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Spg020779 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020779
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationscaffold10:29472860..29474009
RNA-Seq ExpressionSpg020779
SyntenySpg020779
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB49850.1 hypothetical protein L484_000844 [Morus notabilis]3.9e-1424.6Show/hide
Query:  RDFLNEKGF---STRAGALPEFVTRFISQYKWQEFCAHPQEAVVPLVREFFAGLRE----------------------------------ESISMAV---
        R+ + EKGF    +     P F++  I    WQ FC HP + +VPLV+EF+A L+                                   E I+ A+   
Subjt:  RDFLNEKGF---STRAGALPEFVTRFISQYKWQEFCAHPQEAVVPLVREFFAGLRE----------------------------------ESISMAV---

Query:  MKDALKLVANKGVQWKKSQTKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIG---------------------SIIRE
        +K+ LK +A  G QW  S     T    +L+P + VW HF+ +RL+ +TH  TIS  R +LLY ++ G  IN+G                     S+I E
Subjt:  MKDALKLVANKGVQWKKSQTKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIG---------------------SIIRE

Query:  EILRVKIVPGKDEERHFFKPTSDLSLIGKLQQNSIQR--KGKASTSEATPPSGMNLASPPQHTPFSGPWPSSEALAIAYQQLD------QLRDNLRTYWA
          ++  +     E R       DL  I ++     ++  KG+    +  P       +       S  W          QQ +      Q ++ L  +W 
Subjt:  EILRVKIVPGKDEERHFFKPTSDLSLIGKLQQNSIQR--KGKASTSEATPPSGMNLASPPQHTPFSGPWPSSEALAIAYQQLD------QLRDNLRTYWA

Query:  YAKERDEAIREFY
        Y+++RD A+++ +
Subjt:  YAKERDEAIREFY

EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]1.0e-1432.1Show/hide
Query:  PEFVTRFISQYKWQEFCAHPQEAVVPLVREFFA----------------------------GLRE---------ESISMAVMKDALKLVANKGVQWKKSQ
        P F+TR I Q+ W++FC HP   +VPLVREF+A                            GL E           ++   ++  L  VA +G  W+ S 
Subjt:  PEFVTRFISQYKWQEFCAHPQEAVVPLVREFFA----------------------------GLRE---------ESISMAVMKDALKLVANKGVQWKKSQ

Query:  TKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIGSIIREEI
            T +  +LK  + +W HF+  R MP+TH  T++ +RV+LLY I+ G+ +NI  I  +EI
Subjt:  TKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIGSIIREEI

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]3.4e-1832.43Show/hide
Query:  MRKRDFLNEKGF----STRAGALPEFVTRFISQYKWQEFCAHPQEAVVPLVREFFAGLRE-------------------------------------ESI
        ++ R    EKGF    S   G LP F+ + I+Q+ W++FCAHP++ +VPLVREF+A L +                                     E+I
Subjt:  MRKRDFLNEKGF----STRAGALPEFVTRFISQYKWQEFCAHPQEAVVPLVREFFAGLRE-------------------------------------ESI

Query:  SMAVMKDALKLVANKGVQWKKSQTKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIGSIIREEI
        +   +   L+ VA  G +W  S     T +   L P + VW HF+K+ L+PTTH  T+S +R++LL+ ++ G  IN+G +I  EI
Subjt:  SMAVMKDALKLVANKGVQWKKSQTKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIGSIIREEI

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.8e-1926.21Show/hide
Query:  MRKRDFLNEKGF----STRAGALPEFVTRFISQYKWQEFCAHPQEAVVPLVREFFAGLRE-------------------------------------ESI
        ++ R    EKGF    S   G LP F+ + I+Q+ W++FCAHP++ +VPLVREF+A L +                                     ++I
Subjt:  MRKRDFLNEKGF----STRAGALPEFVTRFISQYKWQEFCAHPQEAVVPLVREFFAGLRE-------------------------------------ESI

Query:  SMAVMKDALKLVANKGVQWKKSQTKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIGSIIREEI-------LRVKIVPG
        +   +   L+ VA  G +W  S     T +   L P + VW HF+K+RL+PTTH  T+S +R++LL+ ++ G  IN+G +I  EI             P 
Subjt:  SMAVMKDALKLVANKGVQWKKSQTKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIGSIIREEI-------LRVKIVPG

