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Spg020721 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020721
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold10:29187049..29188267
RNA-Seq ExpressionSpg020721
SyntenySpg020721
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]6.6e-1951.3Show/hide
Query:  MSADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGV------------------------AVTPEKRFVPRPEIKTNFQKSLVITE
        +SADQYAMDLGFT VTR  +R+ GI   SP ESSTPPRPSTNL+ PS GV                        AVTP+KRFVPRPEIK+ FQK +V+ +
Subjt:  MSADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGV------------------------AVTPEKRFVPRPEIKTNFQKSLVITE

Query:  PIVEPEFQEFLNDKS
        PI+E E+Q   ++++
Subjt:  PIVEPEFQEFLNDKS

KAA0049709.1 hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]2.6e-2353.06Show/hide
Query:  MSADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGVAVTPEKRFVPRPEIKTNFQKSLVITEPIVEPEFQEFLNDKSKLLATLAQT
        MSADQYAMDLGFT VTRSR+R+  I   SP ESSTPP+PSTNL+ PSGGV    + R    P                V P+       +SKLLA LAQ 
Subjt:  MSADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGVAVTPEKRFVPRPEIKTNFQKSLVITEPIVEPEFQEFLNDKSKLLATLAQT

Query:  TSDADFQRILQ--MAASTTSESPTSSAQGEENEPD--YDLDDPYLDS
        T+DADFQR+L   + AS++S+SP+SS Q +E + D  YDLDDPYLDS
Subjt:  TSDADFQRILQ--MAASTTSESPTSSAQGEENEPD--YDLDDPYLDS

KAA0066384.1 hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa]4.1e-2143.71Show/hide
Query:  ADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGV------------------------AVTPEKRFVPRPEIKTNFQKSLVITEPI
        ADQYAM++GFT VTRSR+R+  I   S  ES+TPPRPS NL+ PS GV                        AVTP+KRFVPRPEIK+ FQK +V+ +PI
Subjt:  ADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGV------------------------AVTPEKRFVPRPEIKTNFQKSLVITEPI

Query:  VEPEFQEFLNDKSKLLATLAQTTSDADFQRILQMAASTTSESPTSSAQGEEN--EPDYDLDDPYLDS
        +E E+                           Q+ AS++S+SP+SS Q +E   +P+YDLDDP+LDS
Subjt:  VEPEFQEFLNDKSKLLATLAQTTSDADFQRILQMAASTTSESPTSSAQGEEN--EPDYDLDDPYLDS

KAA0066421.1 hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa]5.1e-1951.3Show/hide
Query:  MSADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGV------------------------AVTPEKRFVPRPEIKTNFQKSLVITE
        MSADQYAMDLGFT VTRSR+R+  I   S  ESSTPPRPS NL+ P GG                          VTP+KRFVPRPEIK+ FQKS+V+ +
Subjt:  MSADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGV------------------------AVTPEKRFVPRPEIKTNFQKSLVITE

Query:  PIVEPEFQEFLNDKS
         I+EPE+Q    +K+
Subjt:  PIVEPEFQEFLNDKS

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]2.9e-3048.13Show/hide
Query:  MSADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGV------------------------AVTPEKRFVPRPEIKTNFQKSLVITE
        MS DQYAMDLG+T V +SR+++ GI   SPMESSTPPRPS NL+ P G V                        AVTP+K+FVPR EIK+ FQK +VI +
Subjt:  MSADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGV------------------------AVTPEKRFVPRPEIKTNFQKSLVITE

Query:  PIVEPEFQ--------------EFLNDKSKLLATLAQTTSDADFQRILQMAASTTSESPTSSAQGEENEP----DYDLDDPYLDSQP
        PI+E E+Q              +FLNDK K LA L Q T DADFQR+L  A +T+S S  + +  +E+E     +YDLDDP+LDSQP
Subjt:  PIVEPEFQ--------------EFLNDKSKLLATLAQTTSDADFQRILQMAASTTSESPTSSAQGEENEP----DYDLDDPYLDSQP

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein3.2e-1951.3Show/hide
Query:  MSADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGV------------------------AVTPEKRFVPRPEIKTNFQKSLVITE
        +SADQYAMDLGFT VTR  +R+ GI   SP ESSTPPRPSTNL+ PS GV                        AVTP+KRFVPRPEIK+ FQK +V+ +
Subjt:  MSADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGV------------------------AVTPEKRFVPRPEIKTNFQKSLVITE

Query:  PIVEPEFQEFLNDKS
        PI+E E+Q   ++++
Subjt:  PIVEPEFQEFLNDKS

A0A5A7U8A0 Uncharacterized protein1.3e-2353.06Show/hide
Query:  MSADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGVAVTPEKRFVPRPEIKTNFQKSLVITEPIVEPEFQEFLNDKSKLLATLAQT
        MSADQYAMDLGFT VTRSR+R+  I   SP ESSTPP+PSTNL+ PSGGV    + R    P                V P+       +SKLLA LAQ 
Subjt:  MSADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGVAVTPEKRFVPRPEIKTNFQKSLVITEPIVEPEFQEFLNDKSKLLATLAQT

