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Spg020758 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020758
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold10:25270294..25271543
RNA-Seq ExpressionSpg020758
SyntenySpg020758
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]9.4e-1852.75Show/hide
Query:  MGAEVPQKFKIPTF-QYDKKKDPVQHLKAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQRKP
        M  +VP KFK+P   +YD   DP+ HL  Y  W D +G  EA RCR F+ TLTG  R WF ++ RKSI SFKELARAF TQF G  ++ +P
Subjt:  MGAEVPQKFKIPTF-QYDKKKDPVQHLKAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQRKP

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]1.4e-1852.13Show/hide
Query:  DDIMGAEVPQKFKIPTF-QYDKKKDPVQHLKAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQRKP
        ++IM  +VP KFK+PT  Q+D   D V HL AY+ WMD +G +EA +CR F+ TL+G AR WF ++ R SI SFK LA+AF TQF+G R + +P
Subjt:  DDIMGAEVPQKFKIPTF-QYDKKKDPVQHLKAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQRKP

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]1.0e-1654.76Show/hide
Query:  KFKIPTF-QYDKKKDPVQHLKAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQRKP
        KFK+P   +YD   DP+ HL AY+ W D +   EA RCR F+ TLTG AR WF ++ R SI SFKELA AF TQF+G R + KP
Subjt:  KFKIPTF-QYDKKKDPVQHLKAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQRKP

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.6e-2840.59Show/hide
Query:  LCRDPKKGKGMADEEVGDSASVTSRMPSLEDNWTYK----EPRPSHKKVRRSSPSRPKQGREQELSKWL-----KEEDSPYNSYKRTYNE----DIEEML
        L RDPKKGKG  + +  +S +       +  N   +    +PR + K+ +  +P+  K   +   S+ +     K  D P +S KR  ++    D+EE+L
Subjt:  LCRDPKKGKGMADEEVGDSASVTSRMPSLEDNWTYK----EPRPSHKKVRRSSPSRPKQGREQELSKWL-----KEEDSPYNSYKRTYNE----DIEEML

Query:  GEMDPHFTDDIMGAEVPQKFKIPTF-QYDKKKDPVQHLKAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQR
         + D  FT++IM  +VP KFK+PT  Q+D   DPV HL AY+ WMD +G +EA RCR F+ TL G AR WF ++ R SI SFK LARAF TQF+G R + 
Subjt:  GEMDPHFTDDIMGAEVPQKFKIPTF-QYDKKKDPVQHLKAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQR

Query:  KP
        +P
Subjt:  KP

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]2.2e-2243.67Show/hide
Query:  RPSHKKVRRSSPSRPKQGREQE---LSKWLKEEDSPYNSYKRTYNE----DIEEMLGEMDPHFTDDIMGAEVPQKFKIPTFQ-YDKKKDPVQHLKAYQTW
        +  HK +  +        R  E   L+K  K  D P +S KR   +    D+EE+LG+ D  FT++IM  +VP KFK+PT + +D   +PV HL AY+ W
Subjt:  RPSHKKVRRSSPSRPKQGREQE---LSKWLKEEDSPYNSYKRTYNE----DIEEMLGEMDPHFTDDIMGAEVPQKFKIPTFQ-YDKKKDPVQHLKAYQTW

Query:  MDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQRKP
        MD +G ++A RCR F+ TL G AR WF ++ R SI SFK LARAF TQF+G R + +P
Subjt:  MDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQRKP

TrEMBL top hitse value%identityAlignment
A0A4S5BWZ5 Retrotrans_gag domain-containing protein (Fragment)2.5e-1642.06Show/hide
Query:  IEEMLGEMDPHFTDDIMGAEVPQKFKIPTFQ-YDKKKDPVQHLKAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLG
        +E++L +    FT+++    +P+KFK+P    Y   +DPV+HL  ++  MD H   E   CRAF LTL+G AR WF K+P  SI  F++L R F TQF+ 
Subjt:  IEEMLGEMDPHFTDDIMGAEVPQKFKIPTFQ-YDKKKDPVQHLKAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLG

Query:  ARDQRKP
         R ++KP
Subjt:  ARDQRKP

A0A6J1D3B7 uncharacterized protein LOC1110166194.5e-1852.75Show/hide
Query:  MGAEVPQKFKIPTF-QYDKKKDPVQHLKAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQRKP
        M  +VP KFK+P   +YD   DP+ HL  Y  W D +G  EA RCR F+ TLTG  R WF ++ RKSI SFKELARAF TQF G  ++ +P
Subjt:  MGAEVPQKFKIPTF-QYDKKKDPVQHLKAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQRKP

A0A6J1D7D2 uncharacterized protein LOC1110183077.0e-1952.13Show/hide
Query:  DDIMGAEVPQKFKIPTF-QYDKKKDPVQHLKAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQRKP
        ++IM  +VP KFK+PT  Q+D   D V HL AY+ WMD +G +EA +CR F+ TL+G AR WF ++ R SI SFK LA+AF TQF+G R + +P
Subjt:  DDIMGAEVPQKFKIPTF-QYDKKKDPVQHLKAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQRKP

A0A6J1DWY0 uncharacterized protein LOC1110252931.3e-2840.59Show/hide
Query:  LCRDPKKGKGMADEEVGDSASVTSRMPSLEDNWTYK----EPRPSHKKVRRSSPSRPKQGREQELSKWL-----KEEDSPYNSYKRTYNE----DIEEML
        L RDPKKGKG  + +  +S +       +  N   +    +PR + K+ +  +P+  K   +   S+ +     K  D P +S KR  ++    D+EE+L
Subjt:  LCRDPKKGKGMADEEVGDSASVTSRMPSLEDNWTYK----EPRPSHKKVRRSSPSRPKQGREQELSKWL-----KEEDSPYNSYKRTYNE----DIEEML

Query:  GEMDPHFTDDIMGAEVPQKFKIPTF-QYDKKKDPVQHLKAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQR
         + D  FT++IM  +VP KFK+PT  Q+D   DPV HL AY+ WMD +G +EA RCR F+ TL G AR WF ++ R SI SFK LARAF TQF+G R + 
Subjt:  GEMDPHFTDDIMGAEVPQKFKIPTF-QYDKKKDPVQHLKAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQR

Query:  KP
        +P
Subjt:  KP

A0A6J1E1E7 uncharacterized protein LOC1110255481.0e-2243.67Show/hide
Query:  RPSHKKVRRSSPSRPKQGREQE---LSKWLKEEDSPYNSYKRTYNE----DIEEMLGEMDPHFTDDIMGAEVPQKFKIPTFQ-YDKKKDPVQHLKAYQTW
        +  HK +  +        R  E   L+K  K  D P +S KR   +    D+EE+LG+ D  FT++IM  +VP KFK+PT + +D   +PV HL AY+ W
Subjt:  RPSHKKVRRSSPSRPKQGREQE---LSKWLKEEDSPYNSYKRTYNE----DIEEMLGEMDPHFTDDIMGAEVPQKFKIPTFQ-YDKKKDPVQHLKAYQTW