Query:  ------KDEERHFFKPTSDLSLIGKLQQNSIQRKGKASTSEAT-PPSGMNLASPPQHTPFSGPWPSSEALAIAYQQ-----------LDQLRDNLRTYWA
              ++    F      L   G++   ++ R  +   +E+T  PS    A+   +          +AL     Q           L       + +WA
Subjt:  ------KDEERHFFKPTSDLSLIGKLQQNSIQRKGKASTSEAT-PPSGMNLASPPQHTPFSGPWPSSEALAIAYQQ-----------LDQLRDNLRTYWA

Query:  YAKERDEAIREFYLSIAPSIAPVFLDFPKSLLPQEDKDSDDEEDEDEDDES
        Y+KERD A+++   +      P F  FP+ +L   D + + E D+D  +E+
Subjt:  YAKERDEAIREFYLSIAPSIAPVFLDFPKSLLPQEDKDSDDEEDEDEDDES

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]8.3e-1733.33Show/hide
Query:  PEFVTRFISQYKWQEFCAHPQEAVVPLVREFFAGLRE-------------------------------------ESISMAVMKDALKLVANKGVQWKKSQ
        P F+   I Q+ WQ FCAHP++ +VPLVREF+  +                                       E I+   +   L+ VA  G +W  S 
Subjt:  PEFVTRFISQYKWQEFCAHPQEAVVPLVREFFAGLRE-------------------------------------ESISMAVMKDALKLVANKGVQWKKSQ

Query:  TKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIGSIIREEI
            T +   L P + VW HF+K+RL+PTTH  T+S E V LLY ++ G  IN+G +I  EI
Subjt:  TKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIGSIIREEI

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.6e-1832.43Show/hide
Query:  MRKRDFLNEKGF----STRAGALPEFVTRFISQYKWQEFCAHPQEAVVPLVREFFAGLRE-------------------------------------ESI
        ++ R    EKGF    S   G LP F+ + I+Q+ W++FCAHP++ +VPLVREF+A L +                                     E+I
Subjt:  MRKRDFLNEKGF----STRAGALPEFVTRFISQYKWQEFCAHPQEAVVPLVREFFAGLRE-------------------------------------ESI

Query:  SMAVMKDALKLVANKGVQWKKSQTKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIGSIIREEI
        +   +   L+ VA  G +W  S     T +   L P + VW HF+K+ L+PTTH  T+S +R++LL+ ++ G  IN+G +I  EI
Subjt:  SMAVMKDALKLVANKGVQWKKSQTKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIGSIIREEI

A0A2P5BCG4 Uncharacterized protein (Fragment)8.7e-2026.21Show/hide
Query:  MRKRDFLNEKGF----STRAGALPEFVTRFISQYKWQEFCAHPQEAVVPLVREFFAGLRE-------------------------------------ESI
        ++ R    EKGF    S   G LP F+ + I+Q+ W++FCAHP++ +VPLVREF+A L +                                     ++I
Subjt:  MRKRDFLNEKGF----STRAGALPEFVTRFISQYKWQEFCAHPQEAVVPLVREFFAGLRE-------------------------------------ESI

Query:  SMAVMKDALKLVANKGVQWKKSQTKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIGSIIREEI-------LRVKIVPG
        +   +   L+ VA  G +W  S     T +   L P + VW HF+K+RL+PTTH  T+S +R++LL+ ++ G  IN+G +I  EI             P 
Subjt:  SMAVMKDALKLVANKGVQWKKSQTKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIGSIIREEI-------LRVKIVPG

Query:  ------KDEERHFFKPTSDLSLIGKLQQNSIQRKGKASTSEAT-PPSGMNLASPPQHTPFSGPWPSSEALAIAYQQ-----------LDQLRDNLRTYWA
              ++    F      L   G++   ++ R  +   +E+T  PS    A+   +          +AL     Q           L       + +WA
Subjt:  ------KDEERHFFKPTSDLSLIGKLQQNSIQRKGKASTSEAT-PPSGMNLASPPQHTPFSGPWPSSEALAIAYQQ-----------LDQLRDNLRTYWA

Query:  YAKERDEAIREFYLSIAPSIAPVFLDFPKSLLPQEDKDSDDEEDEDEDDES
        Y+KERD A+++   +      P F  FP+ +L   D + + E D+D  +E+
Subjt:  YAKERDEAIREFYLSIAPSIAPVFLDFPKSLLPQEDKDSDDEEDEDEDDES

