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Spg020920 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020920
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box/LRR-repeat protein
Genome locationscaffold9:3143432..3148534
RNA-Seq ExpressionSpg020920
SyntenySpg020920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039267.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]2.3e-1256.34Show/hide
Query:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFFSI
        K  SF  FIFR LSKH   +I++L+Y+SS N DE ++VELLICYA  H VQQL I+TY++G+Y W   F I
Subjt:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFFSI

XP_008459617.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo]3.0e-1254.93Show/hide
Query:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFFSI
        K  SF  FIFR LSKH   +I++L+Y+SS N DE ++VELLICYA  H VQQL ++TY++G+Y W   F I
Subjt:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFFSI

XP_008459618.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X2 [Cucumis melo]3.0e-1254.93Show/hide
Query:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFFSI
        K  SF  FIFR LSKH   +I++L+Y+SS N DE ++VELLICYA  H VQQL ++TY++G+Y W   F I
Subjt:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFFSI

XP_022141791.1 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like [Momordica charantia]3.6e-1350.57Show/hide
Query:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFFSIFIAHCAKDTI--WVCG
        K++SF NFIFR LS+    +I++LSY+SS NEDE ++VELLIC+AR H V++LY+DTY + VY+W+   S     C+  T+   VCG
Subjt:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFFSIFIAHCAKDTI--WVCG

XP_038890214.1 F-box/LRR-repeat protein At3g26922-like [Benincasa hispida]7.5e-1154.17Show/hide
Query:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTY-SLGVYNWRLFFSI
        KE SF  FIFR LSKH    I +L+Y++S+NEDE ++VE LICYA    VQQL I+TY ++G+Y+W   FS+
Subjt:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTY-SLGVYNWRLFFSI

TrEMBL top hitse value%identityAlignment
A0A0A0KUU7 F-box domain-containing protein4.4e-0953.62Show/hide
Query:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFF
        K  SF  FIFR LS H    I +L+Y+SS N DE ++VELLICYA  H VQQL I+TY++ +Y W   F
Subjt:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFF

A0A1S3CB41 F-box/LRR-repeat protein At3g26922-like isoform X11.5e-1254.93Show/hide
Query:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFFSI
        K  SF  FIFR LSKH   +I++L+Y+SS N DE ++VELLICYA  H VQQL ++TY++G+Y W   F I
Subjt:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFFSI

A0A1S3CBU6 F-box/LRR-repeat protein At3g26922-like isoform X21.5e-1254.93Show/hide
Query:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFFSI
        K  SF  FIFR LSKH   +I++L+Y+SS N DE ++VELLICYA  H VQQL ++TY++G+Y W   F I
Subjt:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFFSI

A0A5A7TCF1 F-box/LRR-repeat protein1.1e-1256.34Show/hide
Query:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFFSI
        K  SF  FIFR LSKH   +I++L+Y+SS N DE ++VELLICYA  H VQQL I+TY++G+Y W   F I
Subjt:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFFSI

