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Spg020703 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020703
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold10:26083800..26087640
RNA-Seq ExpressionSpg020703
SyntenySpg020703
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK08698.1 reverse transcriptase [Cucumis melo var. makuwa]5.8e-0441.98Show/hide
Query:  GESGQFADSIVLPFQGQDRMGAGNITVQDGIHSFPYWGPLGPTGPLGWGERHLIHSPTLREFPSRLPLDSHQSLASRSLRV
        GESGQ ADSI L F GQDR+G      QDGIHSFP   PLG         R ++     R   SR+      SL + S ++
Subjt:  GESGQFADSIVLPFQGQDRMGAGNITVQDGIHSFPYWGPLGPTGPLGWGERHLIHSPTLREFPSRLPLDSHQSLASRSLRV
TrEMBL top hitse value%identityAlignment
A0A5D3CBX3 Reverse transcriptase2.8e-0441.98Show/hide
Query:  GESGQFADSIVLPFQGQDRMGAGNITVQDGIHSFPYWGPLGPTGPLGWGERHLIHSPTLREFPSRLPLDSHQSLASRSLRV
        GESGQ ADSI L F GQDR+G      QDGIHSFP   PLG         R ++     R   SR+      SL + S ++
Subjt:  GESGQFADSIVLPFQGQDRMGAGNITVQDGIHSFPYWGPLGPTGPLGWGERHLIHSPTLREFPSRLPLDSHQSLASRSLRV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAGTCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTA
TTGGGGTCCATTAGGTCCCACTGGACCCCTGGGGTGGGGTGAAAGGCATCTCATTCATTCTCCTACTCTCAGAGAATTCCCCTCAAGGCTTCCTCTTGACTCCCACCAGT
CTCTTGCCTCTAGAAGTCTCAGAGTCATATCGGTATTAGGGGAGTACATTTGGTTAGATTTTAGCCCTAATTTTCACTTGAGACCTTTGGTGGGAGCTGAAGTAAGGCCA
AGGAGCAGGAATCAAGCGAGAAGACGAGGAGATCGTGACGGGGACGAGACTTTGCGAGGAGGATGCGCCCGCAAGAGGAGAGTAAAGGAAGAATTGCGTCAGAGATGTGG
CTGCAATTGGACTTTCCGACAAAATTTCGAGATTCGCAGGATCTTCATAGAATCTTCCAAAAATCCCCAATCTGGTATCAAATCTCTAAAGACTGTGAATTCTTACCTTC
CAAAGCCTTCTCACATTGATCTTGACAGCCAATCTCACCTTCCAAGGTCTATAAAAGGGGACCAAGATGCAAGAAGCAAATTATATGACCTAAGATTCTACTTGGGGGTT
CAAATATGTGGATTCCTTGAGAAGAAGAATGTCCCGCCTATGCAAAAGCAACTTTGCTCCCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAGTCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTA
TTGGGGTCCATTAGGTCCCACTGGACCCCTGGGGTGGGGTGAAAGGCATCTCATTCATTCTCCTACTCTCAGAGAATTCCCCTCAAGGCTTCCTCTTGACTCCCACCAGT
CTCTTGCCTCTAGAAGTCTCAGAGTCATATCGGTATTAGGGGAGTACATTTGGTTAGATTTTAGCCCTAATTTTCACTTGAGACCTTTGGTGGGAGCTGAAGTAAGGCCA
AGGAGCAGGAATCAAGCGAGAAGACGAGGAGATCGTGACGGGGACGAGACTTTGCGAGGAGGATGCGCCCGCAAGAGGAGAGTAAAGGAAGAATTGCGTCAGAGATGTGG
CTGCAATTGGACTTTCCGACAAAATTTCGAGATTCGCAGGATCTTCATAGAATCTTCCAAAAATCCCCAATCTGGTATCAAATCTCTAAAGACTGTGAATTCTTACCTTC
CAAAGCCTTCTCACATTGATCTTGACAGCCAATCTCACCTTCCAAGGTCTATAAAAGGGGACCAAGATGCAAGAAGCAAATTATATGACCTAAGATTCTACTTGGGGGTT
CAAATATGTGGATTCCTTGAGAAGAAGAATGTCCCGCCTATGCAAAAGCAACTTTGCTCCCTCTAG
Protein sequenceShow/hide protein sequence
MGESGQFADSIVLPFQGQDRMGAGNITVQDGIHSFPYWGPLGPTGPLGWGERHLIHSPTLREFPSRLPLDSHQSLASRSLRVISVLGEYIWLDFSPNFHLRPLVGAEVRP
RSRNQARRRGDRDGDETLRGGCARKRRVKEELRQRCGCNWTFRQNFEIRRIFIESSKNPQSGIKSLKTVNSYLPKPSHIDLDSQSHLPRSIKGDQDARSKLYDLRFYLGV
QICGFLEKKNVPPMQKQLCSL