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Spg020829 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020829
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold10:29169507..29170751
RNA-Seq ExpressionSpg020829
SyntenySpg020829
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]7.5e-0536.15Show/hide
Query:  KAKASSSKGKSPASSS-SAPPPMSADQYAMDLGF------------------------------------------------------------SPAVTP
        +  ++SSKG  P+SSS S P PMSA QY MDLGF                                                            S AVT 
Subjt:  KAKASSSKGKSPASSS-SAPPPMSADQYAMDLGF------------------------------------------------------------SPAVTP

Query:  EKRFVPRSEIKTYFQKSLVITEPIIEPEFQ
        +KRFVPR EIK+YFQKS+V+ +PIIEPE+Q
Subjt:  EKRFVPRSEIKTYFQKSLVITEPIIEPEFQ

KAA0025901.1 hypothetical protein E6C27_scaffold34G001890 [Cucumis melo var. makuwa]7.2e-0847.5Show/hide
Query:  KAKASSSKGKSPASSS-SAPPPMSADQYAMDLGFSPAVTPEK---RFVPRSEIKTYFQKSLVITEPIIEPEFQEFLNDKSKLLAALAQTTSDADIQRIL-
        +  ++SSKG  P+SSS SAP PMSADQYAM+LGF    T EK   +      IK +F ++  + + I + +  +FLN+KSKLLA LAQ T+DAD QR+L 
Subjt:  KAKASSSKGKSPASSS-SAPPPMSADQYAMDLGFSPAVTPEK---RFVPRSEIKTYFQKSLVITEPIIEPEFQEFLNDKSKLLAALAQTTSDADIQRIL-

Query:  -QMAASSTSESPSSSAQGEE
          + AS++S+S SS  Q +E
Subjt:  -QMAASSTSESPSSSAQGEE

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]2.3e-0634.31Show/hide
Query:  KAKASSSKG-KSPASSSSAPPPMSADQYAMDLGF------------------------------------------------------------SPAVTP
        +  ++SSKG + P+SS+SAP P+SADQYAMDLGF                                                            S AVTP
Subjt:  KAKASSSKG-KSPASSSSAPPPMSADQYAMDLGF------------------------------------------------------------SPAVTP

Query:  EKRFVPRSEIKTYFQKSLVITEPIIEPEFQEFLNDKS
        +KRFVPR EIK+YFQK +V+ +PIIE E+Q   ++++
Subjt:  EKRFVPRSEIKTYFQKSLVITEPIIEPEFQEFLNDKS

KAE8646253.1 hypothetical protein Csa_023844, partial [Cucumis sativus]6.8e-0635.38Show/hide
Query:  KAKASSSKGKSPASSS-SAPPPMSADQYAMDLGF------------------------------------------------------------SPAVTP
        +A ++SS+G  P+SSS SAP PMSADQYAMDLGF                                                            S  +TP
Subjt:  KAKASSSKGKSPASSS-SAPPPMSADQYAMDLGF------------------------------------------------------------SPAVTP

Query:  EKRFVPRSEIKTYFQKSLVITEPIIEPEFQ
        +KRFVPR EIK+YFQK +++ + IIEPE+Q
Subjt:  EKRFVPRSEIKTYFQKSLVITEPIIEPEFQ

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]2.2e-1237.5Show/hide
Query:  KAKASSSKGKSPASSS-SAPPPMSADQYAMDLG------------------------------------------------------------FSPAVTP
        +  ++SSKG  P+SSS SAP PMS DQYAMDLG                                                            +S AVTP
Subjt:  KAKASSSKGKSPASSS-SAPPPMSADQYAMDLG------------------------------------------------------------FSPAVTP

Query:  EKRFVPRSEIKTYFQKSLVITEPIIEPEFQ--------------EFLNDKSKLLAALAQTTSDADIQRILQMAASSTSES---PSSSAQGEE
        +K+FVPR EIK+YFQK +VI +PIIE E+Q              +FLNDK K LAAL Q T DAD QR+L  A +++S S   PS   + EE
Subjt:  EKRFVPRSEIKTYFQKSLVITEPIIEPEFQ--------------EFLNDKSKLLAALAQTTSDADIQRILQMAASSTSES---PSSSAQGEE

TrEMBL top hitse value%identityAlignment
A0A5A7SNT5 Uncharacterized protein3.5e-0847.5Show/hide
Query:  KAKASSSKGKSPASSS-SAPPPMSADQYAMDLGFSPAVTPEK---RFVPRSEIKTYFQKSLVITEPIIEPEFQEFLNDKSKLLAALAQTTSDADIQRIL-
        +  ++SSKG  P+SSS SAP PMSADQYAM+LGF    T EK   +      IK +F ++  + + I + +  +FLN+KSKLLA LAQ T+DAD QR+L 
Subjt:  KAKASSSKGKSPASSS-SAPPPMSADQYAMDLGFSPAVTPEK---RFVPRSEIKTYFQKSLVITEPIIEPEFQEFLNDKSKLLAALAQTTSDADIQRIL-

