; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg020818 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020818
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold10:26914621..26923298
RNA-Seq ExpressionSpg020818
SyntenySpg020818
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07150.1 TatD related DNase [Prunus dulcis]8.7e-3448Show/hide
Query:  GGKYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWVSGVYDPLRTKGRSAFWKELGDLFGLCGDCWCVAGDFNVIRAPAEKS
        G ++ +W    S+G  GGIA+LW+S+ V+ I+ + G +SVSI          W+SG+Y P R + R +FW+EL DL+G CGD WC+ GDFNV+R  AEKS
Subjt:  GGKYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWVSGVYDPLRTKGRSAFWKELGDLFGLCGDCWCVAGDFNVIRAPAEKS

Query:  SGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWAN---STTRSRIDRFLL
        + GR T+SM+ FN+FI+   LRDP L+N SFTW+N   +    R+DRFL+
Subjt:  SGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWAN---STTRSRIDRFLL

RVX06719.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]8.7e-3436.75Show/hide
Query:  GKYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWV-SGVYDPLRTKGRSAFWKELGDLFGLCGDCWCVAGDFNVIRAPAEKS
        G+++DW  + S GA GG+ + WD+RVV  +EV +G++SV   F+     +RWV +GVY P+  + R  FW+ELG + GL  D WCV GDFN+IR P E+S
Subjt:  GKYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWV-SGVYDPLRTKGRSAFWKELGDLFGLCGDCWCVAGDFNVIRAPAEKS

Query:  SGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTW---ANSTTRSRIDRFLL--------------------------------------------------
         GG  + SM++F E +E   LRD PL  G FTW    N+ ++SR+DRFL+                                                  
Subjt:  SGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTW---ANSTTRSRIDRFLL--------------------------------------------------

Query:  --LRALKRELKKWNQEVFGDFRLRKKEILGRIKF
          LRALK  LK WN+EVFG    +K+E L ++ +
Subjt:  --LRALKRELKKWNQEVFGDFRLRKKEILGRIKF

VVA41200.1 PREDICTED: RNA-directed DNA polymerase, partial [Prunus dulcis]3.9e-3437.61Show/hide
Query:  GGKYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWVSGVYDPLRTKGRSAFWKELGDLFGLCGDCWCVAGDFNVIRAPAEKS
        G ++ +W    S G  GGIA++W+S+  +  +   G +SVSI          W+SG+Y P   + R  FW+EL  LFGLCG+ WC+ GDFNV+R  +EKS
Subjt:  GGKYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWVSGVYDPLRTKGRSAFWKELGDLFGLCGDCWCVAGDFNVIRAPAEKS

Query:  SGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWAN---STTRSRIDRFLL----------------------------------------------LRAL
        +GGR T SMK FN+FI+   LRDP L+N SFTW+N   +    R+DRFL                                               LR +
Subjt:  SGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWAN---STTRSRIDRFLL----------------------------------------------LRAL

Query:  KRELKKWNQEVFGDFRLRKKEILGRI
        K+++K WN+EVFGD    KKE   RI
Subjt:  KRELKKWNQEVFGDFRLRKKEILGRI

XP_028075126.1 uncharacterized protein LOC114277426 [Camellia sinensis]1.2e-3537.36Show/hide
Query:  PPDVLFSGRECIEFG-LSIRV--GGKYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWVSGVYDPLRTKGRSAFWKELGDLF
        P  V+F   +C E   + IR   G ++  W ++ S G  GGI I+WD RVV+  EV+ G++S+SI FR +D +  W++GVY P R   R  +W ELG LF
Subjt:  PPDVLFSGRECIEFG-LSIRV--GGKYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWVSGVYDPLRTKGRSAFWKELGDLF

Query:  GLCGDCWCVAGDFNVIRAPAEKSSGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWAN---STTRSRIDRFLLLRALKRELKKWNQEVFGDFRLRKKEIL
        GLC   WCV  DFNV+R  +EK +G  + RSM+ F+ FI  C L DPPL N  FTW+N   +    R+DRFL           W +E+F + R   KE+ 
Subjt:  GLCGDCWCVAGDFNVIRAPAEKSSGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWAN---STTRSRIDRFLLLRALKRELKKWNQEVFGDFRLRKKEIL

Query:  GRI---KFPFLLAFAPF----SPKKAEEDLDHILW----SCAYARVVWGRFGQAFGMQGMTFVDHREMIKEFL
         R+    FP +L   PF    SP + E      +W    S       W   G+  G +G  F+     +K+ L
Subjt:  GRI---KFPFLLAFAPF----SPKKAEEDLDHILW----SCAYARVVWGRFGQAFGMQGMTFVDHREMIKEFL

