; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg020872 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020872
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAP2/ERF domain-containing transcription factor
Genome locationscaffold9:3519242..3520710
RNA-Seq ExpressionSpg020872
SyntenySpg020872
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEU80303.1 ethylene-responsive transcription factor ERF021-like [Tanacetum cinerariifolium]2.3e-1144.76Show/hide
Query:  GSKKSQYRGVGRKTYGNWTAQIRHNGKN--IWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKNAANRLSPVTGR
        G   S YRGV ++ +G W ++IR  GKN  IWLGS++  E AA A+D AA+YLR     +KLNFP RV S P  P   N E I  A + AA +L P   +
Subjt:  GSKKSQYRGVGRKTYGNWTAQIRHNGKN--IWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKNAANRLSPVTGR

Query:  LHTDQ
           +Q
Subjt:  LHTDQ

KAD4384849.1 hypothetical protein E3N88_25017 [Mikania micrantha]4.3e-1041.82Show/hide
Query:  GSKKSQYRGVGRKTYGNWTAQIRHNGKN--IWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKNAANRLSPVTGR
        G   S YRGV ++ +G W ++IR  GKN  IWLGS++  E AA A+D AA+YLR     ++LNFP RV   P  P   + E I    + AA R +P    
Subjt:  GSKKSQYRGVGRKTYGNWTAQIRHNGKN--IWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKNAANRLSPVTGR

Query:  LHTDQEYWGS
           +QE+ GS
Subjt:  LHTDQEYWGS

KAD5317432.1 hypothetical protein E3N88_17378 [Mikania micrantha]2.5e-1034.64Show/hide
Query:  KTGIHGSK-KSQYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNF--EQIAAAMKNAAN
        +TG   S  + +YRGV ++ +G W ++IR  ++ + IWLGSYD  EKAA AFD AA+ LR   S++K NFP +    P  P G +    +I AA  + AN
Subjt:  KTGIHGSK-KSQYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNF--EQIAAAMKNAAN

Query:  RLSPVTGRLHTDQEYWGSVLLDTHNGNWMSSWSQLTLEF--ITSPPPFAVGPS
         +S  T  + TD     +  + +H+ N   +   +   F     PPP  + P+
Subjt:  RLSPVTGRLHTDQEYWGSVLLDTHNGNWMSSWSQLTLEF--ITSPPPFAVGPS

PWA72863.1 AP2/ERF domain-containing protein [Artemisia annua]2.3e-1144.76Show/hide
Query:  GSKKSQYRGVGRKTYGNWTAQIRHNGKN--IWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKNAANRLSPVTGR
        G   S YRGV ++ +G W ++IR  GKN  IWLGS++  E AA A+D AAYYLR     +KLNFP RV S P  P   + E I  A + AA +L P   +
Subjt:  GSKKSQYRGVGRKTYGNWTAQIRHNGKN--IWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKNAANRLSPVTGR

Query:  LHTDQ
           +Q
Subjt:  LHTDQ

XP_034709568.1 ethylene-responsive transcription factor ERF023 [Vitis riparia]1.9e-1035.57Show/hide
Query:  RRNMSIKTGIHGSKKSQYRGVGRKTYGNWTAQIRHNGK--NIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKN
        RRN   + G  G++   YRGV ++ +G W ++IR   K   IWLGS+   E AA A+DVAAYYL+     ++LNFP  V+  P  P+ C    I AA   
Subjt:  RRNMSIKTGIHGSKKSQYRGVGRKTYGNWTAQIRHNGK--NIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKN

Query:  AANRLSPV----TGRLHTD---QEYWGSVLLDTHNGNWMSSWSQLTLEF
        AAN +       TG    D    ++WG + L          W+    EF
Subjt:  AANRLSPV----TGRLHTD---QEYWGSVLLDTHNGNWMSSWSQLTLEF

TrEMBL top hitse value%identityAlignment
A0A251V388 Putative DNA-binding domain-containing protein1.0e-0939.66Show/hide
Query:  QYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNF--EQIAAAMKNAANRLSPVTGRLHT
        +Y+GV ++ +G W ++IR  H+ + IWLGSYD  EKAA AFD AA+ LR   S++K NFP +    P+ P G +    QI AA    AN + P       
Subjt:  QYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNF--EQIAAAMKNAANRLSPVTGRLHT

Query:  DQEYWGSVLLDTHNGN
        D      VL D+++ N
Subjt:  DQEYWGSVLLDTHNGN

A0A3Q7IWN0 AP2/ERF domain-containing protein7.8e-1042.22Show/hide
Query:  YRGVGRKTYGNWTAQIRHNGK--NIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKNAANRLSP
        YRGV ++ +G W ++IR  GK   IWLGSY + E AA A+DVAA++L+  + N +LNFP  + + P  P+    E +  A   AA R  P
Subjt:  YRGVGRKTYGNWTAQIRHNGK--NIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKNAANRLSP

