/hide
Query:  GYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRRIRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMS
        G+++P +RKGLGYKSPEP+RITRKGK KV D NHIT +EVD  KEKE   +R S F RI P VAR  VF+RL + E E +  Q T+N  R SAF+RL M+
Subjt:  GYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRRIRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMS

Query:  VGEEESTLSIPDITRPSAFRRLNMSVAEEYGTFSSPDVTRPSVFQRL
          +E+        TRPSAF RL+M+  +   T       RP +F RL
Subjt:  VGEEESTLSIPDITRPSAFRRLNMSVAEEYGTFSSPDVTRPSVFQRL

A0A5A7TJZ7 Retrotransposon gag protein2.1e-0742.5Show/hide
Query:  LIQFGTLDPIVVRFQKEATMRGPQGKYNSVEDENEGWTLVVRRKKQKQSYARKESRLYRDSKIKVKSQRKKGKKKSRRSK
        L+QFGT +P+VV+F +E      + K  S+E+++EGW +V RRKK+K +  +KESR YR+ +   K+++ K KKK+++ K
Subjt:  LIQFGTLDPIVVRFQKEATMRGPQGKYNSVEDENEGWTLVVRRKKQKQSYARKESRLYRDSKIKVKSQRKKGKKKSRRSK

A0A5A7TJZ7 Retrotransposon gag protein1.2e-2650Show/hide
Query:  GYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRRIRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMS
        G+ +P +RKGLGYKSPEP+RITRKGK KV D NHIT +EVD  +EKE  N+R S F RI P VARA VF+RL + E E +  Q T+N  + SAF+RL ++
Subjt:  GYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRRIRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMS

Query:  VGEEESTLSIPDITRPSAFRRLNMSVAEEYGTFSSPDVTR
          EE+        T+PSAF RL+++  +   T  +P + R
Subjt:  VGEEESTLSIPDITRPSAFRRLNMSVAEEYGTFSSPDVTR

A0A5A7U974 Retrotransposon gag protein1.0e-2535.69Show/hide
Query:  LIQFGTLDPIVVRFQKEATMRGPQGKYNSVEDENEGWTLVVRRKKQKQSYARKESRLYRDSKIKVKSQRKKGK--KKSRRSKPVVEESEDFFCPPQPITL
        LIQFGT +PI+VRFQ++      Q K   +EDE E W +V  +K+++ S  + +S  ++       S +KKG+  KK  + KP+ E+ E F  P + ITL
Subjt:  LIQFGTLDPIVVRFQKEATMRGPQGKYNSVEDENEGWTLVVRRKKQKQSYARKESRLYRDSKIKVKSQRKKGK--KKSRRSKPVVEESEDFFCPPQPITL

Query:  AEYFPRSFLDDSKEEALETVTCHVVDVVEDDDVLASSSGVAAGYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRR
        AE+FPRSFL+D  EE LE   CH   +VE D+                                          N+ + EEVD+S E   + +R SVF R
Subjt:  AEYFPRSFLDDSKEEALETVTCHVVDVVEDDDVLASSSGVAAGYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRR

Query:  IRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMSVGEEESTLSIPDITRP--SAFRRLNMS
        I+P   R+SVFQRL +   EEE+    +  TR SAF+RL++S  ++          RP  SAF RL M+
Subjt:  IRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMSVGEEESTLSIPDITRP--SAFRRLNMS

A0A5A7UMY2 Reverse transcriptase domain-containing protein1.5e-2650Show/hide
Query:  GYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRRIRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMS
        G+ +P +RKGLGYKSPEP+RITRKGK KV D NHIT +EVD  +EKE  N+R S F RI P VARA VF+RL + E + +  Q T+N  R SAF+RL ++
Subjt:  GYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRRIRPPVARASVFQRLIVNETEEESVQLTNNSTRPSAFRRLNMS