Query:  TSDADFQRILQ--MAASTTSESPTSSAQGEENEPD--YDLDDPYLDS
        T+DADFQR+L   + AS++S+SP+SS Q +E + D  YDLDDPYLDS
Subjt:  TSDADFQRILQ--MAASTTSESPTSSAQGEENEPD--YDLDDPYLDS

A0A5D3BI61 Uncharacterized protein1.4e-3048.13Show/hide
Query:  MSADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGV------------------------AVTPEKRFVPRPEIKTNFQKSLVITE
        MS DQYAMDLG+T V +SR+++ GI   SPMESSTPPRPS NL+ P G V                        AVTP+K+FVPR EIK+ FQK +VI +
Subjt:  MSADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGV------------------------AVTPEKRFVPRPEIKTNFQKSLVITE

Query:  PIVEPEFQ--------------EFLNDKSKLLATLAQTTSDADFQRILQMAASTTSESPTSSAQGEENEP----DYDLDDPYLDSQP
        PI+E E+Q              +FLNDK K LA L Q T DADFQR+L  A +T+S S  + +  +E+E     +YDLDDP+LDSQP
Subjt:  PIVEPEFQ--------------EFLNDKSKLLATLAQTTSDADFQRILQMAASTTSESPTSSAQGEENEP----DYDLDDPYLDSQP

A0A5D3BM67 Uncharacterized protein2.4e-1951.3Show/hide
Query:  MSADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGV------------------------AVTPEKRFVPRPEIKTNFQKSLVITE
        MSADQYAMDLGFT VTRSR+R+  I   S  ESSTPPRPS NL+ P GG                          VTP+KRFVPRPEIK+ FQKS+V+ +
Subjt:  MSADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGV------------------------AVTPEKRFVPRPEIKTNFQKSLVITE

Query:  PIVEPEFQEFLNDKS
         I+EPE+Q    +K+
Subjt:  PIVEPEFQEFLNDKS

A0A5D3BPD3 Uncharacterized protein2.0e-2143.71Show/hide
Query:  ADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGV------------------------AVTPEKRFVPRPEIKTNFQKSLVITEPI
        ADQYAM++GFT VTRSR+R+  I   S  ES+TPPRPS NL+ PS GV                        AVTP+KRFVPRPEIK+ FQK +V+ +PI
Subjt:  ADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGV------------------------AVTPEKRFVPRPEIKTNFQKSLVITEPI

Query:  VEPEFQEFLNDKSKLLATLAQTTSDADFQRILQMAASTTSESPTSSAQGEEN--EPDYDLDDPYLDS
        +E E+                           Q+ AS++S+SP+SS Q +E   +P+YDLDDP+LDS
Subjt:  VEPEFQEFLNDKSKLLATLAQTTSDADFQRILQMAASTTSESPTSSAQGEEN--EPDYDLDDPYLDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCTGATCAATACGCTATGGATTTAGGGTTTACACCGGTAACCCGATCTAGAGCAAGAACGGGCGGCATAAGTCCAATGTCTCCAATGGAGTCATCCACTCCACC
AAGGCCTTCGACCAACCTAGTCTGTCCTTCTGGCGGAGTTGCTGTTACACCAGAAAAGAGGTTTGTACCTCGCCCTGAGATCAAAACCAATTTTCAAAAATCTCTGGTTA
TCACTGAACCCATCGTTGAACCAGAATTTCAAGAATTCCTTAATGACAAGTCTAAACTTCTGGCGACCCTTGCACAGACAACCTCTGATGCAGACTTCCAGAGGATTCTA
CAAATGGCAGCCTCCACCACAAGCGAGTCACCTACTTCTTCTGCACAAGGAGAAGAGAACGAACCAGACTACGATCTAGATGATCCATACCTCGACTCACAACCCATGTG
A
mRNA sequenceShow/hide mRNA sequence
ATGAGTGCTGATCAATACGCTATGGATTTAGGGTTTACACCGGTAACCCGATCTAGAGCAAGAACGGGCGGCATAAGTCCAATGTCTCCAATGGAGTCATCCACTCCACC
AAGGCCTTCGACCAACCTAGTCTGTCCTTCTGGCGGAGTTGCTGTTACACCAGAAAAGAGGTTTGTACCTCGCCCTGAGATCAAAACCAATTTTCAAAAATCTCTGGTTA
TCACTGAACCCATCGTTGAACCAGAATTTCAAGAATTCCTTAATGACAAGTCTAAACTTCTGGCGACCCTTGCACAGACAACCTCTGATGCAGACTTCCAGAGGATTCTA
CAAATGGCAGCCTCCACCACAAGCGAGTCACCTACTTCTTCTGCACAAGGAGAAGAGAACGAACCAGACTACGATCTAGATGATCCATACCTCGACTCACAACCCATGTG
A
Protein sequenceShow/hide protein sequence
MSADQYAMDLGFTPVTRSRARTGGISPMSPMESSTPPRPSTNLVCPSGGVAVTPEKRFVPRPEIKTNFQKSLVITEPIVEPEFQEFLNDKSKLLATLAQTTSDADFQRIL
QMAASTTSESPTSSAQGEENEPDYDLDDPYLDSQPM