A0A5N6NRP5 AP2/ERF domain-containing protein1.2e-1034.64Show/hide
Query:  KTGIHGSK-KSQYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNF--EQIAAAMKNAAN
        +TG   S  + +YRGV ++ +G W ++IR  ++ + IWLGSYD  EKAA AFD AA+ LR   S++K NFP +    P  P G +    +I AA  + AN
Subjt:  KTGIHGSK-KSQYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNF--EQIAAAMKNAAN

Query:  RLSPVTGRLHTDQEYWGSVLLDTHNGNWMSSWSQLTLEF--ITSPPPFAVGPS
         +S  T  + TD     +  + +H+ N   +   +   F     PPP  + P+
Subjt:  RLSPVTGRLHTDQEYWGSVLLDTHNGNWMSSWSQLTLEF--ITSPPPFAVGPS

A0A6N2BSY1 AP2/ERF domain-containing protein4.6e-1042.22Show/hide
Query:  YRGVGRKTYGNWTAQIRHNGK--NIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKNAANRLSP
        YRGV ++ +G W ++IR  GK   IWLGSY++ E AA A+DVAA++L+  + N +LNFP  + + P  P+    E +  A   AA R  P
Subjt:  YRGVGRKTYGNWTAQIRHNGK--NIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKNAANRLSP

V7BGE5 AP2/ERF domain-containing protein1.3e-0932.7Show/hide
Query:  GSKKSQYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKS-----HPSFP----AGCNFEQIAAAMKNAA
        G ++ +YRGV ++ +G W A+IR  H    +WLG++D  E AA A+D AA  LR   + +KLNFP  V +      P+FP    AG +          A 
Subjt:  GSKKSQYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKS-----HPSFP----AGCNFEQIAAAMKNAA

Query:  NRLSPVTGRLHTDQEYWGSVLLDTHNGN------WMSSWSQLTLEFITSPPPFAVGPSS
         + +P        ++YWG  LL    G+      W        L+  +SP P A  PSS
Subjt:  NRLSPVTGRLHTDQEYWGSVLLDTHNGN------WMSSWSQLTLEFITSPPPFAVGPSS

SwissProt top hitse value%identityAlignment
Q70II3 Ethylene-responsive transcription factor ERF1101.4e-0845.21Show/hide
Query:  KKSQYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFP
        KK +YRGV ++ +G W A+IR  H    +WLG++D  E AA A+D AA  LR   + +KLNFP  V+  P  P
Subjt:  KKSQYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFP

Q84QC2 Ethylene-responsive transcription factor ERF0171.7e-0948.53Show/hide
Query:  GIHGSKKSQYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFP
        G   S +S+Y+GV ++ +G W ++IR  ++ + IWLGSYD  EKAA AFD A Y LR   +N+K NFP
Subjt:  GIHGSKKSQYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFP

Q8L9K1 Ethylene-responsive transcription factor 131.9e-0842.68Show/hide
Query:  KKSQYRGVGRKTYGNWTAQIR---HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQI
        K  QYRGV R+ +G + A+IR    NG  +WLG+Y+  E AA+A+D AA+ LR   S +KLNFP  + S       C +E +
Subjt:  KKSQYRGVGRKTYGNWTAQIR---HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQI

Q9LQ28 Ethylene-responsive transcription factor ERF0223.1e-1146.32Show/hide
Query:  YRGVGRKTYGNWTAQIRHNGK--NIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKNAANRLSPVTGRL
        YRG+ R+ +G W ++IR  GK   IWLGSY+  E AA A+D AA +LR   +N  LNFP  V S P  P   + E I AA ++AA    P  GRL
Subjt:  YRGVGRKTYGNWTAQIRHNGK--NIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKNAANRLSPVTGRL

Q9S7L5 Ethylene-responsive transcription factor ERF0181.4e-0846.27Show/hide
Query:  KSQYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKS
        +S+Y+GV ++ +G W ++IR  H+ + IWLGSYD  EKAA AFD A + LR   +N   NFP    S
Subjt:  KSQYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKS

Arabidopsis top hitse value%identityAlignment
AT1G19210.1 Integrase-type DNA-binding superfamily protein1.2e-1048.53Show/hide
Query:  GIHGSKKSQYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFP
        G   S +S+Y+GV ++ +G W ++IR  ++ + IWLGSYD  EKAA AFD A Y LR   +N+K NFP
Subjt:  GIHGSKKSQYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFP

AT1G33760.1 Integrase-type DNA-binding superfamily protein2.2e-1246.32Show/hide
Query:  YRGVGRKTYGNWTAQIRHNGK--NIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKNAANRLSPVTGRL
        YRG+ R+ +G W ++IR  GK   IWLGSY+  E AA A+D AA +LR   +N  LNFP  V S P  P   + E I AA ++AA    P  GRL
Subjt:  YRGVGRKTYGNWTAQIRHNGK--NIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKNAANRLSPVTGRL

AT1G71450.1 Integrase-type DNA-binding superfamily protein1.3e-0940.7Show/hide
Query:  SQYRGVGRKTYGNWTAQIRHNG--KNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKNA
        S YRGV ++ +G W ++IR  G    IWLGS++  E AA A+DVAA++ R  +  ++LNFP    S P  PA  + + I  A+  A
Subjt:  SQYRGVGRKTYGNWTAQIRHNG--KNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKNA

AT1G74930.1 Integrase-type DNA-binding superfamily protein1.0e-0946.27Show/hide
Query:  KSQYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKS
        +S+Y+GV ++ +G W ++IR  H+ + IWLGSYD  EKAA AFD A + LR   +N   NFP    S
Subjt:  KSQYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKS

AT5G50080.1 ethylene response factor 1101.0e-0945.21Show/hide
Query:  KKSQYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFP
        KK +YRGV ++ +G W A+IR  H    +WLG++D  E AA A+D AA  LR   + +KLNFP  V+  P  P
Subjt:  KKSQYRGVGRKTYGNWTAQIR--HNGKNIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCGAAAGAAGAAAGCGTTGACGGTTGGAAGAAACGAACAAGGAGAAGGCGAAATAGGGGCGGCGACGGCTGTGGACGGAGGCAAAGTGGTGGTCGGTGGCGGCCG
GAGGCCAAAAGAGGAGCCAGCAACGGTGGAAGGAAGAGGGTTGAAGATGGTGGCGGCGAGAGAAGTTCAACTGGCAACTCGAGCTTGCACAGTTTTAATTCGAGGAAGAA
GGAATATGTCGATAAAAACCGGAATCCATGGTTCAAAGAAATCGCAGTACAGAGGCGTTGGTCGAAAGACGTACGGGAATTGGACGGCGCAGATTCGGCACAATGGCAAG
AATATATGGTTGGGAAGTTACGACGAGGAGGAAAAGGCGGCGATGGCCTTCGACGTGGCCGCCTATTACCTGAGATGCAGCCAGTCGAACTCGAAACTCAACTTTCCGGG
ACGTGTGAAGAGCCACCCCTCATTCCCAGCCGGCTGCAATTTCGAACAGATTGCGGCGGCCATGAAAAATGCGGCGAACAGGTTGTCACCGGTCACCGGCAGGCTTCATA
CTGATCAGGAGTACTGGGGTTCGGTTTTACTAGACACCCACAACGGCAATTGGATGTCTTCATGGTCGCAACTAACGTTAGAGTTCATCACATCCCCACCTCCTTTCGCC
GTCGGACCTTCAAGCCCCGCCCACAGCACTGACAGTGAGACTCTAACCACAATGGAGCAAGCTGTTGTGGAAAATCAATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCGAAAGAAGAAAGCGTTGACGGTTGGAAGAAACGAACAAGGAGAAGGCGAAATAGGGGCGGCGACGGCTGTGGACGGAGGCAAAGTGGTGGTCGGTGGCGGCCG
GAGGCCAAAAGAGGAGCCAGCAACGGTGGAAGGAAGAGGGTTGAAGATGGTGGCGGCGAGAGAAGTTCAACTGGCAACTCGAGCTTGCACAGTTTTAATTCGAGGAAGAA
GGAATATGTCGATAAAAACCGGAATCCATGGTTCAAAGAAATCGCAGTACAGAGGCGTTGGTCGAAAGACGTACGGGAATTGGACGGCGCAGATTCGGCACAATGGCAAG
AATATATGGTTGGGAAGTTACGACGAGGAGGAAAAGGCGGCGATGGCCTTCGACGTGGCCGCCTATTACCTGAGATGCAGCCAGTCGAACTCGAAACTCAACTTTCCGGG
ACGTGTGAAGAGCCACCCCTCATTCCCAGCCGGCTGCAATTTCGAACAGATTGCGGCGGCCATGAAAAATGCGGCGAACAGGTTGTCACCGGTCACCGGCAGGCTTCATA
CTGATCAGGAGTACTGGGGTTCGGTTTTACTAGACACCCACAACGGCAATTGGATGTCTTCATGGTCGCAACTAACGTTAGAGTTCATCACATCCCCACCTCCTTTCGCC
GTCGGACCTTCAAGCCCCGCCCACAGCACTGACAGTGAGACTCTAACCACAATGGAGCAAGCTGTTGTGGAAAATCAATTATGA
Protein sequenceShow/hide protein sequence
MGRKKKALTVGRNEQGEGEIGAATAVDGGKVVVGGGRRPKEEPATVEGRGLKMVAAREVQLATRACTVLIRGRRNMSIKTGIHGSKKSQYRGVGRKTYGNWTAQIRHNGK
NIWLGSYDEEEKAAMAFDVAAYYLRCSQSNSKLNFPGRVKSHPSFPAGCNFEQIAAAMKNAANRLSPVTGRLHTDQEYWGSVLLDTHNGNWMSSWSQLTLEFITSPPPFA
VGPSSPAHSTDSETLTTMEQAVVENQL