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Spg021024 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021024
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold9:467324..479129
RNA-Seq ExpressionSpg021024
SyntenySpg021024
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032146.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.6e-1565.28Show/hide
Query:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLE
        MS++   GK   +RLVEIEEQ+LYL EVPDS+RY+ESR+DEISEK   IDAV  R++GLP+QEL  RV+TLE
Subjt:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLE

KAA0065910.1 senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa]1.5e-1668.49Show/hide
Query:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLES
        MS+    GK+  +RLVEIEEQ+LYL EVPDS+RY+ESRLDEISEK+  IDAV  RI+GLP+QEL  RVETLE+
Subjt:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLES

XP_022150099.1 uncharacterized protein LOC111018360 [Momordica charantia]3.3e-2474.71Show/hide
Query:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLESKATKPVS-EAYDSS
        MS TKQ+ K+HV+RLVEIEEQLLYLREVPD +R +E+R+DE SEK GEIDAVNARIDGLP+Q++A+RVETLESKAT+P S E  DSS
Subjt:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLESKATKPVS-EAYDSS

XP_022154605.1 uncharacterized protein LOC111021829 [Momordica charantia]1.1e-2474.71Show/hide
Query:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLESKATKPVS-EAYDSS
        MSATKQ+ K+HV+RLVEIEEQLLYLREVPDS+R +E+R+DE SEK GEIDAVNAR+DGLP+Q++A+RVET ESKAT+P S E  DSS
Subjt:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLESKATKPVS-EAYDSS

XP_022155185.1 uncharacterized protein LOC111022320 [Momordica charantia]1.1e-1968.83Show/hide
Query:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLESKATK
        MS TKQ+GK+H++RLVEIEE+LL+LRE+PD++RYVESRLDEIS K   ID VNARIDGL ++EL +RVETLE K  +
Subjt:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLESKATK

TrEMBL top hitse value%identityAlignment
A0A5A7VFC8 Senescence-specific cysteine protease sag397.2e-1768.49Show/hide
Query:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLES
        MS+    GK+  +RLVEIEEQ+LYL EVPDS+RY+ESRLDEISEK+  IDAV  RI+GLP+QEL  RVETLE+
Subjt:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLES

A0A5D3CRH9 Ty3-gypsy retrotransposon protein1.8e-1565.28Show/hide
Query:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLE
        MS++   GK   +RLVEIEEQ+LYL EVPDS+RY+ESR+DEISEK   IDAV  R++GLP+QEL  RV+TLE
Subjt:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLE

A0A6J1D906 Reverse transcriptase1.6e-2474.71Show/hide
Query:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLESKATKPVS-EAYDSS
        MS TKQ+ K+HV+RLVEIEEQLLYLREVPD +R +E+R+DE SEK GEIDAVNARIDGLP+Q++A+RVETLESKAT+P S E  DSS
Subjt:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLESKATKPVS-EAYDSS

A0A6J1DK29 uncharacterized protein LOC1110218295.5e-2574.71Show/hide
Query:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLESKATKPVS-EAYDSS
        MSATKQ+ K+HV+RLVEIEEQLLYLREVPDS+R +E+R+DE SEK GEIDAVNAR+DGLP+Q++A+RVET ESKAT+P S E  DSS
Subjt:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLESKATKPVS-EAYDSS