XP_028093340.1 uncharacterized protein LOC114293463 [Camellia sinensis]2.3e-3442.02Show/hide
Query:  PPDVLFSGRECIEFG-LSIRV--GGKYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWVSGVYDPLRTKGRSAFWKELGDLF
        P  V+F   +C E   + IR   G ++  W ++ S G  GGI I+WD RVV+  EV+ G++S+SI+FR +D ++ W++GVY P++   R  +W EL  LF
Subjt:  PPDVLFSGRECIEFG-LSIRV--GGKYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWVSGVYDPLRTKGRSAFWKELGDLF

Query:  GLCGDCWCVAGDFNVIRAPAEKSSGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWAN---STTRSRIDRFLLLRALKRELKKWNQEV
        GLC   WCV GDFNV+R  +EK +G  ++RSM+ F+ FI  C L D PL N  FTW+N   +    ++DRFL     K       QEV
Subjt:  GLCGDCWCVAGDFNVIRAPAEKSSGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWAN---STTRSRIDRFLLLRALKRELKKWNQEV

TrEMBL top hitse value%identityAlignment
A0A2N9GTW6 Reverse transcriptase domain-containing protein2.2e-3846.11Show/hide
Query:  KYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWV-SGVYDPLRTKGRSAFWKELGDLFGLCGDCWCVAGDFNVIRAPAEKSS
        +YVDW  ++SVGA GGI ++WD R+V  IE   G YS+S  FR       W  SGVY P RT  RS  W+EL  +       WCV GDFNV R P E++ 
Subjt:  KYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWV-SGVYDPLRTKGRSAFWKELGDLFGLCGDCWCVAGDFNVIRAPAEKSS

Query:  GGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWANSTTRSRIDRFLL---LRALKRELKKWNQEVFGDFRLRKKEILGRIK
            + SM++F++FI   GL D P+  GSFTW+N+ +RSRID ++L   L++LK +L KWN+EVFGD  +RK +++ +I+
Subjt:  GGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWANSTTRSRIDRFLL---LRALKRELKKWNQEVFGDFRLRKKEILGRIK

A0A5E4GN72 PREDICTED: RNA-directed DNA polymerase (Fragment)1.9e-3437.61Show/hide
Query:  GGKYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWVSGVYDPLRTKGRSAFWKELGDLFGLCGDCWCVAGDFNVIRAPAEKS
        G ++ +W    S G  GGIA++W+S+  +  +   G +SVSI          W+SG+Y P   + R  FW+EL  LFGLCG+ WC+ GDFNV+R  +EKS
Subjt:  GGKYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWVSGVYDPLRTKGRSAFWKELGDLFGLCGDCWCVAGDFNVIRAPAEKS

Query:  SGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWAN---STTRSRIDRFLL----------------------------------------------LRAL
        +GGR T SMK FN+FI+   LRDP L+N SFTW+N   +    R+DRFL                                               LR +
Subjt:  SGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWAN---STTRSRIDRFLL----------------------------------------------LRAL

Query:  KRELKKWNQEVFGDFRLRKKEILGRI
        K+++K WN+EVFGD    KKE   RI
Subjt:  KRELKKWNQEVFGDFRLRKKEILGRI

M5VS59 Reverse transcriptase domain-containing protein (Fragment)1.4e-3448Show/hide
Query:  GGKYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWVSGVYDPLRTKGRSAFWKELGDLFGLCGDCWCVAGDFNVIRAPAEKS
        G ++ +W    S+G  GGIA+LW+S+ V+ I+ + G +SVSI          W+SG+Y P R + R++FW+EL DL+G CGD WC+ GDFNV+R  AEKS
Subjt:  GGKYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWVSGVYDPLRTKGRSAFWKELGDLFGLCGDCWCVAGDFNVIRAPAEKS

Query:  SGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWAN---STTRSRIDRFLL
        + GR T+SM+ FN+FI+   LRDP L+N SFTW+N   +    R+DRFL+
Subjt:  SGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWAN---STTRSRIDRFLL

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)6.5e-3548Show/hide
Query:  GGKYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWVSGVYDPLRTKGRSAFWKELGDLFGLCGDCWCVAGDFNVIRAPAEKS
        G ++ +W    S+G  GGIA+LW+S+ V+ I+ + G +SVSI          W+SG+Y P R + R++FW+EL DL+G CGD WC+ GDFNV+R  AEKS
Subjt:  GGKYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWVSGVYDPLRTKGRSAFWKELGDLFGLCGDCWCVAGDFNVIRAPAEKS

Query:  SGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWAN---STTRSRIDRFLL
        + GR T+SM+ FN+FI+   LRDP L+N SFTW+N   +    R+DRFL+
Subjt:  SGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWAN---STTRSRIDRFLL