Query:  VGEEESTLSIPDITRPSAFRRLNMSVAEEYGTFSSPDVTR
          EE+        T+PSAF RL+++  +   T  +P + R
Subjt:  VGEEESTLSIPDITRPSAFRRLNMSVAEEYGTFSSPDVTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGAGATCAAGGAGGATCATACTCCTCTGGCTGTTGCAAGCAAGATCTCAAAGTTGATTGAAGAATCCTCTAAGGATAAAGTTGCAATCAAAGACAACCCACTGTTCGA
ATCTGTCGTTCCAACATCTAAGCAGCCAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCTGATGTAGACCAAGATGAAAGAATGGCAGAGATGGAAAGGA
AACTCAATCTCTTAATGAAGGCAGTTGATGAGAGAGATCTTGAGATTGCCTATTTGAAGAACCAGCTGCAGAGCCGAGAAGTGGCTGAATTAATTCAATTTGGGACCCTT
GATCCTATAGTGGTTCGATTTCAAAAAGAAGCCACAATGAGGGGACCCCAAGGAAAATATAATTCCGTTGAAGATGAGAACGAAGGCTGGACCCTTGTCGTTCGCCGCAA
AAAGCAAAAGCAAAGTTACGCACGGAAAGAGTCCCGCCTATATCGAGATAGTAAAATAAAAGTTAAGTCTCAAAGGAAGAAAGGAAAAAAGAAGTCAAGGAGGTCAAAGC
CTGTCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTGGCAGAATACTTCCCAAGGAGCTTTCTCGATGATAGTAAAGAGGAGGCACTTGAAACT
GTCACGTGTCACGTTGTGGACGTGGTGGAAGATGATGACGTCCTCGCTAGCTCCTCGGGAGTGGCGGCAGGCTATAGTCTGCCTACGACGAGAAAAGGACTTGGATATAA
GTCGCCTGAACCAGTTCGCATAACAAGAAAAGGGAAGGCGAAAGTAGCAGACATAAATCATATAACAGCAGAGGAGGTCGATGACTCAAAAGAAAAAGAGAACGTCAACG
AACGAGCTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTCAGTATTTCAAAGATTAATTGTGAATGAAACAGAAGAGGAAAGCGTACAACTTACCAATAAC
TCCACACGACCGTCAGCTTTTCGAAGGTTAAATATGTCTGTTGGGGAAGAAGAGAGTACACTTTCAATTCCGGATATCACACGACCTTCAGCTTTTAGAAGATTAAATAT
GTCTGTTGCGGAAGAATATGGCACATTTTCAAGTCCGGATGTGACTCGACCATCAGTTTTTCAAAGGTTAAGTGTTACCACGAGAAGAAACCAAAAAAGAGCAGCCTGCT
TCGTCAACTTCTCATCGACTTCAACATGA
mRNA sequenceShow/hide mRNA sequence
ATTGAGATCAAGGAGGATCATACTCCTCTGGCTGTTGCAAGCAAGATCTCAAAGTTGATTGAAGAATCCTCTAAGGATAAAGTTGCAATCAAAGACAACCCACTGTTCGA
ATCTGTCGTTCCAACATCTAAGCAGCCAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCTGATGTAGACCAAGATGAAAGAATGGCAGAGATGGAAAGGA
AACTCAATCTCTTAATGAAGGCAGTTGATGAGAGAGATCTTGAGATTGCCTATTTGAAGAACCAGCTGCAGAGCCGAGAAGTGGCTGAATTAATTCAATTTGGGACCCTT
GATCCTATAGTGGTTCGATTTCAAAAAGAAGCCACAATGAGGGGACCCCAAGGAAAATATAATTCCGTTGAAGATGAGAACGAAGGCTGGACCCTTGTCGTTCGCCGCAA
AAAGCAAAAGCAAAGTTACGCACGGAAAGAGTCCCGCCTATATCGAGATAGTAAAATAAAAGTTAAGTCTCAAAGGAAGAAAGGAAAAAAGAAGTCAAGGAGGTCAAAGC
CTGTCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTGGCAGAATACTTCCCAAGGAGCTTTCTCGATGATAGTAAAGAGGAGGCACTTGAAACT
GTCACGTGTCACGTTGTGGACGTGGTGGAAGATGATGACGTCCTCGCTAGCTCCTCGGGAGTGGCGGCAGGCTATAGTCTGCCTACGACGAGAAAAGGACTTGGATATAA
GTCGCCTGAACCAGTTCGCATAACAAGAAAAGGGAAGGCGAAAGTAGCAGACATAAATCATATAACAGCAGAGGAGGTCGATGACTCAAAAGAAAAAGAGAACGTCAACG
AACGAGCTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTCAGTATTTCAAAGATTAATTGTGAATGAAACAGAAGAGGAAAGCGTACAACTTACCAATAAC
TCCACACGACCGTCAGCTTTTCGAAGGTTAAATATGTCTGTTGGGGAAGAAGAGAGTACACTTTCAATTCCGGATATCACACGACCTTCAGCTTTTAGAAGATTAAATAT
GTCTGTTGCGGAAGAATATGGCACATTTTCAAGTCCGGATGTGACTCGACCATCAGTTTTTCAAAGGTTAAGTGTTACCACGAGAAGAAACCAAAAAAGAGCAGCCTGCT
TCGTCAACTTCTCATCGACTTCAACATGA
Protein sequenceShow/hide protein sequence
IEIKEDHTPLAVASKISKLIEESSKDKVAIKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQSREVAELIQFGTL
DPIVVRFQKEATMRGPQGKYNSVEDENEGWTLVVRRKKQKQSYARKESRLYRDSKIKVKSQRKKGKKKSRRSKPVVEESEDFFCPPQPITLAEYFPRSFLDDSKEEALET
VTCHVVDVVEDDDVLASSSGVAAGYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITAEEVDDSKEKENVNERASVFRRIRPPVARASVFQRLIVNETEEESVQLTNN
STRPSAFRRLNMSVGEEESTLSIPDITRPSAFRRLNMSVAEEYGTFSSPDVTRPSVFQRLSVTTRRNQKRAACFVNFSSTST