; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg020924 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020924
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box/LRR-repeat protein
Genome locationscaffold9:3181076..3185684
RNA-Seq ExpressionSpg020924
SyntenySpg020924
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039267.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]4.9e-1650Show/hide
Query:  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIEVDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAI
        A I AP+LE  +  AS   ELT  +VEL TP+LK+V   N+LP ++SDSEFS IQ+V I++ D  F+  GS  Q+L++ F  LL + HNA SFTLP+KA 
Subjt:  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIEVDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAI

Query:  ETIL
        + +L
Subjt:  ETIL

KAE8649006.1 hypothetical protein Csa_008454 [Cucumis sativus]4.6e-1440.76Show/hide
Query:  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIE-VDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKA
        A I APKL+ L+  AS   + T  +V+L TP+L+++   N+LPTVKSD EFS I +V I+ V  F    + S     ++ F +LL +FH ARSFTLPLK 
Subjt:  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIE-VDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKA

Query:  IETILSVP-WRRLFLLNLTHLKLKTNGTNKLIDLPIGALANLLKCPNLETLAVLNEV
           ++S+  +  L   N+ HL+L+T  T  L++        LLK PNLE    + EV
Subjt:  IETILSVP-WRRLFLLNLTHLKLKTNGTNKLIDLPIGALANLLKCPNLETLAVLNEV

XP_008459617.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo]3.2e-2347.4Show/hide
Query:  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIEVDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAI
        A I AP+LE  +  AS   ELT  +VEL TP+LK+V   N+LP ++SDSEFS IQ+V I++ D  F+  GS  Q+L++ F  LL + HNA SFTLP+KA 
Subjt:  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIEVDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAI

Query:  ETILSVPWRRLFLLNLTHLKLKTNGTNKLIDLPIGALANLLKCPNLETLAVLNE
        + I S  ++ L   N+ HL+LKT  ++ L       L +LLK P LET+ VLNE
Subjt:  ETILSVPWRRLFLLNLTHLKLKTNGTNKLIDLPIGALANLLKCPNLETLAVLNE

XP_038890213.1 uncharacterized protein LOC120079853 [Benincasa hispida]2.3e-2651.28Show/hide
Query:  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIEVDDFAFSKK--GSAFQKLETNFFQLLKLFHNARSFTLPLK
        A I APKLE LE  + S + LT  +VEL+TP LKSV   N+LP +KSDSEF  I +V I+++D  F ++  G   QK  +NF +LL++FHNARSFTLPLK
Subjt:  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIEVDDFAFSKK--GSAFQKLETNFFQLLKLFHNARSFTLPLK

Query:  AIETILSVPWRRLFLLNLTHLKLKTNGTNKLIDLPIGALANLLKCPNLETLAVLNE
        A + +LS  +  L   N+ HL+LKTN T  L         +LLK PNLET AVLNE
Subjt:  AIETILSVPWRRLFLLNLTHLKLKTNGTNKLIDLPIGALANLLKCPNLETLAVLNE

XP_038890214.1 F-box/LRR-repeat protein At3g26922-like [Benincasa hispida]1.2e-2550Show/hide
Query:  ICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIEVDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAIET
        I APKL+ L+  AS   ELT  +VEL+TP+L++V   N+LP VKSDSEFS I +V I++ D  F + GS  QKL++NF +LL +FHNARSFTLPLKA  T
Subjt:  ICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIEVDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAIET

Query:  ILSVPWRRLFLLNLTHLKLKTNGTNKLIDLPIGALANLLKCPNLETLAVLNE
        ++   +  LF  N++HL+LKT  +  L++       +LLK P L+T  VLNE
Subjt:  ILSVPWRRLFLLNLTHLKLKTNGTNKLIDLPIGALANLLKCPNLETLAVLNE

TrEMBL top hitse value%identityAlignment
A0A0A0KSW6 F-box domain-containing protein6.4e-1439.62Show/hide
Query:  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIE-VDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKA
        A I APKL+ L+  AS   + T  +V+L TP+L+++   N+LPTVKSD EFS I +V I+ V  F    + S     ++ F +LL +FH ARSFTLPLK 
Subjt:  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIE-VDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKA

Query:  IETILSVP-WRRLFLLNLTHLKLKTNGTNKLIDLPIGALANLLKCPNLETLAVLNEVTM
           ++S+  +  L   N+ HL+L+T  T  L++        LLK PNLE    + E  +
Subjt:  IETILSVP-WRRLFLLNLTHLKLKTNGTNKLIDLPIGALANLLKCPNLETLAVLNEVTM

A0A1S3CB41 F-box/LRR-repeat protein At3g26922-like isoform X11.5e-2347.4Show/hide
Query:  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIEVDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAI
        A I AP+LE  +  AS   ELT  +VEL TP+LK+V   N+LP ++SDSEFS IQ+V I++ D  F+  GS  Q+L++ F  LL + HNA SFTLP+KA 
Subjt:  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIEVDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAI

Query:  ETILSVPWRRLFLLNLTHLKLKTNGTNKLIDLPIGALANLLKCPNLETLAVLNE
        + I S  ++ L   N+ HL+LKT  ++ L       L +LLK P LET+ VLNE
Subjt:  ETILSVPWRRLFLLNLTHLKLKTNGTNKLIDLPIGALANLLKCPNLETLAVLNE