Query:  -QMAASSTSESPSSSAQGEE
          + AS++S+S SS  Q +E
Subjt:  -QMAASSTSESPSSSAQGEE

A0A5A7TM80 Putative Retrotransposon protein1.1e-0634.31Show/hide
Query:  KAKASSSKG-KSPASSSSAPPPMSADQYAMDLGF------------------------------------------------------------SPAVTP
        +  ++SSKG + P+SS+SAP P+SADQYAMDLGF                                                            S AVTP
Subjt:  KAKASSSKG-KSPASSSSAPPPMSADQYAMDLGF------------------------------------------------------------SPAVTP

Query:  EKRFVPRSEIKTYFQKSLVITEPIIEPEFQEFLNDKS
        +KRFVPR EIK+YFQK +V+ +PIIE E+Q   ++++
Subjt:  EKRFVPRSEIKTYFQKSLVITEPIIEPEFQEFLNDKS

A0A5A7UFZ9 Uncharacterized protein4.7e-0535.38Show/hide
Query:  KAKASSSKGKSPASSSS-APPPMSADQYAMDLGF------------------------------------------------------------SPAVTP
        +  ++SSKG  P+SSS+ AP PMS DQYAM LGF                                                            S AVTP
Subjt:  KAKASSSKGKSPASSSS-APPPMSADQYAMDLGF------------------------------------------------------------SPAVTP

Query:  EKRFVPRSEIKTYFQKSLVITEPIIEPEFQ
        +KRFVPR EIK+YFQK  V+ +PIIEP +Q
Subjt:  EKRFVPRSEIKTYFQKSLVITEPIIEPEFQ

A0A5D3BI61 Uncharacterized protein1.1e-1237.5Show/hide
Query:  KAKASSSKGKSPASSS-SAPPPMSADQYAMDLG------------------------------------------------------------FSPAVTP
        +  ++SSKG  P+SSS SAP PMS DQYAMDLG                                                            +S AVTP
Subjt:  KAKASSSKGKSPASSS-SAPPPMSADQYAMDLG------------------------------------------------------------FSPAVTP

Query:  EKRFVPRSEIKTYFQKSLVITEPIIEPEFQ--------------EFLNDKSKLLAALAQTTSDADIQRILQMAASSTSES---PSSSAQGEE
        +K+FVPR EIK+YFQK +VI +PIIE E+Q              +FLNDK K LAAL Q T DAD QR+L  A +++S S   PS   + EE
Subjt:  EKRFVPRSEIKTYFQKSLVITEPIIEPEFQ--------------EFLNDKSKLLAALAQTTSDADIQRILQMAASSTSES---PSSSAQGEE

E5GCE6 Uncharacterized protein3.6e-0536.15Show/hide
Query:  KAKASSSKGKSPASSS-SAPPPMSADQYAMDLGF------------------------------------------------------------SPAVTP
        +  ++SSKG  P+SSS S P PMSA QY MDLGF                                                            S AVT 
Subjt:  KAKASSSKGKSPASSS-SAPPPMSADQYAMDLGF------------------------------------------------------------SPAVTP

Query:  EKRFVPRSEIKTYFQKSLVITEPIIEPEFQ
        +KRFVPR EIK+YFQKS+V+ +PIIEPE+Q
Subjt:  EKRFVPRSEIKTYFQKSLVITEPIIEPEFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGGAAATAAGGCAAAAGCCTCCTCTTCAAAGGGCAAAAGCCCAGCTTCCTCTTCTTCAGCACCTCCACCTATGAGTGCTGATCAATACGCTATGGATTTAGGGTT
TTCTCCGGCTGTTACACCAGAAAAGAGGTTTGTACCTCGCTCTGAGATCAAAACCTATTTTCAAAAATCTCTGGTTATCACTGAACCCATCATTGAACCAGAATTTCAAG
AATTCCTTAATGACAAGTCTAAACTTCTGGCGGCCCTAGCACAGACAACCTCTGATGCAGACATCCAGAGGATTCTACAAATGGCAGCCTCCAGCACAAGCGAGTCACCT
TCTTCTTCTGCACAAGGAGAAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGGAAATAAGGCAAAAGCCTCCTCTTCAAAGGGCAAAAGCCCAGCTTCCTCTTCTTCAGCACCTCCACCTATGAGTGCTGATCAATACGCTATGGATTTAGGGTT
TTCTCCGGCTGTTACACCAGAAAAGAGGTTTGTACCTCGCTCTGAGATCAAAACCTATTTTCAAAAATCTCTGGTTATCACTGAACCCATCATTGAACCAGAATTTCAAG
AATTCCTTAATGACAAGTCTAAACTTCTGGCGGCCCTAGCACAGACAACCTCTGATGCAGACATCCAGAGGATTCTACAAATGGCAGCCTCCAGCACAAGCGAGTCACCT
TCTTCTTCTGCACAAGGAGAAGAGTGA
Protein sequenceShow/hide protein sequence
MSGNKAKASSSKGKSPASSSSAPPPMSADQYAMDLGFSPAVTPEKRFVPRSEIKTYFQKSLVITEPIIEPEFQEFLNDKSKLLAALAQTTSDADIQRILQMAASSTSESP
SSSAQGEE