CuGenDBv2

Gene ID	Spg020657
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	E3 ubiquitin-protein ligase RNF170
Genome location	scaffold9:16707930..16719181
RNA-Seq Expression	Spg020657
Synteny	Spg020657
Gene Ontology terms	GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domains	IPR038896 - E3 ubiquitin-protein ligase RNF170

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7037201.1 E3 ubiquitin-protein ligase-like protein [Cucurbita argyrosperma subsp. argyrosperma]

8.7e-31

46.88

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Query:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI
        F  RCIMLVWDHGSPLQPCKCPLCRRQITLLVPSE SATQ++DPEV RVLN+IR YNRHFGGNSTGLN                                
Subjt:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI

Query:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVY
                                                                      QDLPFLLRRLLRELLNPQRSLPLVIRARVY
Subjt:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVY

XP_022932121.1 E3 ubiquitin-protein ligase RNF170-like [Cucurbita moschata]

1.2e-32

48.44

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Query:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI
        F  RCIMLVWDHGSPLQPCKCPLCRRQITLLVPSE SATQ++DPEV RVLN+IR YNRHFGGNSTGLNQ                               
Subjt:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI

Query:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVY
                                                                    RLQDLPFLLRRLLRELLNPQRSLPLVIRARVY
Subjt:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVY

XP_022972895.1 E3 ubiquitin-protein ligase RNF170-like [Cucurbita maxima]

3.0e-31

47.4

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Query:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI
        F  RCIMLVWDHGS LQPCKCPLCRRQITLLVPSE S TQ++DPEV RVLN+IR YNRHFGGNSTGLNQ                               
Subjt:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI

Query:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVY
                                                                    RLQDLPFLLRRLLRELLNPQRSLPLVIRARVY
Subjt:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVY

XP_038884720.1 E3 ubiquitin-protein ligase RNF170-like isoform X2 [Benincasa hispida]

1.1e-30

46.35

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Query:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI
        F  +CIMLVWDHGSPLQPCKCPLCRRQITLLVPSE S  Q++DPEV RVLN+IRTYNRHFGGNSTGL+Q                               
Subjt:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI

Query:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVY
                                                                    RLQDLPFLLRRLLRELLNPQRSLPLVIR RVY
Subjt:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVY

XP_038884722.1 DNA mismatch repair protein MLH1-like isoform X3 [Benincasa hispida]

1.1e-30

46.35

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Query:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI
        F  +CIMLVWDHGSPLQPCKCPLCRRQITLLVPSE S  Q++DPEV RVLN+IRTYNRHFGGNSTGL+Q                               
Subjt:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI

Query:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVY
                                                                    RLQDLPFLLRRLLRELLNPQRSLPLVIR RVY
Subjt:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KAL3 Uncharacterized protein

9.1e-26

76.62

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Query:  LATFSASLFAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQ
        L   SASL+  +CIMLVWDHGSPL PCKCPLCRR ITLLVPSE S  Q++DPEV RVLN+IRTYNRHFGGNST L+Q
Subjt:  LATFSASLFAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQ

A0A1S3CIS2 E3 ubiquitin-protein ligase RNF170

2.3e-29

44.62

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Query:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI
        F  +CIMLVWDHGSPLQPCKCPLCRR ITLLVPSE S  Q++DPEV RVLN+IRTYNRHFGGNST L+Q                               
Subjt:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI

Query:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVYITV
                                                                    RLQDLPFLLRRLL+ELLNPQRSLPLVIR RVYI +
Subjt:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVYITV

A0A6J1DFH0 E3 ubiquitin-protein ligase RNF170

3.7e-27

43.08

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Query:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI
        F   CIMLVWDHGS LQPCKCPLCRRQITLLVPSE SA Q+++PEV R+LN+IRTYN HFG NS GL Q                               
Subjt:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI

Query:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVYITV
                                                                    R+QDLPFLLRRLLRELL+PQRSLPLVIRARVYI +
Subjt:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVYITV

A0A6J1EVH0 E3 ubiquitin-protein ligase RNF170

5.9e-33

48.44

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Query:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI
        F  RCIMLVWDHGSPLQPCKCPLCRRQITLLVPSE SATQ++DPEV RVLN+IR YNRHFGGNSTGLNQ                               
Subjt:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI

Query:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVY
                                                                    RLQDLPFLLRRLLRELLNPQRSLPLVIRARVY
Subjt:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVY

A0A6J1I9X5 E3 ubiquitin-protein ligase RNF170

1.5e-31

47.4

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Query:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI
        F  RCIMLVWDHGS LQPCKCPLCRRQITLLVPSE S TQ++DPEV RVLN+IR YNRHFGGNSTGLNQ                               
Subjt:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI

Query:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVY
                                                                    RLQDLPFLLRRLLRELLNPQRSLPLVIRARVY
Subjt:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVY

SwissProt top hits

e value

%identity

Alignment

F1MK05 E3 ubiquitin-protein ligase RNF170

2.5e-04

39.68

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Query:  LFAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGG
        LF   CI+  W +GS L    CP+CR+ +TLL+P      Q  D  V  +   I  YNR F G
Subjt:  LFAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGG

