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Spg020656 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020656
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold9:17477574..17481641
RNA-Seq ExpressionSpg020656
SyntenySpg020656
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK08698.1 reverse transcriptase [Cucumis melo var. makuwa]6.1e-0450.72Show/hide
Query:  GESGQFADSISLPFQGQDRMGAGNITVQDGIHSFPYWGPLGPTDLKESFLRIFRLVATQPSSASSPSAS
        GESGQ ADSI L F GQDR+G      QDGIHSFP   PLG      +  R  R+V  QPS A     S
Subjt:  GESGQFADSISLPFQGQDRMGAGNITVQDGIHSFPYWGPLGPTDLKESFLRIFRLVATQPSSASSPSAS
TrEMBL top hitse value%identityAlignment
A0A5D3CBX3 Reverse transcriptase2.9e-0450.72Show/hide
Query:  GESGQFADSISLPFQGQDRMGAGNITVQDGIHSFPYWGPLGPTDLKESFLRIFRLVATQPSSASSPSAS
        GESGQ ADSI L F GQDR+G      QDGIHSFP   PLG      +  R  R+V  QPS A     S
Subjt:  GESGQFADSISLPFQGQDRMGAGNITVQDGIHSFPYWGPLGPTDLKESFLRIFRLVATQPSSASSPSAS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAAGCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCATTCCCCTA
TTGGGGTCCATTAGGTCCCACTGACCTTAAAGAAAGCTTCCTTCGCATTTTTCGACTTGTCGCAACTCAGCCTTCTTCTGCTTCAAGTCCTAGTGCTTCAACGCTCACTC
CCCTAGAAGATCAAGAGACAGAAAAGATGGATGAAAAGACAGCTCAGACGCAAACGGCACAGCTAGCGCAACTGGATGCGGTAGCAGTATGCTTAATCCTTGACAGAACA
CAGCACAATGCTCCAATATACGTTCTTATTCCTCCCAACGAACACCACCATGTCGGATCACCCGCTATGACTCTTGGGACTCGAGATCCGGCTTGTGGGAACCGATTGTT
GTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAAGCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCATTCCCCTA
TTGGGGTCCATTAGGTCCCACTGACCTTAAAGAAAGCTTCCTTCGCATTTTTCGACTTGTCGCAACTCAGCCTTCTTCTGCTTCAAGTCCTAGTGCTTCAACGCTCACTC
CCCTAGAAGATCAAGAGACAGAAAAGATGGATGAAAAGACAGCTCAGACGCAAACGGCACAGCTAGCGCAACTGGATGCGGTAGCAGTATGCTTAATCCTTGACAGAACA
CAGCACAATGCTCCAATATACGTTCTTATTCCTCCCAACGAACACCACCATGTCGGATCACCCGCTATGACTCTTGGGACTCGAGATCCGGCTTGTGGGAACCGATTGTT
GTCTTGA
Protein sequenceShow/hide protein sequence
MGESGQFADSISLPFQGQDRMGAGNITVQDGIHSFPYWGPLGPTDLKESFLRIFRLVATQPSSASSPSASTLTPLEDQETEKMDEKTAQTQTAQLAQLDAVAVCLILDRT
QHNAPIYVLIPPNEHHHVGSPAMTLGTRDPACGNRLLS