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Spg020955 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020955
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold9:2472429..2478842
RNA-Seq ExpressionSpg020955
SyntenySpg020955
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019178790.1 PREDICTED: uncharacterized protein LOC109173896 [Ipomoea nil]1.2e-0647.69Show/hide
Query:  ILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDVPAES
        ILLG PF+K+AKT +++ + +LS+E+  EI K +I   +KYPD   SLY ++V+D +VQDV  +S
Subjt:  ILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDVPAES

XP_019198426.1 PREDICTED: uncharacterized protein LOC109192308 [Ipomoea nil]1.2e-0647.69Show/hide
Query:  ILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDVPAES
        ILLG PF+K+AKT +++ + +LS+E+  EI K +I   +KYPD   SLY ++V+D +VQDV  +S
Subjt:  ILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDVPAES

XP_030924665.1 uncharacterized protein LOC115951640 [Quercus lobata]3.8e-0545.9Show/hide
Query:  ILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDV
        ILLG PF+K++KT ++LH  +L++E+  EIVK +I   +KYPD    +Y I+V+D + Q+V
Subjt:  ILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDV

XP_031108596.1 uncharacterized protein LOC116013076 [Ipomoea triloba]2.2e-0545.9Show/hide
Query:  ILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDV
        ILLG  F+K+AKT +++ + +LS+E+  EI K +I   +KYPD   SLY ++++D +VQDV
Subjt:  ILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDV

XP_038986582.1 uncharacterized protein LOC120112088 [Phoenix dactylifera]1.1e-0444.44Show/hide
Query:  ASILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDV
        A ILLG PF+K++KT +++H   L++E+  EI+K +I   +KYPD    +Y I+V+D +VQ V
Subjt:  ASILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDV

TrEMBL top hitse value%identityAlignment
A0A1U7Z4C5 uncharacterized protein LOC1045910071.6e-0434.67Show/hide
Query:  EASLRFAASILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDVPAESE
        E ++  + S+LLG PF+K+ KT +++  D  S+E+  EIVK +I + +KYP+   S+  +++VD ++Q++  E +
Subjt:  EASLRFAASILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDVPAESE

A0A1U7ZF93 uncharacterized protein LOC1045899241.2e-0430.1Show/hide
Query:  TPCPRGI-DTLGILLRFLLLRVILYTCTKVGDAEASLRFAASILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVV
        T  P+G+ + + + +  L+  V  Y      D  ++   +  ILLG PF+K++KT +++H+  L++E+ +EI+  +I   +KYP     +Y I+V+D + 
Subjt:  TPCPRGI-DTLGILLRFLLLRVILYTCTKVGDAEASLRFAASILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVV

Query:  QDV
        Q+V
Subjt:  QDV

A0A2I4DT12 uncharacterized protein LOC1089831837.0e-0542.86Show/hide
Query:  ASILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDV
        A ILLGIPF+K++KT +N+H   L++++  EI+K +I   +KYP    S+Y I+V+D +  +V
Subjt:  ASILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDV

A0A6P8E7Z7 uncharacterized protein LOC1162122164.6e-0436.59Show/hide
Query:  AASILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDVPAESEWVSFQI-WAFSGV
        ++ ILLG PF+K+A+T +++H   LSLE+ +E +  +I   +++PDT  S+  ++V+D  V+DV AE  +V  ++ WA   +
Subjt:  AASILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDVPAESEWVSFQI-WAFSGV

A0A6P9EU17 uncharacterized protein LOC1183488937.0e-0542.86Show/hide
Query:  ASILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDV
        A ILLGIPF+K++KT +N+H   L++++  EI+K +I   +KYP    S+Y I+V+D +  +V
Subjt:  ASILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAATTTACCCAGAAATGCGACCGCATTTCTGGAAAAACAGAGGCAGTTCCGAGTCTTCCGCGGGTCGTTTTGAACGAGACTTATTCGCACCTAACTGGCTACTT
TGCATGCTATGTGAGTTTGATCTCGAAAGGGACAGACGATATCGGTTCTCATAAAGGTGAAATTAACCGAGAGTGTCTCGACGCTGTGGTCATAGCGTCTCGACGCTATG
ACCTTTTGCCACCTGATCAGAGAAAGAAAAATATGAGCGTCGAGACGCCCTGTCCTCGTGGGATCGATACCCTTGGAATACTTCTAAGGTTTTTATTGCTACGTGTGATA
CTGTATACTTGCACTAAGGTTGGCGACGCTGAAGCAAGCTTACGTTTTGCTGCATCTATTTTGTTGGGGATACCATTTGTGAAATCTGCTAAGACCATGATGAATCTTCA
TAGGGATGTATTGTCTTTAGAGTATCGGGAGGAGATTGTTAAAGTTAGTATACCTAAGGTTGTTAAGTATCCTGATACTTCTGCTTCCCTTTACCAAATTGAGGTAGTTG
ATTTTGTAGTGCAGGATGTTCCAGCGGAATCTGAGTGGGTTTCATTTCAGATCTGGGCGTTTTCAGGCGTTCTCCGGTGCACGGGACCCTCGACATCTCTAGGCGTTCTT
CGACGAGCACGGGACCCACGACGGCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAATTTACCCAGAAATGCGACCGCATTTCTGGAAAAACAGAGGCAGTTCCGAGTCTTCCGCGGGTCGTTTTGAACGAGACTTATTCGCACCTAACTGGCTACTT
TGCATGCTATGTGAGTTTGATCTCGAAAGGGACAGACGATATCGGTTCTCATAAAGGTGAAATTAACCGAGAGTGTCTCGACGCTGTGGTCATAGCGTCTCGACGCTATG
ACCTTTTGCCACCTGATCAGAGAAAGAAAAATATGAGCGTCGAGACGCCCTGTCCTCGTGGGATCGATACCCTTGGAATACTTCTAAGGTTTTTATTGCTACGTGTGATA
CTGTATACTTGCACTAAGGTTGGCGACGCTGAAGCAAGCTTACGTTTTGCTGCATCTATTTTGTTGGGGATACCATTTGTGAAATCTGCTAAGACCATGATGAATCTTCA
TAGGGATGTATTGTCTTTAGAGTATCGGGAGGAGATTGTTAAAGTTAGTATACCTAAGGTTGTTAAGTATCCTGATACTTCTGCTTCCCTTTACCAAATTGAGGTAGTTG
ATTTTGTAGTGCAGGATGTTCCAGCGGAATCTGAGTGGGTTTCATTTCAGATCTGGGCGTTTTCAGGCGTTCTCCGGTGCACGGGACCCTCGACATCTCTAGGCGTTCTT
CGACGAGCACGGGACCCACGACGGCGATAG
Protein sequenceShow/hide protein sequence
MLEFTQKCDRISGKTEAVPSLPRVVLNETYSHLTGYFACYVSLISKGTDDIGSHKGEINRECLDAVVIASRRYDLLPPDQRKKNMSVETPCPRGIDTLGILLRFLLLRVI
LYTCTKVGDAEASLRFAASILLGIPFVKSAKTMMNLHRDVLSLEYREEIVKVSIPKVVKYPDTSASLYQIEVVDFVVQDVPAESEWVSFQIWAFSGVLRCTGPSTSLGVL
RRARDPRRR