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Spg020851 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020851
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein CROWDED NUCLEI 1-like isoform X1
Genome locationscaffold10:26938079..26939494
RNA-Seq ExpressionSpg020851
SyntenySpg020851
Gene Ontology termsGO:0006997 - nucleus organization (biological process)
GO:0005652 - nuclear lamina (cellular component)
InterPro domainsIPR040418 - Protein crowded nuclei


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032453.1 Protein CROWDED NUCLEI 2 [Cucurbita argyrosperma subsp. argyrosperma]3.6e-2292.06Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV
        GL+L+E+K WASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSS+
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV

XP_004147138.1 protein CROWDED NUCLEI 3 [Cucumis sativus]2.8e-2292.06Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV
        GLLLIE+K+WASK+D+LGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSS+
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV

XP_022930031.1 protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita moschata]3.6e-2292.06Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV
        GL+L+E+K WASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSS+
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV

XP_038907101.1 protein CROWDED NUCLEI 1 isoform X1 [Benincasa hispida]1.6e-2293.65Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV
        GLLLIE+K+WASKY+QLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSS+
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV

XP_038907102.1 protein CROWDED NUCLEI 1 isoform X2 [Benincasa hispida]1.6e-2293.65Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV
        GLLLIE+K+WASKY+QLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSS+
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV

TrEMBL top hitse value%identityAlignment
A0A1S3CSZ3 protein CROWDED NUCLEI 32.5e-2190.48Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV
        GLLLIE+K+WA K+DQL QDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSS+
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV

A0A5D3BM77 Protein CROWDED NUCLEI 32.5e-2190.48Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV
        GLLLIE+K+WA K+DQL QDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSS+
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV

A0A6J1E0M3 protein CROWDED NUCLEI 1-like isoform X23.6e-2085.71Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV
        GLLL+E+KEWASKYD+LGQ+LAETEEI KREQSAH+IALSEVETR DNLKKALAAEKQ+VSS+
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV

A0A6J1EPS4 protein CROWDED NUCLEI 1-like isoform X11.8e-2292.06Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV
        GL+L+E+K WASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSS+
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV

A0A6J1K004 protein CROWDED NUCLEI 1-like isoform X11.8e-2292.06Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV
        GL+L+E+K WASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSS+
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV

SwissProt top hitse value%identityAlignment
A0A166B1A6 Nuclear matrix constituent protein 11.0e-1158.33Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHV
        GLLLIE+KEW SK+++L Q   ET++  K+EQ AHLIA+S+ E R +NL KAL  EKQ V
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHV

F4HRT5 Protein CROWDED NUCLEI 11.9e-1055.17Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQ
        GLLLIE+KEW+S+Y+ L Q   E  E  K+E++AHLIA+++VE R + L+KAL  EKQ
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQ

I0J0E7 Nuclear matrix constituent protein 18.4e-1460.32Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV
        GLLLIE+KEW+S ++++   LAE EEI KREQ+AH+IAL+E E R DNL+KAL  EKQ V+ +
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV

Q0DY81 Nuclear matrix constituent protein 1a2.7e-1255.56Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV
        GLLLIE+KEW +K D++ Q L + EEI KREQ+AHL A+SE E R ++++KAL  EKQ V+ +
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV

Q9SAF6 Protein CROWDED NUCLEI 23.9e-1157.14Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV
        GLLL+E KE  SK++QL Q   E +EI KREQS+HL AL+ VE R +NL+KAL  EKQ V  +
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV

Arabidopsis top hitse value%identityAlignment
AT1G13220.1 nuclear matrix constituent protein-related2.8e-1257.14Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV
        GLLL+E KE  SK++QL Q   E +EI KREQS+HL AL+ VE R +NL+KAL  EKQ V  +
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV

AT1G13220.2 nuclear matrix constituent protein-related2.8e-1257.14Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV
        GLLL+E KE  SK++QL Q   E +EI KREQS+HL AL+ VE R +NL+KAL  EKQ V  +
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV

AT1G67230.1 little nuclei11.4e-1155.17Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQ
        GLLLIE+KEW+S+Y+ L Q   E  E  K+E++AHLIA+++VE R + L+KAL  EKQ
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQ

AT1G68790.1 little nuclei34.9e-0946.03Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV
        GLLLIE+K+W S  ++L Q   E  E+ KRE++++ I L+E + R +NL+KAL  EKQ V+ +
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV

AT5G65770.1 little nuclei48.6e-0636.51Show/hide
Query:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV
        GLLL+E+ E +S+Y+++   + E++    RE+SA++ AL+E + R ++LKK +   K+ +SS+
Subjt:  GLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQHVSSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCGTTGGTGGGGCCGTTCTATTATATTCTGTGTCGGAGGGCGGATGAAGACCTGGACATATTTTGTGGAGTTGTACCTTTGCTCGCTCAGTTTGGAGTTTGTTT
TTTGAGGCTTTCGGGTTGCAAGGCAGGAGCTTCAGATGTCTCAGGACTTCTTTTGATAGAAAGGAAAGAGTGGGCTTCAAAGTACGACCAACTAGGGCAAGATTTAGCAG
AAACTGAGGAGATCTTCAAACGTGAACAATCAGCACATTTAATTGCATTATCAGAAGTTGAAACGAGGAGGGATAATTTGAAGAAAGCTCTAGCTGCTGAGAAGCAACAT
GTGTCTAGTGTATGCTACCCTTGGCACTTCCATTCCTCATTACCGTATTTGCTTATTTCTTTATGTTGTCATTTCCTCTTCTTTTTGCGTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCGTTGGTGGGGCCGTTCTATTATATTCTGTGTCGGAGGGCGGATGAAGACCTGGACATATTTTGTGGAGTTGTACCTTTGCTCGCTCAGTTTGGAGTTTGTTT
TTTGAGGCTTTCGGGTTGCAAGGCAGGAGCTTCAGATGTCTCAGGACTTCTTTTGATAGAAAGGAAAGAGTGGGCTTCAAAGTACGACCAACTAGGGCAAGATTTAGCAG
AAACTGAGGAGATCTTCAAACGTGAACAATCAGCACATTTAATTGCATTATCAGAAGTTGAAACGAGGAGGGATAATTTGAAGAAAGCTCTAGCTGCTGAGAAGCAACAT
GTGTCTAGTGTATGCTACCCTTGGCACTTCCATTCCTCATTACCGTATTTGCTTATTTCTTTATGTTGTCATTTCCTCTTCTTTTTGCGTTCTTAG
Protein sequenceShow/hide protein sequence
MPSLVGPFYYILCRRADEDLDIFCGVVPLLAQFGVCFLRLSGCKAGASDVSGLLLIERKEWASKYDQLGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKALAAEKQH
VSSVCYPWHFHSSLPYLLISLCCHFLFFLRS