Query:  MDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQRKP
        MD +G ++A RCR F+ TL G AR WF ++ R SI SFK LARAF TQF+G R + +P
Subjt:  MDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQRKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAGGCCGAGCTCGGTCGCCTCCGTTTGGTCCCTACTGCCTCTGGCCGCCCTGGTTCCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAG
CATGAGCAGTCGGTGTGGCAAGCACCACACCGGTGTGCAATGTTTGCTGGTCTTGCAGGTCACGTCTTCCCCTTCTCATAAAAATTTACCGTTGGTGGCACGTGAAGGAC
AGATGGAGTGCAACAGTGAAGCAGCAGCAGGAGAGGTATACCACCAGGCTCGACTCCAAGCCCAAGAAGCCGAAATAGCAGCACTCAAAGGAAGGATGGATGATATGGGA
CAGAATCTTATAGAAATTCTGAGTTTATTGAAGAAACCCAAGCACCCGGGGTACAAGGATGATCAGCTGTGCAGGGACCCTAAAAAAGGAAAAGGAATGGCCGACGAGGA
GGTGGGAGATTCAGCAAGTGTCACGAGCAGGATGCCGAGCTTAGAAGATAACTGGACTTATAAAGAACCCAGGCCTAGTCACAAAAAAGTTCGCAGAAGCTCGCCATCGA
GGCCAAAGCAAGGGCGCGAGCAAGAGCTGTCCAAATGGTTGAAGGAGGAGGATAGTCCTTACAACTCATACAAGAGGACATATAATGAGGATATAGAAGAAATGTTAGGA
GAGATGGATCCACACTTCACAGACGACATTATGGGGGCTGAAGTGCCGCAGAAGTTCAAGATACCCACCTTCCAATACGACAAAAAGAAAGATCCGGTCCAGCACTTGAA
GGCATACCAAACCTGGATGGACTTCCACGGGGCTAATGAGGCAACCAGATGTCGAGCCTTCGCACTTACCCTAACAGGCTTGGCTAGACAATGGTTTGGCAAAATACCCC
GGAAGTCCATATGGTCATTCAAAGAGTTAGCACGAGCCTTCGCCACACAGTTTTTGGGGGCTCGAGATCAACGAAAGCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAGGCCGAGCTCGGTCGCCTCCGTTTGGTCCCTACTGCCTCTGGCCGCCCTGGTTCCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAG
CATGAGCAGTCGGTGTGGCAAGCACCACACCGGTGTGCAATGTTTGCTGGTCTTGCAGGTCACGTCTTCCCCTTCTCATAAAAATTTACCGTTGGTGGCACGTGAAGGAC
AGATGGAGTGCAACAGTGAAGCAGCAGCAGGAGAGGTATACCACCAGGCTCGACTCCAAGCCCAAGAAGCCGAAATAGCAGCACTCAAAGGAAGGATGGATGATATGGGA
CAGAATCTTATAGAAATTCTGAGTTTATTGAAGAAACCCAAGCACCCGGGGTACAAGGATGATCAGCTGTGCAGGGACCCTAAAAAAGGAAAAGGAATGGCCGACGAGGA
GGTGGGAGATTCAGCAAGTGTCACGAGCAGGATGCCGAGCTTAGAAGATAACTGGACTTATAAAGAACCCAGGCCTAGTCACAAAAAAGTTCGCAGAAGCTCGCCATCGA
GGCCAAAGCAAGGGCGCGAGCAAGAGCTGTCCAAATGGTTGAAGGAGGAGGATAGTCCTTACAACTCATACAAGAGGACATATAATGAGGATATAGAAGAAATGTTAGGA
GAGATGGATCCACACTTCACAGACGACATTATGGGGGCTGAAGTGCCGCAGAAGTTCAAGATACCCACCTTCCAATACGACAAAAAGAAAGATCCGGTCCAGCACTTGAA
GGCATACCAAACCTGGATGGACTTCCACGGGGCTAATGAGGCAACCAGATGTCGAGCCTTCGCACTTACCCTAACAGGCTTGGCTAGACAATGGTTTGGCAAAATACCCC
GGAAGTCCATATGGTCATTCAAAGAGTTAGCACGAGCCTTCGCCACACAGTTTTTGGGGGCTCGAGATCAACGAAAGCCATAG
Protein sequenceShow/hide protein sequence
MAEAELGRLRLVPTASGRPGSAWFVPKRLRIPKNPRSMSSRCGKHHTGVQCLLVLQVTSSPSHKNLPLVAREGQMECNSEAAAGEVYHQARLQAQEAEIAALKGRMDDMG
QNLIEILSLLKKPKHPGYKDDQLCRDPKKGKGMADEEVGDSASVTSRMPSLEDNWTYKEPRPSHKKVRRSSPSRPKQGREQELSKWLKEEDSPYNSYKRTYNEDIEEMLG
EMDPHFTDDIMGAEVPQKFKIPTFQYDKKKDPVQHLKAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKIPRKSIWSFKELARAFATQFLGARDQRKP