; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg021019 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021019
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold9:2318201..2321459
RNA-Seq ExpressionSpg021019
SyntenySpg021019
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MQM14562.1 hypothetical protein [Colocasia esculenta]4.4e-2544.07Show/hide
Query:  IAQKYINAEELMKSKRAEREAQKGE------GRDRPGLKGK-----------FEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRD
        IAQ++   EE + + RAE+  Q  +      G DR   KG+           F  YTPL++ P+++L+ I++   V+ P RMR+DP KRD+NKYC FHRD
Subjt:  IAQKYINAEELMKSKRAEREAQKGE------GRDRPGLKGK-----------FEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRD

Query:  HGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDP-PLEIKTILGG-PAGGESNRKRKAVAR
        HGH+T  C QL+DEIE LIK GYL+ FV+  E R     R      N++P   EI  I GG  AGGES R R+  AR
Subjt:  HGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDP-PLEIKTILGG-PAGGESNRKRKAVAR

XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]6.1e-2740.78Show/hide
Query:  AQKYINAEELMKSKR----------AEREAQKGEG-----RDRPGLKG---KFEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRD
        AQ+Y++A E   SKR           ER   K +G     RDR   K    KFEKYT  ++P ++VL  IK+  L+K P+RM    +KR K +YC FH D
Subjt:  AQKYINAEELMKSKR----------AEREAQKGEG-----RDRPGLKG---KFEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRD

Query:  HGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFELEEQRVYSVRVSKGLPPVEF
        HGH T+ C  L++E+E LI  GYLKE+V+        P    +   +  P  EI+TI+GGP   ES RKRK   REAR   E+  VY V  +     +EF
Subjt:  HGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFELEEQRVYSVRVSKGLPPVEF

Query:  TEIEAS
        +E EA+
Subjt:  TEIEAS

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.0e-2941.75Show/hide
Query:  AQKYINAEELMKSKR----------AEREAQKGEG-----RDRPGLKG---KFEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRD
        AQ+Y++A E   SKR           ER   K +G     RDR   K    KFEKYTP ++P ++VL  IK   L+K P+RM+   +KR K +YC FHRD
Subjt:  AQKYINAEELMKSKR----------AEREAQKGEG-----RDRPGLKG---KFEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRD

Query:  HGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFELEEQRVYSVRVSKGLPPVEF
        HGH T+ C  L++E+E LI+ GYLKE+V+        P    +   +  P  EI+TI+GGP   ES RKRKA  REAR   E+  VY    +     +EF
Subjt:  HGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFELEEQRVYSVRVSKGLPPVEF

Query:  TEIEAS
        +E EA+
Subjt:  TEIEAS

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]1.5e-2544.13Show/hide
Query:  AQKYINAEEL------MKSKRAERE---------AQKGEGRDR----PGLKGKFEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHR
        AQKY++AEE       ++ KRA+++         + K E +DR      L  KFEKYTP ++P ++VL  IK   L+K P+ M+  P+KR K +YC FHR
Subjt:  AQKYINAEEL------MKSKRAERE---------AQKGEGRDR----PGLKGKFEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHR

Query:  DHGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREAR
        DHGH T  C  L++E+E LI++GYLKE+V   +     P RE+    N  P  EI+TI+GG    ES+RKRKA  REAR
Subjt:  DHGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREAR

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.0e-2640.29Show/hide
Query:  AQKYINAEELMKSKR----------AEREAQKGEG-----RDRPGLKG---KFEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRD
        AQ+Y++A E   SKR           ER   K +G     RDR   K    KFEKYTP ++P ++VL  IK   L+K P+RM+   +KR K +YC FHRD
Subjt:  AQKYINAEELMKSKR----------AEREAQKGEG-----RDRPGLKG---KFEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRD

Query:  HGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFELEEQRVYSVRVSKGLPPVEF
        H H T+    L++E+E LI+ GYL+E+V+        P    +      P  EI+TI+GGP   ES RKRKA  REAR   E+  VY    +     +EF
Subjt:  HGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFELEEQRVYSVRVSKGLPPVEF

