; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg020895 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020895
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold9:2538731..2540443
RNA-Seq ExpressionSpg020895
SyntenySpg020895
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]1.3e-1940.33Show/hide
Query:  DQDLEELIDQVDPPFTEEFVSRAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLL
        D+ L     +  P    E +SRAQ+YMSA E   SK+ E   KR +   R+   DK Q +    R R  Q D  +KFE+YT T++P EQ+LMEI+N  LL
Subjt:  DQDLEELIDQVDPPFTEEFVSRAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLL

Query:  NAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
          P ++ ++   R K +YCLFH DHGH+T++   LK+E+E LI  GYLKE+  + +A Q          G+    P  EIR
Subjt:  NAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.1e-2241.99Show/hide
Query:  DQDLEELIDQVDPPFTEEFVSRAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLL
        D+ L     +  P    E +SRAQ+YMSA E   SK+ E + KR +   R+   DK Q +    R R  Q D  +KFE+YTPT++P EQ+LMEI++  LL
Subjt:  DQDLEELIDQVDPPFTEEFVSRAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLL

Query:  NAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
          P ++K++   R K +YCLFHRDHGH+T++   LK+E+E LIR GYLKE+  + +A Q          G+    P  EIR
Subjt:  NAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]2.1e-2240.11Show/hide
Query:  DQDLEELIDQVDPPFTEEFVSRAQKYMSAEEL------LKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEI
        D+ L     +  P    E +SRAQKYMSAEE       L+ K+ +++ +R       S+ +K+ R          Q D  +KFE+YTPT++P EQ+LMEI
Subjt:  DQDLEELIDQVDPPFTEEFVSRAQKYMSAEEL------LKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEI

Query:  RNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
        ++  LL  P  +K+ P+ R K +YCLFHRDHGH+T +   LK+E+E LIR GYLKE+    +A      P R++   D   P  EIR
Subjt:  RNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]2.1e-2241.44Show/hide
Query:  DQDLEELIDQVDPPFTEEFVSRAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLL
        D+ L     +  P    E +SRAQ+YMSA E   SK+ E + KR +   R+   DK Q +    R R  Q D  +KFE+YTPT++P EQ+LMEI++  LL
Subjt:  DQDLEELIDQVDPPFTEEFVSRAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLL

Query:  NAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
          P ++K     R K +YCLFHRDH H+T++Y  LK+E+E LIR GYL+E+  + +A Q          G+ +  P  EIR
Subjt:  NAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

XP_023905316.1 uncharacterized protein LOC112017085 [Quercus suber]8.4e-1940.79Show/hide
Query:  DPPFTEEFVSRAQKYMSAEELL---KSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKS
        DP    E + RA KYM+AE+ L   + K  +RE ++ +  DRD + DK        R +P  G    KF  +TP + P +Q+LM+I++   L  P KLK 
Subjt:  DPPFTEEFVSRAQKYMSAEELL---KSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKS

Query:  NPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQR
        +P+ R + +YC FHRDH H T +Y  LK +IEALIR G L++F +K   DQ+
Subjt:  NPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQR

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128056.3e-2040.33Show/hide
Query:  DQDLEELIDQVDPPFTEEFVSRAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLL
        D+ L     +  P    E +SRAQ+YMSA E   SK+ E   KR +   R+   DK Q +    R R  Q D  +KFE+YT T++P EQ+LMEI+N  LL
Subjt:  DQDLEELIDQVDPPFTEEFVSRAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLL

Query:  NAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
          P ++ ++   R K +YCLFH DHGH+T++   LK+E+E LI  GYLKE+  + +A Q          G+    P  EIR
Subjt:  NAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

A0A6J1DWY0 uncharacterized protein LOC1110252931.0e-2241.99Show/hide
Query:  DQDLEELIDQVDPPFTEEFVSRAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLL
        D+ L     +  P    E +SRAQ+YMSA E   SK+ E + KR +   R+   DK Q +    R R  Q D  +KFE+YTPT++P EQ+LMEI++  LL
Subjt:  DQDLEELIDQVDPPFTEEFVSRAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLL

Query:  NAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
          P ++K++   R K +YCLFHRDHGH+T++   LK+E+E LIR GYLKE+  + +A Q          G+    P  EIR
Subjt:  NAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

A0A6J1DYL6 uncharacterized protein LOC1110257851.0e-2241.44Show/hide
Query:  DQDLEELIDQVDPPFTEEFVSRAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLL
        D+ L     +  P    E +SRAQ+YMSA E   SK+ E + KR +   R+   DK Q +    R R  Q D  +KFE+YTPT++P EQ+LMEI++  LL
Subjt:  DQDLEELIDQVDPPFTEEFVSRAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLL

Query:  NAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
          P ++K     R K +YCLFHRDH H+T++Y  LK+E+E LIR GYL+E+  + +A Q          G+ +  P  EIR
Subjt:  NAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

A0A6J1DZ52 uncharacterized protein LOC1110256121.0e-2240.11Show/hide
Query:  DQDLEELIDQVDPPFTEEFVSRAQKYMSAEEL------LKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEI
        D+ L     +  P    E +SRAQKYMSAEE       L+ K+ +++ +R       S+ +K+ R          Q D  +KFE+YTPT++P EQ+LMEI
Subjt:  DQDLEELIDQVDPPFTEEFVSRAQKYMSAEEL------LKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEI

Query:  RNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
        ++  LL  P  +K+ P+ R K +YCLFHRDHGH+T +   LK+E+E LIR GYLKE+    +A      P R++   D   P  EIR
Subjt:  RNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

A0A7N2N013 Ribonuclease H1.0e-1741.45Show/hide
Query:  DPPFTEEFVSRAQKYMSAEELLKSKKLEREHKRPSSSDR--DSRKDKKQRTDDHGRGRPDQ--GDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLK
        DP    E + RA KYM+AE+ L S++      RP   DR  DSR+D+ ++    G  R D+       +F  +TP + P +Q+LM+I++   L  P KLK
Subjt:  DPPFTEEFVSRAQKYMSAEELLKSKKLEREHKRPSSSDR--DSRKDKKQRTDDHGRGRPDQ--GDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLK

Query:  SNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQ
        S+P  R + +YC FHRDHGH T +   LK +IEALIR G L++F  K   DQ
Subjt:  SNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAAGAAGATGGAAAAGGGAAATCGAAATCTAAGCCCAGAAACTTCGAAAAATAACCGCCAGCCGCAGAGATCACGAGACGATGATAGCATCCAGGGGTCACCAAG
ACGAACAGGCCGAGGAGCCGAAGCCGAGGAGAATAGGCCGACGGGCCGAGGCCGAGGAGAGGATTCTGACGCCAAAATTGCCGCCCTTGAGGATAAGGTGAAAGGAATGA
ATCGGAGTTTGTCTCGAATACTCCAAATCCTGGATAAACCCGGCCCTAGCACCAAACTCCATGAGGGGGGCTTGATTAGAGACCCAAAGAAGGGGAAGGAGCCAGTCGAG
TACGTGGATGAATCAGAGACAAAATCCAAAGGAAAGAAGACCAACAGCGCAACGAGTAAGGTCAGGGGGCTGAAGCATGCAGAGCGCACAGTATTGAGGAGCCCAGAGCC
AAGTACCAGCCGTAGAACAGACTTGAGAAATCTGATCGAGGAAAAGCGCAAAATGGCCAAAACTGCTGAATCTGAGGCCAGAGCTACCGAAGCTGAAGCCAGGGCTGCCG
AGGCCGAGGCCAGGGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGAACAATCTCCCCTGGAAGACTGAGCTTCTGAACGCACTGAGGGAGCTCGAA
AATCCTCAGGGAGCCCTGCAGAAGTCAAGGGACCTTGGAGACCAAGATTTGGAAGAACTAATCGACCAAGTCGACCCGCCCTTCACAGAAGAATTCGTCTCCCGGGCACA
GAAGTATATGAGCGCAGAGGAGTTGCTCAAGTCAAAGAAGTTAGAACGTGAACACAAGAGGCCTTCTTCATCTGACCGCGACAGTAGGAAGGACAAAAAGCAGCGGACCG
ACGACCATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAGGTACACCCCTACTTCAATCCCACAGGAGCAGATCCTGATGGAGATAAGGAATACA
AATCTGCTCAACGCGCCCAGGAAACTGAAGTCCAATCCTGACAACAGAGACAAGAGTCAGTATTGTCTCTTTCATCGAGATCATGGACATTCAACCAGGAACTACATTCA
GCTAAAGGACGAGATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAGTTCACCACTAAGGCCGAGGCAGACCAGAGGTGGCCGAGGCCGACCAGAGACGACCCAGGCA
AAGACAAGGGTGGACCTCAACTGGAAATTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAAGAAGATGGAAAAGGGAAATCGAAATCTAAGCCCAGAAACTTCGAAAAATAACCGCCAGCCGCAGAGATCACGAGACGATGATAGCATCCAGGGGTCACCAAG
ACGAACAGGCCGAGGAGCCGAAGCCGAGGAGAATAGGCCGACGGGCCGAGGCCGAGGAGAGGATTCTGACGCCAAAATTGCCGCCCTTGAGGATAAGGTGAAAGGAATGA
ATCGGAGTTTGTCTCGAATACTCCAAATCCTGGATAAACCCGGCCCTAGCACCAAACTCCATGAGGGGGGCTTGATTAGAGACCCAAAGAAGGGGAAGGAGCCAGTCGAG
TACGTGGATGAATCAGAGACAAAATCCAAAGGAAAGAAGACCAACAGCGCAACGAGTAAGGTCAGGGGGCTGAAGCATGCAGAGCGCACAGTATTGAGGAGCCCAGAGCC
AAGTACCAGCCGTAGAACAGACTTGAGAAATCTGATCGAGGAAAAGCGCAAAATGGCCAAAACTGCTGAATCTGAGGCCAGAGCTACCGAAGCTGAAGCCAGGGCTGCCG
AGGCCGAGGCCAGGGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGAACAATCTCCCCTGGAAGACTGAGCTTCTGAACGCACTGAGGGAGCTCGAA
AATCCTCAGGGAGCCCTGCAGAAGTCAAGGGACCTTGGAGACCAAGATTTGGAAGAACTAATCGACCAAGTCGACCCGCCCTTCACAGAAGAATTCGTCTCCCGGGCACA
GAAGTATATGAGCGCAGAGGAGTTGCTCAAGTCAAAGAAGTTAGAACGTGAACACAAGAGGCCTTCTTCATCTGACCGCGACAGTAGGAAGGACAAAAAGCAGCGGACCG
ACGACCATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAGGTACACCCCTACTTCAATCCCACAGGAGCAGATCCTGATGGAGATAAGGAATACA
AATCTGCTCAACGCGCCCAGGAAACTGAAGTCCAATCCTGACAACAGAGACAAGAGTCAGTATTGTCTCTTTCATCGAGATCATGGACATTCAACCAGGAACTACATTCA
GCTAAAGGACGAGATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAGTTCACCACTAAGGCCGAGGCAGACCAGAGGTGGCCGAGGCCGACCAGAGACGACCCAGGCA
AAGACAAGGGTGGACCTCAACTGGAAATTCGTTGA
Protein sequenceShow/hide protein sequence
MSKKMEKGNRNLSPETSKNNRQPQRSRDDDSIQGSPRRTGRGAEAEENRPTGRGRGEDSDAKIAALEDKVKGMNRSLSRILQILDKPGPSTKLHEGGLIRDPKKGKEPVE
YVDESETKSKGKKTNSATSKVRGLKHAERTVLRSPEPSTSRRTDLRNLIEEKRKMAKTAESEARATEAEARAAEAEARAAEAEARLAEAEAKKNNLPWKTELLNALRELE
NPQGALQKSRDLGDQDLEELIDQVDPPFTEEFVSRAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNT
NLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR