| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0040194.1 gag/pol protein [Cucumis melo var. makuwa] | 2.3e-20 | 57.01 | Show/hide |
Query: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIESFCIVNVF---------------GQQGSLEEDDVCWLHAISLTKLAGSLGGGVTN
PL TLSVLRDNDAVVEIELP+PDTLPTSAESS S+SSTW+ELY ES + +F G G + DDVCWLHAI K AG GGGVT
Subjt: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIESFCIVNVF---------------GQQGSLEEDDVCWLHAISLTKLAGSLGGGVTN
Query: RPKARKT
+T
Subjt: RPKARKT
|
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| KAA0062409.1 reverse transcriptase [Cucumis melo var. makuwa] | 5.2e-20 | 57.55 | Show/hide |
Query: TGYIPLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIES-----FCIVN-------------VFGQQGSLEEDDVCWLHAISLTKLAGS
T PL TLSVLRDNDAVVEIELPVPDTLPTSAESS S+SSTW+ELY ES FC + G G + DDVCWLHA+ K G
Subjt: TGYIPLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIES-----FCIVN-------------VFGQQGSLEEDDVCWLHAISLTKLAGS
Query: LGGGVT
GGGVT
Subjt: LGGGVT
|
|
| KAA0066851.1 reverse transcriptase [Cucumis melo var. makuwa] | 3.8e-23 | 67.03 | Show/hide |
Query: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIESFCIVNVFGQQGSLEEDDVCWLHAISLTKLAGSLGGGVTNRPKARK
PL TLSVLRDNDAVVEIELPVPDTLPTSAESS S+SSTW+ELY+E F V +F G + EDDVCWLHA+ K AG GGGV P +++
Subjt: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIESFCIVNVFGQQGSLEEDDVCWLHAISLTKLAGSLGGGVTNRPKARK
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| TYK25935.1 gag/pol protein [Cucumis melo var. makuwa] | 2.3e-20 | 57.01 | Show/hide |
Query: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIESFCIVNVF---------------GQQGSLEEDDVCWLHAISLTKLAGSLGGGVTN
PL TLSVLRDNDAVVEIELP+PDTLPTSAESS S+SSTW+ELY ES + +F G G + DDVCWLHAI K AG GGGVT
Subjt: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIESFCIVNVF---------------GQQGSLEEDDVCWLHAISLTKLAGSLGGGVTN
Query: RPKARKT
+T
Subjt: RPKARKT
|
|
| TYK27998.1 reverse transcriptase [Cucumis melo var. makuwa] | 3.8e-23 | 67.03 | Show/hide |
Query: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIESFCIVNVFGQQGSLEEDDVCWLHAISLTKLAGSLGGGVTNRPKARK
PL TLSVLRDNDAVVEIELPVPDTLPTSAESS S+SSTW+ELY+E F V +F G + EDDVCWLHA+ K AG GGGV P +++
Subjt: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIESFCIVNVFGQQGSLEEDDVCWLHAISLTKLAGSLGGGVTNRPKARK
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T9P7 Gag/pol protein | 1.1e-20 | 57.01 | Show/hide |
Query: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIESFCIVNVF---------------GQQGSLEEDDVCWLHAISLTKLAGSLGGGVTN
PL TLSVLRDNDAVVEIELP+PDTLPTSAESS S+SSTW+ELY ES + +F G G + DDVCWLHAI K AG GGGVT
Subjt: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIESFCIVNVF---------------GQQGSLEEDDVCWLHAISLTKLAGSLGGGVTN
Query: RPKARKT
+T
Subjt: RPKARKT
|
|
| A0A5A7V9N3 Reverse transcriptase | 2.5e-20 | 57.55 | Show/hide |
Query: TGYIPLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIES-----FCIVN-------------VFGQQGSLEEDDVCWLHAISLTKLAGS
T PL TLSVLRDNDAVVEIELPVPDTLPTSAESS S+SSTW+ELY ES FC + G G + DDVCWLHA+ K G
Subjt: TGYIPLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIES-----FCIVN-------------VFGQQGSLEEDDVCWLHAISLTKLAGS
Query: LGGGVT
GGGVT
Subjt: LGGGVT
|
|
| A0A5A7VMG9 Reverse transcriptase | 1.9e-23 | 67.03 | Show/hide |
Query: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIESFCIVNVFGQQGSLEEDDVCWLHAISLTKLAGSLGGGVTNRPKARK
PL TLSVLRDNDAVVEIELPVPDTLPTSAESS S+SSTW+ELY+E F V +F G + EDDVCWLHA+ K AG GGGV P +++
Subjt: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIESFCIVNVFGQQGSLEEDDVCWLHAISLTKLAGSLGGGVTNRPKARK
|
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| A0A5D3DR18 Gag/pol protein | 1.1e-20 | 57.01 | Show/hide |
Query: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIESFCIVNVF---------------GQQGSLEEDDVCWLHAISLTKLAGSLGGGVTN
PL TLSVLRDNDAVVEIELP+PDTLPTSAESS S+SSTW+ELY ES + +F G G + DDVCWLHAI K AG GGGVT
Subjt: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIESFCIVNVF---------------GQQGSLEEDDVCWLHAISLTKLAGSLGGGVTN
Query: RPKARKT
+T
Subjt: RPKARKT
|
|
| A0A5D3DX39 Reverse transcriptase | 1.9e-23 | 67.03 | Show/hide |
Query: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIESFCIVNVFGQQGSLEEDDVCWLHAISLTKLAGSLGGGVTNRPKARK
PL TLSVLRDNDAVVEIELPVPDTLPTSAESS S+SSTW+ELY+E F V +F G + EDDVCWLHA+ K AG GGGV P +++
Subjt: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSSSSSSTWVELYIESFCIVNVFGQQGSLEEDDVCWLHAISLTKLAGSLGGGVTNRPKARK
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