Query:  TEIEAS
        +E EA+
Subjt:  TEIEAS

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128052.9e-2740.78Show/hide
Query:  AQKYINAEELMKSKR----------AEREAQKGEG-----RDRPGLKG---KFEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRD
        AQ+Y++A E   SKR           ER   K +G     RDR   K    KFEKYT  ++P ++VL  IK+  L+K P+RM    +KR K +YC FH D
Subjt:  AQKYINAEELMKSKR----------AEREAQKGEG-----RDRPGLKG---KFEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRD

Query:  HGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFELEEQRVYSVRVSKGLPPVEF
        HGH T+ C  L++E+E LI  GYLKE+V+        P    +   +  P  EI+TI+GGP   ES RKRK   REAR   E+  VY V  +     +EF
Subjt:  HGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFELEEQRVYSVRVSKGLPPVEF

Query:  TEIEAS
        +E EA+
Subjt:  TEIEAS

A0A6J1DWY0 uncharacterized protein LOC1110252934.9e-3041.75Show/hide
Query:  AQKYINAEELMKSKR----------AEREAQKGEG-----RDRPGLKG---KFEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRD
        AQ+Y++A E   SKR           ER   K +G     RDR   K    KFEKYTP ++P ++VL  IK   L+K P+RM+   +KR K +YC FHRD
Subjt:  AQKYINAEELMKSKR----------AEREAQKGEG-----RDRPGLKG---KFEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRD

Query:  HGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFELEEQRVYSVRVSKGLPPVEF
        HGH T+ C  L++E+E LI+ GYLKE+V+        P    +   +  P  EI+TI+GGP   ES RKRKA  REAR   E+  VY    +     +EF
Subjt:  HGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFELEEQRVYSVRVSKGLPPVEF

Query:  TEIEAS
        +E EA+
Subjt:  TEIEAS

A0A6J1DYL6 uncharacterized protein LOC1110257855.0e-2740.29Show/hide
Query:  AQKYINAEELMKSKR----------AEREAQKGEG-----RDRPGLKG---KFEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRD
        AQ+Y++A E   SKR           ER   K +G     RDR   K    KFEKYTP ++P ++VL  IK   L+K P+RM+   +KR K +YC FHRD
Subjt:  AQKYINAEELMKSKR----------AEREAQKGEG-----RDRPGLKG---KFEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRD

Query:  HGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFELEEQRVYSVRVSKGLPPVEF
        H H T+    L++E+E LI+ GYL+E+V+        P    +      P  EI+TI+GGP   ES RKRKA  REAR   E+  VY    +     +EF
Subjt:  HGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFELEEQRVYSVRVSKGLPPVEF

Query:  TEIEAS
        +E EA+
Subjt:  TEIEAS

A0A6J1DZ52 uncharacterized protein LOC1110256127.3e-2644.13Show/hide
Query:  AQKYINAEEL------MKSKRAERE---------AQKGEGRDR----PGLKGKFEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHR
        AQKY++AEE       ++ KRA+++         + K E +DR      L  KFEKYTP ++P ++VL  IK   L+K P+ M+  P+KR K +YC FHR
Subjt:  AQKYINAEEL------MKSKRAERE---------AQKGEGRDR----PGLKGKFEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHR

Query:  DHGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREAR
        DHGH T  C  L++E+E LI++GYLKE+V   +     P RE+    N  P  EI+TI+GG    ES+RKRKA  REAR
Subjt:  DHGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREAR

A0A6J1DZB9 uncharacterized protein LOC1110249045.7e-2342.68Show/hide
Query:  SKRAEREAQKGEGRDRPGLKGKFEKYTPLSIPPDRVLSAIKHT---ELVKRPDRMRTDPSKRDKNKYCAFHRDHGHNTRYCIQLRDEIESLIKEGYLKEF
        S+   R  + G  R RP     +E+YT  +IP   +L+ I+ +   +L+KRP+++R D  KR+K KYC FHRDHGHNT  C +L+ +IE LI++GY K+F
Subjt:  SKRAEREAQKGEGRDRPGLKGKFEKYTPLSIPPDRVLSAIKHT---ELVKRPDRMRTDPSKRDKNKYCAFHRDHGHNTRYCIQLRDEIESLIKEGYLKEF

Query:  V----------KGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFEL
        V          K E  R   P R +      D P  I TI GGP GG+S  KRK +AREAR E+
Subjt:  V----------KGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFEL

