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Spg020936 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020936
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box/RNI-like superfamily protein
Genome locationscaffold9:2864703..2867230
RNA-Seq ExpressionSpg020936
SyntenySpg020936
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY20083.1 F-box/RNI-like superfamily protein [Theobroma cacao]9.8e-0733.08Show/hide
Query:  KVEICTPRLGFVKFEGSLPVVCSLEKLAYLQKVEIVLLDPIFHGHGPVEQRKLAQNLARTLSVLPNAMAIRMSLMAFRLLSNFPSVLEDKSNLFSKLGHL
        KVEIC PRL   K+ G  P+VC  E LA+L   + V  D   +     E+  + + L  T      A ++ +S    ++L+ FPS+L+     F+ L HL
Subjt:  KVEICTPRLGFVKFEGSLPVVCSLEKLAYLQKVEIVLLDPIFHGHGPVEQRKLAQNLARTLSVLPNAMAIRMSLMAFRLLSNFPSVLEDKSNLFSKLGHL

Query:  KLK-KDAKSTTMEIPVNVMACLLGRAPFLK
        K+K K  +S   E+P  ++ C L  +  LK
Subjt:  KLK-KDAKSTTMEIPVNVMACLLGRAPFLK

XP_011040385.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like [Populus euphratica]6.0e-0430.26Show/hide
Query:  NGRCSLC---AKVEICTPRLGFVKFEGSLPVVCSLEKLAYLQKVEIVLLDPIFHGH------------GPVEQRKLAQNLARTLSVLPNAMAIRMSLMAF
        N RCS      KV +  P+L   KF+G+ P+  S   L  L  V +V L    H H               ++  L  NL + L     A ++ +S+   
Subjt:  NGRCSLC---AKVEICTPRLGFVKFEGSLPVVCSLEKLAYLQKVEIVLLDPIFHGH------------GPVEQRKLAQNLARTLSVLPNAMAIRMSLMAF

Query:  RLLSNFPSVLEDKSNLFSKLGHLKLKKDAKSTTMEIPVNVMACLLGRAPFLK
         +LS  P+ L+   + FS L +LKLK D K  T  +P +V+   L  + FLK
Subjt:  RLLSNFPSVLEDKSNLFSKLGHLKLKKDAKSTTMEIPVNVMACLLGRAPFLK

XP_017984420.1 PREDICTED: F-box/LRR-repeat protein At3g26922 [Theobroma cacao]4.4e-0733.08Show/hide
Query:  KVEICTPRLGFVKFEGSLPVVCSLEKLAYLQKVEIVLLDPIFHGHGPVEQRKLAQNLARTLSVLPNAMAIRMSLMAFRLLSNFPSVLEDKSNLFSKLGHL
        KVEIC PRL   K+ G  P+VC  E LA+L  V     D   +     E+  + + L  T +    A ++ +S    ++L+ FPS+L+     F+ L HL
Subjt:  KVEICTPRLGFVKFEGSLPVVCSLEKLAYLQKVEIVLLDPIFHGHGPVEQRKLAQNLARTLSVLPNAMAIRMSLMAFRLLSNFPSVLEDKSNLFSKLGHL

Query:  KLK-KDAKSTTMEIPVNVMACLLGRAPFLK
        K+K K  +S   E+P  ++ C L  +  LK
Subjt:  KLK-KDAKSTTMEIPVNVMACLLGRAPFLK

XP_017984699.1 PREDICTED: putative F-box/FBD/LRR-repeat protein At5g22670 [Theobroma cacao]7.8e-0430.77Show/hide
Query:  KVEICTPRLGFVKFEGSLPVVCSLEKLAYLQKVEIVLLDPIFHGHGPVEQRKLAQNLARTLSVLPNAMAIRMSLMAFRLLSNFPSVLEDKSNLFSKLGHL
        KVEI  PRL   K  G +P+VC  E LA+L  V   +   IF     + + +    L    +   +A ++ +S    ++L+ FPS+++     F+ L HL
Subjt:  KVEICTPRLGFVKFEGSLPVVCSLEKLAYLQKVEIVLLDPIFHGHGPVEQRKLAQNLARTLSVLPNAMAIRMSLMAFRLLSNFPSVLEDKSNLFSKLGHL

Query:  KLK-KDAKSTTMEIPVNVMACLLGRAPFLK
         +K K  +S   EIP  ++   L R+  LK
Subjt:  KLK-KDAKSTTMEIPVNVMACLLGRAPFLK

TrEMBL top hitse value%identityAlignment
A0A061FSK8 F-box/RNI-like superfamily protein8.4e-0430Show/hide
Query:  KVEICTPRLGFVKFEGSLPVVCSLEKLAYLQKVEIVLLDPIFHGHGPVEQRKLAQNLARTLSVLPNAMAIRMSLMAFRLLSNFPSVLEDKSNLFSKLGHL
        KVEI  PRL   K  G +P++C  E LA+L  V   +   IF     + + +    L    +   +A ++ +S    ++L+ FPS+++     F+ L HL
Subjt:  KVEICTPRLGFVKFEGSLPVVCSLEKLAYLQKVEIVLLDPIFHGHGPVEQRKLAQNLARTLSVLPNAMAIRMSLMAFRLLSNFPSVLEDKSNLFSKLGHL

Query:  KLK-KDAKSTTMEIPVNVMACLLGRAPFLK
         +K K  +S   EIP  ++   L R+  LK
Subjt:  KLK-KDAKSTTMEIPVNVMACLLGRAPFLK

A0A061FSZ8 F-box/RNI-like superfamily protein4.8e-0733.08Show/hide
Query:  KVEICTPRLGFVKFEGSLPVVCSLEKLAYLQKVEIVLLDPIFHGHGPVEQRKLAQNLARTLSVLPNAMAIRMSLMAFRLLSNFPSVLEDKSNLFSKLGHL
        KVEIC PRL   K+ G  P+VC  E LA+L   + V  D   +     E+  + + L  T      A ++ +S    ++L+ FPS+L+     F+ L HL
Subjt:  KVEICTPRLGFVKFEGSLPVVCSLEKLAYLQKVEIVLLDPIFHGHGPVEQRKLAQNLARTLSVLPNAMAIRMSLMAFRLLSNFPSVLEDKSNLFSKLGHL

Query:  KLK-KDAKSTTMEIPVNVMACLLGRAPFLK
        K+K K  +S   E+P  ++ C L  +  LK
Subjt:  KLK-KDAKSTTMEIPVNVMACLLGRAPFLK

A0A061FZ54 F-box/RNI-like superfamily protein4.9e-0432Show/hide
Query:  KVEICTPRLGFVKFEGSLPVVCSLEKLAYLQKVEIVLLDP--IFHGHGPVEQRKLAQNLARTLSVLPNAMAIRMSLMAFRLLSNFPSVLEDKSNLFSKLG
        KVEI  PRL   K+ G+ P+VC  + LA +  V   +  P    H  G    R +      TLS   +A ++ +S    ++L+ FPS+L+     F+ L 
Subjt:  KVEICTPRLGFVKFEGSLPVVCSLEKLAYLQKVEIVLLDP--IFHGHGPVEQRKLAQNLARTLSVLPNAMAIRMSLMAFRLLSNFPSVLEDKSNLFSKLG

Query:  HLKLK-KDAKSTTMEIPVNVMACLL
        H+K+K K  +    E+P    AC+L
Subjt:  HLKLK-KDAKSTTMEIPVNVMACLL

A0A2K1YI97 F-box domain-containing protein4.9e-0430Show/hide
Query:  GRCSLCAKVEICTPRLGFVKFEGSLPVVCSLEKLAYLQKVEIVLLDPIFHGHG--------------PVEQRKLAQNLARTLSVLPNAMAIRMSLMAFRL
        GR     KV +  P+L   KF G+ P+  S   L  L  V +V L    H H                  ++ L  NL + L    +A ++ +S+    +
Subjt:  GRCSLCAKVEICTPRLGFVKFEGSLPVVCSLEKLAYLQKVEIVLLDPIFHGHG--------------PVEQRKLAQNLARTLSVLPNAMAIRMSLMAFRL

Query:  LSNFPSVLEDKSNLFSKLGHLKLKKDAKSTTMEIPVNVMACLLGRAPFLK
        LS  P+ L+   + FS L +LKLK D K  T  +P +V+   L  A FLK
Subjt:  LSNFPSVLEDKSNLFSKLGHLKLKKDAKSTTMEIPVNVMACLLGRAPFLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAATGGGCGATGTTCTTTGTGTGCAAAGGTTGAGATCTGCACACCAAGGCTTGGTTTTGTAAAGTTTGAAGGGAGTTTGCCTGTGGTGTGTTCTTTGGAGAAGCT
GGCTTATTTACAGAAAGTGGAAATAGTACTACTTGATCCAATCTTCCATGGCCATGGTCCTGTTGAGCAGAGAAAGTTGGCTCAAAATCTTGCTAGAACTCTTAGTGTTC
TTCCCAATGCCATGGCAATTAGAATGTCTTTAATGGCCTTTCGGCTTCTCTCCAACTTTCCATCAGTTTTAGAGGATAAGTCAAATCTGTTCTCTAAGTTGGGGCATTTA
AAGTTGAAGAAAGATGCTAAATCCACAACCATGGAAATTCCAGTGAATGTGATGGCCTGCTTGCTTGGGAGGGCTCCTTTTCTAAAAACCATATTGGTTGAACTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATAATGGGCGATGTTCTTTGTGTGCAAAGGTTGAGATCTGCACACCAAGGCTTGGTTTTGTAAAGTTTGAAGGGAGTTTGCCTGTGGTGTGTTCTTTGGAGAAGCT
GGCTTATTTACAGAAAGTGGAAATAGTACTACTTGATCCAATCTTCCATGGCCATGGTCCTGTTGAGCAGAGAAAGTTGGCTCAAAATCTTGCTAGAACTCTTAGTGTTC
TTCCCAATGCCATGGCAATTAGAATGTCTTTAATGGCCTTTCGGCTTCTCTCCAACTTTCCATCAGTTTTAGAGGATAAGTCAAATCTGTTCTCTAAGTTGGGGCATTTA
AAGTTGAAGAAAGATGCTAAATCCACAACCATGGAAATTCCAGTGAATGTGATGGCCTGCTTGCTTGGGAGGGCTCCTTTTCTAAAAACCATATTGGTTGAACTCTAG
Protein sequenceShow/hide protein sequence
MHNGRCSLCAKVEICTPRLGFVKFEGSLPVVCSLEKLAYLQKVEIVLLDPIFHGHGPVEQRKLAQNLARTLSVLPNAMAIRMSLMAFRLLSNFPSVLEDKSNLFSKLGHL
KLKKDAKSTTMEIPVNVMACLLGRAPFLKTILVEL