M5XHS0 Reverse transcriptase domain-containing protein (Fragment)1.9e-3448Show/hide
Query:  GGKYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWVSGVYDPLRTKGRSAFWKELGDLFGLCGDCWCVAGDFNVIRAPAEKS
        G ++ +W    S+G  GGIA+LW+S+ V+ I+ + G +SVSI          W+SG+Y P R + R++FW+EL DL+G CGD WC+ GDFNV+R  AEKS
Subjt:  GGKYVDWEIMESVGALGGIAILWDSRVVAPIEVIKGLYSVSISFRLKDKEIRWVSGVYDPLRTKGRSAFWKELGDLFGLCGDCWCVAGDFNVIRAPAEKS

Query:  SGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWAN---STTRSRIDRFLL
        + GR T+SM+ FN+FI+   LRDP L+N SFTW+N   +    R+DRFL+
Subjt:  SGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWAN---STTRSRIDRFLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTGACACGACTTCCTTTGTCGGTAGCTGTAGCGGGTCAGAGGATGCAGAAAGGCAAAAATCCCGTGATCAGTACAAAGGAGGAGGCTCAATCAAATAGTCAAAG
AGATTTTGAGAGTGGGCCTAGGGTTGGGGAAGATGGGTATGCATCAGATCCATCAGTTATGAGCTACTTAGAGGACGACTCTTTCCTATCAACGTCGTTTGCAATTCAGG
GGCCAGTGGTCAATGTGCAGGAGTTGTTCGAGAATGATAAAACGCCAGAACAAAGCCAAGATGATCCGAAGAAGGATGGCCCGGAGTCTCGAGGATCTAAATTTGACCCT
AGTAATCAGATGAAGGTGATTGTTGAGCAAGATAATCAAGTAAGGATGATCAGTAACACCCAAGCGAGAGAAAATTCCGAAGAATTGAAGAAGGGCAGACCCATCATGGA
GACATCTTTGATTCAATCAATCCAGGTAAGCCTGCCACAGATAACTAGCCAGTGCCTTTTCCCACCCGACGTATTATTCAGTGGGAGAGAGTGTATCGAATTTGGCCTCA
GTATCCGTGTTGGCGGGAAGTATGTGGATTGGGAGATTATGGAGTCGGTGGGGGCCTTGGGAGGTATTGCAATTTTGTGGGATAGTAGGGTGGTTGCTCCAATTGAAGTC
ATTAAAGGTCTGTATTCAGTGTCTATCTCTTTTCGGTTGAAGGACAAGGAGATTAGATGGGTGTCAGGTGTTTACGACCCCCTAAGGACTAAAGGTAGATCGGCTTTTTG
GAAGGAGTTGGGAGATCTATTTGGCCTATGTGGCGATTGCTGGTGTGTGGCAGGGGATTTTAATGTGATTCGTGCGCCCGCAGAAAAATCCTCGGGGGGTAGATCTACTA
GATCCATGAAGAAGTTTAACGAGTTCATTGAAGGGTGTGGTCTTAGGGATCCTCCTTTGGTGAATGGTAGCTTTACTTGGGCCAATAGTACAACCAGAAGTAGGATTGAT
CGCTTTCTGCTGTTGAGGGCGCTTAAAAGGGAGCTGAAGAAGTGGAATCAGGAAGTGTTTGGGGACTTTAGGTTAAGGAAGAAGGAAATCTTGGGGAGGATTAAGTTCCC
TTTTCTGTTGGCTTTTGCACCCTTCTCCCCAAAGAAGGCGGAGGAAGACTTGGATCACATTCTTTGGAGTTGCGCCTATGCTCGTGTAGTGTGGGGTCGTTTTGGTCAGG
CTTTTGGGATGCAGGGTATGACTTTTGTTGATCACAGGGAGATGATTAAGGAGTTCCTCCTCCATTCGCCAGCAAACCCTAAAAATAAAACCCTAGCCGTCAGACACTAT
CTTCACCGGCGAACTCTCCTTCCGGCAACCCTCCGGCGAGCTCTCTTCTTCTCCACAACTCTCATCGGCGATCGTTCTCGGTTTGTCGTCGTTCTCGGTTTGTCGGTTTG