SwissProt top hitse value%identityAlignment
A1S462 Translation initiation factor IF-25.2e-0543.48Show/hide
Query:  EAEAEARNRERTELETRIRAELGIKLRAEAEAAARAKVEAEAEAKARASIPKDTQPRNVDKENLENIIAQKYINAEELMKSKRAEREAQKGE
        EA A+A  + + E E + +AE   K +A+AEA A+AK EAEA+AKA AS  K+ QP+ V+ E  +   A+     EE  KSK A+ EA   E
Subjt:  EAEAEARNRERTELETRIRAELGIKLRAEAEAAARAKVEAEAEAKARASIPKDTQPRNVDKENLENIIAQKYINAEELMKSKRAEREAQKGE

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAGGGAAACCAGGTAGGTGAGGGAGATTTTCGGCCTAAGGCTAATACCCCGGATGCGGATATGGAAGCCCTCAGAGGGAGGGTGAGCGAGATGGGGCAGAGTCT
GGCTGAGATTCTGAGTATCTTGAAGCAACTGAATCCCAGCACGAAGTATCAAAAGAGCTTCGTACGAGATCGTGAGAAGGGGAAAGGGATCTTAGATGAGGAAGAGGGGG
AAACAAACAGTGCAACCAGCAAGTTGCGCAAACCAAAGGGTGGCAAGGAATTCGAATTGAAGGAGCCAGGGCCGAGCAAATGGGTAGAGCTCAAGGGCACACTTGGAGCT
CCAGATGCAACCAGTACAATGGGTTCGGGCTGGAGGGCCGAGGCCGAGGCCGAGGCCAGGAATCGGGAAAGGACTGAACTTGAAACGAGGATCCGCGCCGAGCTGGGGAT
TAAGTTGAGGGCCGAAGCCGAGGCCGCGGCCAGGGCCAAGGTCGAGGCTGAGGCTGAGGCCAAAGCTAGAGCCAGTATTCCGAAGGATACACAGCCCAGGAATGTAGATA
AGGAAAATCTAGAAAATATAATAGCACAAAAGTACATAAACGCGGAGGAGTTAATGAAGTCCAAGCGGGCAGAGAGGGAAGCACAAAAGGGGGAAGGCCGAGACCGACCA
GGTCTAAAGGGTAAGTTTGAAAAGTATACACCCCTTTCCATTCCACCTGACCGTGTTCTGTCAGCAATAAAGCATACAGAATTGGTGAAGCGTCCGGACAGGATGAGAAC
GGATCCTAGCAAGAGGGATAAGAACAAGTATTGTGCGTTTCATCGGGACCATGGACATAACACACGATATTGCATACAACTCCGAGACGAGATAGAGAGTCTGATCAAAG
AAGGATATCTGAAGGAGTTTGTCAAGGGAGAGGAGAGCAGGGGGCCGAGGCCGGCCAGAGAAGATCATAATGGAGGAAATCATGACCCCCCGTTGGAAATCAAAACCATT
TTAGGAGGGCCAGCAGGGGGGGAGTCGAATCGAAAGAGGAAGGCAGTGGCCCGAGAAGCAAGGTTTGAGCTTGAAGAGCAAAGAGTGTACTCAGTAAGGGTCTCAAAAGG
GTTGCCGCCAGTAGAGTTCACTGAGATAGAGGCCTCCGGATTTGCGTTTATTGATGGCGCTCGGTGGAGTGGCAATGCCTATACTCCCCGGGCTAATCAATCTATGAAAA
GGCCTTGTAGGAGTGGCAACGCCTATACTCCTAGGGTGCTCGGTGGAACGGCAACGTCTGTACTCCCCGAGGTAACAAACTTGCAGGAATGGCTTTGGAGACTTTGGAGG
AGTGGCAATGCCTGCACTCCACAGGGCAAACAGCGACCGGTAGAACTTCAAGAAAGGAGTCATACCGGTAGAAGAGGGTGCAGAGACGTTAAAGCTCCATGGCGCAATAG
TATCATGGTGGAAGGGTTTGCTCTGCTCCAGTGGCCAAGTTGTGGTCGGCCTCGGCATTTTCCCAAGGCCGACCATGTTCGTTTGTTTCAGCTTAATCTCATTCAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAGGGAAACCAGGTAGGTGAGGGAGATTTTCGGCCTAAGGCTAATACCCCGGATGCGGATATGGAAGCCCTCAGAGGGAGGGTGAGCGAGATGGGGCAGAGTCT