A0A2P5DAQ2 Uncharacterized protein4.0e-1733.33Show/hide
Query:  PEFVTRFISQYKWQEFCAHPQEAVVPLVREFFAGLRE-------------------------------------ESISMAVMKDALKLVANKGVQWKKSQ
        P F+   I Q+ WQ FCAHP++ +VPLVREF+  +                                       E I+   +   L+ VA  G +W  S 
Subjt:  PEFVTRFISQYKWQEFCAHPQEAVVPLVREFFAGLRE-------------------------------------ESISMAVMKDALKLVANKGVQWKKSQ

Query:  TKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIGSIIREEI
            T +   L P + VW HF+K+RL+PTTH  T+S E V LLY ++ G  IN+G +I  EI
Subjt:  TKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIGSIIREEI

W9QTD9 Uncharacterized protein4.9e-1532.1Show/hide
Query:  PEFVTRFISQYKWQEFCAHPQEAVVPLVREFFA----------------------------GLRE---------ESISMAVMKDALKLVANKGVQWKKSQ
        P F+TR I Q+ W++FC HP   +VPLVREF+A                            GL E           ++   ++  L  VA +G  W+ S 
Subjt:  PEFVTRFISQYKWQEFCAHPQEAVVPLVREFFA----------------------------GLRE---------ESISMAVMKDALKLVANKGVQWKKSQ

Query:  TKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIGSIIREEI
            T +  +LK  + +W HF+  R MP+TH  T++ +RV+LLY I+ G+ +NI  I  +EI
Subjt:  TKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIGSIIREEI

W9RBS1 Uncharacterized protein1.9e-1424.6Show/hide
Query:  RDFLNEKGF---STRAGALPEFVTRFISQYKWQEFCAHPQEAVVPLVREFFAGLRE----------------------------------ESISMAV---
        R+ + EKGF    +     P F++  I    WQ FC HP + +VPLV+EF+A L+                                   E I+ A+   
Subjt:  RDFLNEKGF---STRAGALPEFVTRFISQYKWQEFCAHPQEAVVPLVREFFAGLRE----------------------------------ESISMAV---

Query:  MKDALKLVANKGVQWKKSQTKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIG---------------------SIIRE
        +K+ LK +A  G QW  S     T    +L+P + VW HF+ +RL+ +TH  TIS  R +LLY ++ G  IN+G                     S+I E
Subjt:  MKDALKLVANKGVQWKKSQTKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIG---------------------SIIRE

Query:  EILRVKIVPGKDEERHFFKPTSDLSLIGKLQQNSIQR--KGKASTSEATPPSGMNLASPPQHTPFSGPWPSSEALAIAYQQLD------QLRDNLRTYWA
          ++  +     E R       DL  I ++     ++  KG+    +  P       +       S  W          QQ +      Q ++ L  +W 
Subjt:  EILRVKIVPGKDEERHFFKPTSDLSLIGKLQQNSIQR--KGKASTSEATPPSGMNLASPPQHTPFSGPWPSSEALAIAYQQLD------QLRDNLRTYWA