TCGTCGTTCTCGCTCGTTTGCCGCCGCCGCTCGCCGCTCGTCTGCCACCGCTTGCCGTTCGGCTGCCGACGCCACTCGCCGCTCGTCTGCTCATCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTGACACGACTTCCTTTGTCGGTAGCTGTAGCGGGTCAGAGGATGCAGAAAGGCAAAAATCCCGTGATCAGTACAAAGGAGGAGGCTCAATCAAATAGTCAAAG
AGATTTTGAGAGTGGGCCTAGGGTTGGGGAAGATGGGTATGCATCAGATCCATCAGTTATGAGCTACTTAGAGGACGACTCTTTCCTATCAACGTCGTTTGCAATTCAGG
GGCCAGTGGTCAATGTGCAGGAGTTGTTCGAGAATGATAAAACGCCAGAACAAAGCCAAGATGATCCGAAGAAGGATGGCCCGGAGTCTCGAGGATCTAAATTTGACCCT
AGTAATCAGATGAAGGTGATTGTTGAGCAAGATAATCAAGTAAGGATGATCAGTAACACCCAAGCGAGAGAAAATTCCGAAGAATTGAAGAAGGGCAGACCCATCATGGA
GACATCTTTGATTCAATCAATCCAGGTAAGCCTGCCACAGATAACTAGCCAGTGCCTTTTCCCACCCGACGTATTATTCAGTGGGAGAGAGTGTATCGAATTTGGCCTCA
GTATCCGTGTTGGCGGGAAGTATGTGGATTGGGAGATTATGGAGTCGGTGGGGGCCTTGGGAGGTATTGCAATTTTGTGGGATAGTAGGGTGGTTGCTCCAATTGAAGTC
ATTAAAGGTCTGTATTCAGTGTCTATCTCTTTTCGGTTGAAGGACAAGGAGATTAGATGGGTGTCAGGTGTTTACGACCCCCTAAGGACTAAAGGTAGATCGGCTTTTTG
GAAGGAGTTGGGAGATCTATTTGGCCTATGTGGCGATTGCTGGTGTGTGGCAGGGGATTTTAATGTGATTCGTGCGCCCGCAGAAAAATCCTCGGGGGGTAGATCTACTA
GATCCATGAAGAAGTTTAACGAGTTCATTGAAGGGTGTGGTCTTAGGGATCCTCCTTTGGTGAATGGTAGCTTTACTTGGGCCAATAGTACAACCAGAAGTAGGATTGAT
CGCTTTCTGCTGTTGAGGGCGCTTAAAAGGGAGCTGAAGAAGTGGAATCAGGAAGTGTTTGGGGACTTTAGGTTAAGGAAGAAGGAAATCTTGGGGAGGATTAAGTTCCC
TTTTCTGTTGGCTTTTGCACCCTTCTCCCCAAAGAAGGCGGAGGAAGACTTGGATCACATTCTTTGGAGTTGCGCCTATGCTCGTGTAGTGTGGGGTCGTTTTGGTCAGG
CTTTTGGGATGCAGGGTATGACTTTTGTTGATCACAGGGAGATGATTAAGGAGTTCCTCCTCCATTCGCCAGCAAACCCTAAAAATAAAACCCTAGCCGTCAGACACTAT
CTTCACCGGCGAACTCTCCTTCCGGCAACCCTCCGGCGAGCTCTCTTCTTCTCCACAACTCTCATCGGCGATCGTTCTCGGTTTGTCGTCGTTCTCGGTTTGTCGGTTTG
TCGTCGTTCTCGCTCGTTTGCCGCCGCCGCTCGCCGCTCGTCTGCCACCGCTTGCCGTTCGGCTGCCGACGCCACTCGCCGCTCGTCTGCTCATCAGTAG
Protein sequenceShow/hide protein sequence
MVLTRLPLSVAVAGQRMQKGKNPVISTKEEAQSNSQRDFESGPRVGEDGYASDPSVMSYLEDDSFLSTSFAIQGPVVNVQELFENDKTPEQSQDDPKKDGPESRGSKFDP
SNQMKVIVEQDNQVRMISNTQARENSEELKKGRPIMETSLIQSIQVSLPQITSQCLFPPDVLFSGRECIEFGLSIRVGGKYVDWEIMESVGALGGIAILWDSRVVAPIEV
IKGLYSVSISFRLKDKEIRWVSGVYDPLRTKGRSAFWKELGDLFGLCGDCWCVAGDFNVIRAPAEKSSGGRSTRSMKKFNEFIEGCGLRDPPLVNGSFTWANSTTRSRID
RFLLLRALKRELKKWNQEVFGDFRLRKKEILGRIKFPFLLAFAPFSPKKAEEDLDHILWSCAYARVVWGRFGQAFGMQGMTFVDHREMIKEFLLHSPANPKNKTLAVRHY
LHRRTLLPATLRRALFFSTTLIGDRSRFVVVLGLSVCRRSRSFAAAARRSSATACRSAADATRRSSAHQ