A0A6J1CKA9 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like1.7e-1350.57Show/hide
Query:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFFSIFIAHCAKDTI--WVCG
        K++SF NFIFR LS+    +I++LSY+SS NEDE ++VELLIC+AR H V++LY+DTY + VY+W+   S     C+  T+   VCG
Subjt:  KETSFNNFIFRTLSKHRGREIKRLSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFFSIFIAHCAKDTI--WVCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTCTTCTTCTGGTATTCTCCCTGGACTTACTCTTCTCACAATCGAATTGATTCGCCTTCTTCCCTCGTGTGGTTCATTTTCGGTTTCTAGATCGATGTTTTTCAT
CAGATCTGAAAACTTTTTCCTTTACTCTCCCTCGCCGCTTCGAATAGGCTCCCCTCTTGCCGCATGCTTCTCATTCCTTCGTGTCTTTGATGGTGCATATTCGTACCCAC
CCCATGCCGCTTCAACCATTTTGCCGCATCCAATGATGTTCCTTGATCGAGAGCACGCTGGATCGCTTGGTAGGCACGTTGGAGCTTGTGGCGTCTGGAATGAGTTTCTC
AGTTGTCCTTTCAACAATAATGTCGAACATGAAGAAGAAGAAGATGGAAGACAGAATCAGCCTTCTCCCAGCTTGTCTTCTTCATCACATTCTCTCCTCCTTAAACACCA
AACAGGTCGTGCAGACCTGTGTTCTATCAAGACGATGGAAAGCCCTTTGGACTCGCATCCCAATTCCCAACACTCAACTTTGATTTCGAGTCCTACCCATTTACAGAGAC
ATCAAGTGGAAAACCCTTGTGTCAGGAAAGAAACTTCATTGAAAGAAACTTCTTTTAATAATTTCATCTTCAGGACTTTATCTAAACACCGCGGCAGAGAAATTAAAAGA
CTGAGCTACTCTTCCTCCGAAAATGAAGACGAAGAGATTGTGGTAGAATTATTGATATGCTATGCACGATGTCACGGTGTTCAACAACTTTACATCGATACCTATTCTCT
CGGTGTTTATAACTGGAGACTGTTTTTCAGCATATTCATCGCTCACTGTGCTAAAGATACTATTTGGGTTTGTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTCTTCTTCTGGTATTCTCCCTGGACTTACTCTTCTCACAATCGAATTGATTCGCCTTCTTCCCTCGTGTGGTTCATTTTCGGTTTCTAGATCGATGTTTTTCAT
CAGATCTGAAAACTTTTTCCTTTACTCTCCCTCGCCGCTTCGAATAGGCTCCCCTCTTGCCGCATGCTTCTCATTCCTTCGTGTCTTTGATGGTGCATATTCGTACCCAC
CCCATGCCGCTTCAACCATTTTGCCGCATCCAATGATGTTCCTTGATCGAGAGCACGCTGGATCGCTTGGTAGGCACGTTGGAGCTTGTGGCGTCTGGAATGAGTTTCTC
AGTTGTCCTTTCAACAATAATGTCGAACATGAAGAAGAAGAAGATGGAAGACAGAATCAGCCTTCTCCCAGCTTGTCTTCTTCATCACATTCTCTCCTCCTTAAACACCA
AACAGGTCGTGCAGACCTGTGTTCTATCAAGACGATGGAAAGCCCTTTGGACTCGCATCCCAATTCCCAACACTCAACTTTGATTTCGAGTCCTACCCATTTACAGAGAC
ATCAAGTGGAAAACCCTTGTGTCAGGAAAGAAACTTCATTGAAAGAAACTTCTTTTAATAATTTCATCTTCAGGACTTTATCTAAACACCGCGGCAGAGAAATTAAAAGA
CTGAGCTACTCTTCCTCCGAAAATGAAGACGAAGAGATTGTGGTAGAATTATTGATATGCTATGCACGATGTCACGGTGTTCAACAACTTTACATCGATACCTATTCTCT
CGGTGTTTATAACTGGAGACTGTTTTTCAGCATATTCATCGCTCACTGTGCTAAAGATACTATTTGGGTTTGTGGATGA
Protein sequenceShow/hide protein sequence
MCSSSGILPGLTLLTIELIRLLPSCGSFSVSRSMFFIRSENFFLYSPSPLRIGSPLAACFSFLRVFDGAYSYPPHAASTILPHPMMFLDREHAGSLGRHVGACGVWNEFL
SCPFNNNVEHEEEEDGRQNQPSPSLSSSSHSLLLKHQTGRADLCSIKTMESPLDSHPNSQHSTLISSPTHLQRHQVENPCVRKETSLKETSFNNFIFRTLSKHRGREIKR
LSYSSSENEDEEIVVELLICYARCHGVQQLYIDTYSLGVYNWRLFFSIFIAHCAKDTIWVCG