A0A1S3CBU6 F-box/LRR-repeat protein At3g26922-like isoform X21.8e-1139.84Show/hide
Query:  SLKSVKLRNLLPTVKSDSEFSFIQEVYIEVDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAIETILSVPWRRLFLLNLTHLKLKTNGTNKLID
        ++ + +L N       D E +F Q+V I++ D  F+  GS  Q+L++ F  LL + HNA SFTLP+KA + I S  ++ L   N+ HL+LKT  ++ L  
Subjt:  SLKSVKLRNLLPTVKSDSEFSFIQEVYIEVDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAIETILSVPWRRLFLLNLTHLKLKTNGTNKLID

Query:  LPIGALANLLKCPNLETLAVLNE
             L +LLK P LET+ VLNE
Subjt:  LPIGALANLLKCPNLETLAVLNE

A0A5A7TCF1 F-box/LRR-repeat protein2.4e-1650Show/hide
Query:  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIEVDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAI
        A I AP+LE  +  AS   ELT  +VEL TP+LK+V   N+LP ++SDSEFS IQ+V I++ D  F+  GS  Q+L++ F  LL + HNA SFTLP+KA 
Subjt:  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIEVDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAI

Query:  ETIL
        + +L
Subjt:  ETIL

A0A6J1CKA9 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like1.6e-0949.49Show/hide
Query:  ACICAPKLEYLEFSASSLWELTSHKVEL-YTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIEVDDFAFSKKGSAF-QKLETNFFQLLKLFHNARSFTLPL
        A ICAPKLE L   + +  EL   +VEL  T SL++V   N+LPTV S  EFS IQ+V IEV ++ FS     F Q     F +L ++FHNARSF LPL
Subjt:  ACICAPKLEYLEFSASSLWELTSHKVEL-YTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIEVDDFAFSKKGSAF-QKLETNFFQLLKLFHNARSFTLPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGACGAGCTACAGTCGCATCCTAATCGCTCGCAGCCACCTCGAACCCACAGTCTCGCAACAAACCCACGCCTCGACGTTGAATGCAATGCTCTTGTGCTCGTCGAA
CTTCCCGTCGACAATGAAAACCTACCGCAGATTCCGACAATTCAAGGGTATTGCTTGTATTTGTGCTCCAAAACTTGAGTATTTGGAATTTTCTGCTTCTTCTCTCTGGG
AATTAACTTCACATAAAGTTGAGTTGTATACACCAAGTCTCAAAAGTGTCAAGCTTCGCAATCTTTTACCAACCGTGAAGTCTGATTCGGAATTTTCTTTCATACAAGAA
GTGTATATAGAAGTTGACGACTTTGCCTTCAGCAAAAAGGGTTCAGCCTTCCAAAAGTTGGAGACAAATTTTTTTCAGTTGCTTAAACTGTTTCATAATGCAAGGTCTTT
CACACTACCTTTGAAGGCAATAGAGACCATCTTGTCTGTTCCTTGGAGAAGGTTATTTTTACTGAACTTGACACATTTGAAGTTAAAAACAAATGGAACCAACAAGTTGA
TAGACTTGCCAATTGGTGCATTGGCGAATTTACTTAAATGCCCCAATTTAGAAACGTTGGCGGTTCTCAATGAGGTAACCATGCCAACAAGAACAGAACTTTATGGGGTT
TTGATTGTTGCTGATGTTGCTGAAATGGTTGTGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGACGAGCTACAGTCGCATCCTAATCGCTCGCAGCCACCTCGAACCCACAGTCTCGCAACAAACCCACGCCTCGACGTTGAATGCAATGCTCTTGTGCTCGTCGAA
CTTCCCGTCGACAATGAAAACCTACCGCAGATTCCGACAATTCAAGGGTATTGCTTGTATTTGTGCTCCAAAACTTGAGTATTTGGAATTTTCTGCTTCTTCTCTCTGGG
AATTAACTTCACATAAAGTTGAGTTGTATACACCAAGTCTCAAAAGTGTCAAGCTTCGCAATCTTTTACCAACCGTGAAGTCTGATTCGGAATTTTCTTTCATACAAGAA
GTGTATATAGAAGTTGACGACTTTGCCTTCAGCAAAAAGGGTTCAGCCTTCCAAAAGTTGGAGACAAATTTTTTTCAGTTGCTTAAACTGTTTCATAATGCAAGGTCTTT
CACACTACCTTTGAAGGCAATAGAGACCATCTTGTCTGTTCCTTGGAGAAGGTTATTTTTACTGAACTTGACACATTTGAAGTTAAAAACAAATGGAACCAACAAGTTGA
TAGACTTGCCAATTGGTGCATTGGCGAATTTACTTAAATGCCCCAATTTAGAAACGTTGGCGGTTCTCAATGAGGTAACCATGCCAACAAGAACAGAACTTTATGGGGTT
TTGATTGTTGCTGATGTTGCTGAAATGGTTGTGATCTGA
Protein sequenceShow/hide protein sequence
MPTSYSRILIARSHLEPTVSQQTHASTLNAMLLCSSNFPSTMKTYRRFRQFKGIACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQE
VYIEVDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAIETILSVPWRRLFLLNLTHLKLKTNGTNKLIDLPIGALANLLKCPNLETLAVLNEVTMPTRTELYGV
LIVADVAEMVVI