GGCTGAGATTCTGAGTATCTTGAAGCAACTGAATCCCAGCACGAAGTATCAAAAGAGCTTCGTACGAGATCGTGAGAAGGGGAAAGGGATCTTAGATGAGGAAGAGGGGG
AAACAAACAGTGCAACCAGCAAGTTGCGCAAACCAAAGGGTGGCAAGGAATTCGAATTGAAGGAGCCAGGGCCGAGCAAATGGGTAGAGCTCAAGGGCACACTTGGAGCT
CCAGATGCAACCAGTACAATGGGTTCGGGCTGGAGGGCCGAGGCCGAGGCCGAGGCCAGGAATCGGGAAAGGACTGAACTTGAAACGAGGATCCGCGCCGAGCTGGGGAT
TAAGTTGAGGGCCGAAGCCGAGGCCGCGGCCAGGGCCAAGGTCGAGGCTGAGGCTGAGGCCAAAGCTAGAGCCAGTATTCCGAAGGATACACAGCCCAGGAATGTAGATA
AGGAAAATCTAGAAAATATAATAGCACAAAAGTACATAAACGCGGAGGAGTTAATGAAGTCCAAGCGGGCAGAGAGGGAAGCACAAAAGGGGGAAGGCCGAGACCGACCA
GGTCTAAAGGGTAAGTTTGAAAAGTATACACCCCTTTCCATTCCACCTGACCGTGTTCTGTCAGCAATAAAGCATACAGAATTGGTGAAGCGTCCGGACAGGATGAGAAC
GGATCCTAGCAAGAGGGATAAGAACAAGTATTGTGCGTTTCATCGGGACCATGGACATAACACACGATATTGCATACAACTCCGAGACGAGATAGAGAGTCTGATCAAAG
AAGGATATCTGAAGGAGTTTGTCAAGGGAGAGGAGAGCAGGGGGCCGAGGCCGGCCAGAGAAGATCATAATGGAGGAAATCATGACCCCCCGTTGGAAATCAAAACCATT
TTAGGAGGGCCAGCAGGGGGGGAGTCGAATCGAAAGAGGAAGGCAGTGGCCCGAGAAGCAAGGTTTGAGCTTGAAGAGCAAAGAGTGTACTCAGTAAGGGTCTCAAAAGG
GTTGCCGCCAGTAGAGTTCACTGAGATAGAGGCCTCCGGATTTGCGTTTATTGATGGCGCTCGGTGGAGTGGCAATGCCTATACTCCCCGGGCTAATCAATCTATGAAAA
GGCCTTGTAGGAGTGGCAACGCCTATACTCCTAGGGTGCTCGGTGGAACGGCAACGTCTGTACTCCCCGAGGTAACAAACTTGCAGGAATGGCTTTGGAGACTTTGGAGG
AGTGGCAATGCCTGCACTCCACAGGGCAAACAGCGACCGGTAGAACTTCAAGAAAGGAGTCATACCGGTAGAAGAGGGTGCAGAGACGTTAAAGCTCCATGGCGCAATAG
TATCATGGTGGAAGGGTTTGCTCTGCTCCAGTGGCCAAGTTGTGGTCGGCCTCGGCATTTTCCCAAGGCCGACCATGTTCGTTTGTTTCAGCTTAATCTCATTCAG
Protein sequenceShow/hide protein sequence
MEQGNQVGEGDFRPKANTPDADMEALRGRVSEMGQSLAEILSILKQLNPSTKYQKSFVRDREKGKGILDEEEGETNSATSKLRKPKGGKEFELKEPGPSKWVELKGTLGA
PDATSTMGSGWRAEAEAEARNRERTELETRIRAELGIKLRAEAEAAARAKVEAEAEAKARASIPKDTQPRNVDKENLENIIAQKYINAEELMKSKRAEREAQKGEGRDRP
GLKGKFEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRDHGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTI
LGGPAGGESNRKRKAVAREARFELEEQRVYSVRVSKGLPPVEFTEIEASGFAFIDGARWSGNAYTPRANQSMKRPCRSGNAYTPRVLGGTATSVLPEVTNLQEWLWRLWR
SGNACTPQGKQRPVELQERSHTGRRGCRDVKAPWRNSIMVEGFALLQWPSCGRPRHFPKADHVRLFQLNLIQ