Query:  YAKERDEAIREFY
        Y+++RD A+++ +
Subjt:  YAKERDEAIREFY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCTCTCCTGCAGCTCCTCCAACCGTCTCACTCACCAAGCCAAAAGCCAAATCACCGAAGGCTCCTAAAAATCCATTCCCCGAAGTCTTTAGAGATGTCAATTT
TCAGGAACGGATGGAAATCATGAGAAAAAGAGATTTCCTCAACGAGAAAGGATTCTCTACCAGAGCGGGAGCGCTGCCAGAGTTCGTAACTAGATTTATCTCACAGTATA
AGTGGCAGGAGTTCTGCGCTCACCCGCAGGAGGCCGTGGTGCCTTTAGTGCGAGAATTTTTCGCCGGCCTGAGGGAGGAGAGCATAAGTATGGCAGTGATGAAAGATGCA
CTGAAATTAGTGGCCAATAAGGGAGTTCAGTGGAAAAAGTCTCAAACGAAGGTGAAGACACTAGTTTCAGGCGACCTAAAGCCTGAATCTGCAGTATGGCTTCACTTTAT
CAAGAACCGATTGATGCCAACCACCCATGACAGCACCATCTCAGTGGAGAGAGTTATGCTCCTCTACTGTATTATGAAGGGGTTGGAGATCAACATCGGGAGCATTATCA
GGGAGGAGATCCTTAGGGTGAAGATAGTCCCTGGTAAGGATGAGGAGCGTCACTTCTTCAAGCCTACTAGTGACCTATCCTTGATTGGGAAGCTCCAACAAAATAGCATC
CAAAGAAAAGGCAAAGCTTCCACATCTGAAGCTACTCCACCATCAGGGATGAATCTGGCTTCTCCACCTCAACACACTCCTTTTTCAGGGCCCTGGCCGTCATCTGAAGC
CCTAGCAATTGCCTACCAACAACTGGATCAACTCAGGGATAACCTGAGGACTTATTGGGCATATGCCAAGGAGAGAGATGAAGCCATTAGAGAGTTCTACCTCTCAATCG
CCCCGAGTATTGCTCCTGTCTTTCTCGATTTCCCTAAATCGCTGCTGCCCCAAGAAGACAAGGATTCTGATGATGAAGAAGATGAAGATGAAGATGATGAGAGCGAGAGT
TCCTCGGACGAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGCCTCTCCTGCAGCTCCTCCAACCGTCTCACTCACCAAGCCAAAAGCCAAATCACCGAAGGCTCCTAAAAATCCATTCCCCGAAGTCTTTAGAGATGTCAATTT
TCAGGAACGGATGGAAATCATGAGAAAAAGAGATTTCCTCAACGAGAAAGGATTCTCTACCAGAGCGGGAGCGCTGCCAGAGTTCGTAACTAGATTTATCTCACAGTATA
AGTGGCAGGAGTTCTGCGCTCACCCGCAGGAGGCCGTGGTGCCTTTAGTGCGAGAATTTTTCGCCGGCCTGAGGGAGGAGAGCATAAGTATGGCAGTGATGAAAGATGCA
CTGAAATTAGTGGCCAATAAGGGAGTTCAGTGGAAAAAGTCTCAAACGAAGGTGAAGACACTAGTTTCAGGCGACCTAAAGCCTGAATCTGCAGTATGGCTTCACTTTAT
CAAGAACCGATTGATGCCAACCACCCATGACAGCACCATCTCAGTGGAGAGAGTTATGCTCCTCTACTGTATTATGAAGGGGTTGGAGATCAACATCGGGAGCATTATCA
GGGAGGAGATCCTTAGGGTGAAGATAGTCCCTGGTAAGGATGAGGAGCGTCACTTCTTCAAGCCTACTAGTGACCTATCCTTGATTGGGAAGCTCCAACAAAATAGCATC
CAAAGAAAAGGCAAAGCTTCCACATCTGAAGCTACTCCACCATCAGGGATGAATCTGGCTTCTCCACCTCAACACACTCCTTTTTCAGGGCCCTGGCCGTCATCTGAAGC
CCTAGCAATTGCCTACCAACAACTGGATCAACTCAGGGATAACCTGAGGACTTATTGGGCATATGCCAAGGAGAGAGATGAAGCCATTAGAGAGTTCTACCTCTCAATCG
CCCCGAGTATTGCTCCTGTCTTTCTCGATTTCCCTAAATCGCTGCTGCCCCAAGAAGACAAGGATTCTGATGATGAAGAAGATGAAGATGAAGATGATGAGAGCGAGAGT
TCCTCGGACGAGGACTAG
Protein sequenceShow/hide protein sequence
MDASPAAPPTVSLTKPKAKSPKAPKNPFPEVFRDVNFQERMEIMRKRDFLNEKGFSTRAGALPEFVTRFISQYKWQEFCAHPQEAVVPLVREFFAGLREESISMAVMKDA
LKLVANKGVQWKKSQTKVKTLVSGDLKPESAVWLHFIKNRLMPTTHDSTISVERVMLLYCIMKGLEINIGSIIREEILRVKIVPGKDEERHFFKPTSDLSLIGKLQQNSI
QRKGKASTSEATPPSGMNLASPPQHTPFSGPWPSSEALAIAYQQLDQLRDNLRTYWAYAKERDEAIREFYLSIAPSIAPVFLDFPKSLLPQEDKDSDDEEDEDEDDESES
SSDED