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Spg020750 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020750
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein CROWDED NUCLEI 1-like isoform X1
Genome locationscaffold10:26890083..26892206
RNA-Seq ExpressionSpg020750
SyntenySpg020750
Gene Ontology termsGO:0006997 - nucleus organization (biological process)
GO:0005652 - nuclear lamina (cellular component)
InterPro domainsIPR040418 - Protein crowded nuclei


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022930031.1 protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita moschata]1.4e-4878.99Show/hide
Query:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGS
        G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVRTIYRSEDRVVQFESLR PEDNASME LV ++DLCDEVN +
Subjt:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGS

Query:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT
        SEYEDEDG++IDD EDEYDEEQPDA+SIGKKIWTFFTT
Subjt:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT

XP_022993965.1 protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita maxima]2.8e-4979.71Show/hide
Query:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGS
        G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVRTIYRSEDRVVQFESLR PEDNASME LVA++DLCDEVN +
Subjt:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGS

Query:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT
        SEYEDEDG++IDD EDEYDEEQPDA+SIGKKIWTFFTT
Subjt:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT

XP_022993992.1 protein CROWDED NUCLEI 1-like isoform X2 [Cucurbita maxima]2.8e-4979.71Show/hide
Query:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGS
        G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVRTIYRSEDRVVQFESLR PEDNASME LVA++DLCDEVN +
Subjt:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGS

Query:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT
        SEYEDEDG++IDD EDEYDEEQPDA+SIGKKIWTFFTT
Subjt:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT

XP_023530139.1 protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita pepo subsp. pepo]8.3e-4978.99Show/hide
Query:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGS
        G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVRTIYRSEDRVV+FESLR PEDNASME LVA++DLCDEVN +
Subjt:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGS

Query:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT
        SEYEDEDG++IDD EDEYDEEQPDA+SIGKKIWTFFTT
Subjt:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT

XP_023530151.1 protein CROWDED NUCLEI 1-like isoform X2 [Cucurbita pepo subsp. pepo]8.3e-4978.99Show/hide
Query:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGS
        G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVRTIYRSEDRVV+FESLR PEDNASME LVA++DLCDEVN +
Subjt:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGS

Query:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT
        SEYEDEDG++IDD EDEYDEEQPDA+SIGKKIWTFFTT
Subjt:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT

TrEMBL top hitse value%identityAlignment
A0A5D3BPV3 Protein CROWDED NUCLEI 32.9e-3970.71Show/hide
Query:  AGKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLV--AVNDLCDEV
        AGKASATQVS NLTTVMEKENE               TP   +V GENG+K DSV++TTVRTIY SEDRVV+FES RT EDNA ME LV   VNDLC E 
Subjt:  AGKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLV--AVNDLCDEV

Query:  NGSSEYEDEDGSVIDDEDEYDEEQPDARSIGKKIWTFFTT
        NGSSEYEDED S++DDEDEYDEEQPD  SIGKKIWTFFTT
Subjt:  NGSSEYEDEDGSVIDDEDEYDEEQPDARSIGKKIWTFFTT

A0A6J1EPS4 protein CROWDED NUCLEI 1-like isoform X16.8e-4978.99Show/hide
Query:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGS
        G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVRTIYRSEDRVVQFESLR PEDNASME LV ++DLCDEVN +
Subjt:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGS

Query:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT
        SEYEDEDG++IDD EDEYDEEQPDA+SIGKKIWTFFTT
Subjt:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT

A0A6J1ETW4 protein CROWDED NUCLEI 1-like isoform X26.8e-4978.99Show/hide
Query:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGS
        G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVRTIYRSEDRVVQFESLR PEDNASME LV ++DLCDEVN +
Subjt:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGS

Query:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT
        SEYEDEDG++IDD EDEYDEEQPDA+SIGKKIWTFFTT
Subjt:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT

A0A6J1JUG6 protein CROWDED NUCLEI 1-like isoform X21.4e-4979.71Show/hide
Query:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGS
        G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVRTIYRSEDRVVQFESLR PEDNASME LVA++DLCDEVN +
Subjt:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGS

Query:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT
        SEYEDEDG++IDD EDEYDEEQPDA+SIGKKIWTFFTT
Subjt:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT

A0A6J1K004 protein CROWDED NUCLEI 1-like isoform X11.4e-4979.71Show/hide
Query:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGS
        G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVRTIYRSEDRVVQFESLR PEDNASME LVA++DLCDEVN +
Subjt:  GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGS

Query:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT
        SEYEDEDG++IDD EDEYDEEQPDA+SIGKKIWTFFTT
Subjt:  SEYEDEDGSVIDD-EDEYDEEQPDARSIGKKIWTFFTT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAAATTTCGAAGAAGATTAGGTTCTTTATCTGTGCAGGCAAAGCTAGTGCAACTCAGGTTTCAGCGAACCTGACAACTGTGATGGAGAAAGAAAACGAA
GGAATCTCGACAGAGAAAGTGGAACCAAGTAGGGAGGTTCTTATAACCCCTTCATTGAGAAGTGTTGATGGGGAGAATGGAAAAAAAACAGACTCGGTGCAGCTT
ACAACGGTCAGAACTATCTATCGTTCCGAGGATAGAGTAGTTCAGTTTGAATCGCTGAGAACTCCCGAAGATAATGCTTCCATGGAGAACTTGGTCGCAGTCAAT
GATTTGTGCGATGAAGTGAATGGTTCTTCTGAATATGAAGATGAAGATGGAAGTGTAATTGATGATGAAGATGAGTACGATGAAGAGCAGCCTGATGCGAGATCG
ATCGGAAAGAAGATTTGGACCTTTTTCACAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAAATTTCGAAGAAGATTAGGTTCTTTATCTGTGCAGGCAAAGCTAGTGCAACTCAGGTTTCAGCGAACCTGACAACTGTGATGGAGAAAGAAAACGAA
GGAATCTCGACAGAGAAAGTGGAACCAAGTAGGGAGGTTCTTATAACCCCTTCATTGAGAAGTGTTGATGGGGAGAATGGAAAAAAAACAGACTCGGTGCAGCTT
ACAACGGTCAGAACTATCTATCGTTCCGAGGATAGAGTAGTTCAGTTTGAATCGCTGAGAACTCCCGAAGATAATGCTTCCATGGAGAACTTGGTCGCAGTCAAT
GATTTGTGCGATGAAGTGAATGGTTCTTCTGAATATGAAGATGAAGATGGAAGTGTAATTGATGATGAAGATGAGTACGATGAAGAGCAGCCTGATGCGAGATCG
ATCGGAAAGAAGATTTGGACCTTTTTCACAACTTAA
Protein sequenceShow/hide protein sequence
MVKISKKIRFFICAGKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVN
DLCDEVNGSSEYEDEDGSVIDDEDEYDEEQPDARSIGKKIWTFFTT