Q8CBG9 E3 ubiquitin-protein ligase RNF170

1.5e-04

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Query:  LFAARCIMLVWDHGSPLQPCKCPLCRRQITLL--VPSEDSATQRNDPEVNRVLNSIRTYNRHFGG
        LF   CI+  W +GS L    CP+CR+ +TLL  V  ED  +Q    +V R+   +  YNR F G
Subjt:  LFAARCIMLVWDHGSPLQPCKCPLCRRQITLL--VPSEDSATQRNDPEVNRVLNSIRTYNRHFGG

Q96K19 E3 ubiquitin-protein ligase RNF170

1.5e-04

41.54

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Query:  LFAARCIMLVWDHGSPLQPCKCPLCRRQITLL--VPSEDSATQRNDPEVNRVLNSIRTYNRHFGG
        LF   CI+  W +GS L    CP+CR+ +TLL  V  ED  +Q    +V R+   I  YNR F G
Subjt:  LFAARCIMLVWDHGSPLQPCKCPLCRRQITLL--VPSEDSATQRNDPEVNRVLNSIRTYNRHFGG

Arabidopsis top hits

e value

%identity

Alignment

AT1G22510.1 RING/U-box protein with domain of unknown function (DUF 1232)

1.0e-24

36.92

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Query:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI
        F   CIMLVW HGS L+PCKCPLCRR I+LLVPSE++   RND  V+ VL+ + TYNR FGG S+GL Q                               
Subjt:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI

Query:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVYITV
                                                                    R+QDLPFLLRRLLRE+++PQR+LPLVIRARVYI +
Subjt:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVYITV

AT1G22510.2 RING/U-box protein with domain of unknown function (DUF 1232)

2.6e-25

35.81

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Query:  MEDSTSLVKQIARTGSALAT---------FSASLFAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTG
        M  ST L   IA TGSA+ +          S       CIMLVW HGS L+PCKCPLCRR I+LLVPSE++   RND  V+ VL+ + TYNR FGG S+G
Subjt:  MEDSTSLVKQIARTGSALAT---------FSASLFAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTG

Query:  LNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILIICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLP
        L Q                                                                                           R+QDLP
Subjt:  LNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILIICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLP

Query:  FLLRRLLRELLNPQRSLPLVIRARVYITV
        FLLRRLLRE+++PQR+LPLVIRARVYI +
Subjt:  FLLRRLLRELLNPQRSLPLVIRARVYITV

AT1G72175.1 RING/U-box protein with domain of unknown function (DUF 1232)

1.0e-24

37.44

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Query:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI
        F   CIMLVW HGS LQPCKCPLCRR I+LLVPSED+   RND  V  VL ++ TYNR FGG S+ L Q                               
Subjt:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGSGKGNQSGKWRRKILI

Query:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVYITV
                                                                    R+QDLPFLLRRLLRE+++PQR+LPLVIRARVYI +
Subjt:  ICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVYITV

AT4G33940.1 RING/U-box superfamily protein

3.1e-10

43.48

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Query:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQ
        +   CI+  W++ +  +PCKCP+C R IT L P E S  +R + EV  VL+ +R YNR F G  TG  Q
Subjt:  FAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQ

Sequences

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CDS sequence

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ATGGAAGATTCAACATCCCTTGTCAAGCAAATTGCTCGCACTGGTTCTGCGCTCGCAACATTTTCTGCTTCCCTGTTTGCAGCAAGGTGTATAATGCTTGTCTGGGATCA
TGGATCACCACTACAACCGTGTAAATGCCCCTTATGTCGCCGACAGATCACTTTATTGGTTCCTTCTGAGGATTCAGCAACGCAGCGAAATGACCCTGAGGTTAATCGTG
TTCTTAACTCTATAAGGACTTATAACCGTCATTTTGGTGGCAATTCAACTGGTTTAAATCAGGTGAAGGAAGACGGCTCCAGCTTGGGGTCAGGAGGGAAGGTTGGGTCA
GGCAAAGGGAATCAATCCGGCAAATGGCGGAGGAAGATCTTGATCATTTGTTGTGGGGTTGTGAGTTTGTCCGCTCTGTCTGGAGCCGCTTCTTTGAGGTTTTCGGGTAT
CAGACTGTGGGCCAGCATCGTTGCTAGGAGTTTCAGAGACCAGAGGGAGATGATTCGGGAGTTCCTCCTCCATCTGTCGTTTCATGAGATGGGGAGGTTTTTATGGCTAG
CTGGGCGACTGCAGGACCTTCCTTTTCTCCTACGGAGGTTGCTTCGGGAACTCCTCAATCCACAGAGATCTCTTCCTCTTGTCATTAGAGCACGTGTTTACATTACAGTT
AAGTGA

mRNA sequence

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Protein sequence

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MEDSTSLVKQIARTGSALATFSASLFAARCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEDSATQRNDPEVNRVLNSIRTYNRHFGGNSTGLNQVKEDGSSLGSGGKVGS
GKGNQSGKWRRKILIICCGVVSLSALSGAASLRFSGIRLWASIVARSFRDQREMIREFLLHLSFHEMGRFLWLAGRLQDLPFLLRRLLRELLNPQRSLPLVIRARVYITV
K

Spg020657 (gene) of Sponge gourd (cylindrica) v1 genome