A0A6J1DLQ6 uncharacterized protein LOC1110223205.3e-2068.83Show/hide
Query:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLESKATK
        MS TKQ+GK+H++RLVEIEE+LL+LRE+PD++RYVESRLDEIS K   ID VNARIDGL ++EL +RVETLE K  +
Subjt:  MSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVETLESKATK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACTCTTGTACGGGTAGCTGATAGCGAGCAGAAATATCGCTATTTTCGTCCCAATTTATTAGGCTTTTCTGGCAGCGTCGAGACGCTATGTAAGCAGCGTCGCGA
CGCTACCCTTTTCGTGTTGCCCAAGCCGCGTGCGTTGCAGCGTCGCGACGCTGTGCAATGTAGCGTCGCGACGCTACCCCCATTCCGGGCCTATAAAAAGGCACCCTTGG
GTGCCTCATTTACCATCAATCAATTCATTCTTCAATCCATTCTTTCCTTCCTTTGGCTCCTTTGGAGCCTCTCTCAAGGCTTTCTAGCCTTTTTGAGAGAATTCTTTAGT
GGGAAATATTTTGGGGAATTTTGGGAGCATCTTAGGAAGCTCAAAGGAGTGTTCGGCGGAGCTCTGAGCGCCAAGCGAAGGGAGTTGCCTGACATTGAGGATGAGCATGA
AATGCATAAAAAAGATTACTTGGTAGATAATTTTGAGTCTGATCGTGATTACACTGAATCTATTGAGTCTGATCTTGACATTCCTGAATGCATGAACCCTGATAATGTTA
ATACCTTTGATTCGTGTCCTGATGATGTATATAGCATAGAAACTGACCCAGAGGAACTCGAATCTGTGCATAGTATAGAATCTGACCCTGAAGAGCTTGAATTCTTTAAT
TCTGATAGTGAGTCATGTGATAGCCTAGTTGAATCATTTTTTAATACTGAGTCTGAGGAATCTGAGGAGCATGTAAATGTTTTTTCTGATGAATGGTCTGGCATGATTGA
TAGGCCATCTTTAGATCCTAGACCGGTAGATATTATAACTCTTGATGACTCTGTTAACAATTGCTTTGTGAATAGAGACTTAGAAAAGAGATTTGATGCTGTTACATATT
TTCTGCAATGTTATTATGATAATCTCTTTAGTGATGATGGGCCAGGGGAAAGTTTTTTTTCTCCCCTGTTTGCGGGCAGCGTCGAGACGCTATGTAAGCAGCGTCGCGAC
GCTACCCTTTTCGTGTTGCCCAAGCCGCGTGCGTTGTGTCTTGAGCATGCTTGTCCAGGGCGAGCTGTGCCTATGGCCGCATGTCCAAACCATCCTCACCCATCATGTTT
TAATGCCATCATGTCGGCGACCAAACAAATGGGCAAGACCCACGTTGAGCGACTCGTTGAGATAGAGGAACAGTTGCTGTATTTGAGAGAAGTACCTGACTCGGTACGAT
ACGTCGAAAGTCGACTTGATGAGATCTCTGAAAAGTTGGGCGAGATAGATGCAGTGAATGCCCGAATTGATGGGCTACCTGTACAAGAGTTGGCAATAAGGGTAGAGACC
CTGGAAAGTAAAGCTACAAAGCCTGTTTCGGAGGCGTATGACTCCTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAACTCTTGTACGGGTAGCTGATAGCGAGCAGAAATATCGCTATTTTCGTCCCAATTTATTAGGCTTTTCTGGCAGCGTCGAGACGCTATGTAAGCAGCGTCGCGA
CGCTACCCTTTTCGTGTTGCCCAAGCCGCGTGCGTTGCAGCGTCGCGACGCTGTGCAATGTAGCGTCGCGACGCTACCCCCATTCCGGGCCTATAAAAAGGCACCCTTGG
GTGCCTCATTTACCATCAATCAATTCATTCTTCAATCCATTCTTTCCTTCCTTTGGCTCCTTTGGAGCCTCTCTCAAGGCTTTCTAGCCTTTTTGAGAGAATTCTTTAGT
GGGAAATATTTTGGGGAATTTTGGGAGCATCTTAGGAAGCTCAAAGGAGTGTTCGGCGGAGCTCTGAGCGCCAAGCGAAGGGAGTTGCCTGACATTGAGGATGAGCATGA
AATGCATAAAAAAGATTACTTGGTAGATAATTTTGAGTCTGATCGTGATTACACTGAATCTATTGAGTCTGATCTTGACATTCCTGAATGCATGAACCCTGATAATGTTA
ATACCTTTGATTCGTGTCCTGATGATGTATATAGCATAGAAACTGACCCAGAGGAACTCGAATCTGTGCATAGTATAGAATCTGACCCTGAAGAGCTTGAATTCTTTAAT
TCTGATAGTGAGTCATGTGATAGCCTAGTTGAATCATTTTTTAATACTGAGTCTGAGGAATCTGAGGAGCATGTAAATGTTTTTTCTGATGAATGGTCTGGCATGATTGA
TAGGCCATCTTTAGATCCTAGACCGGTAGATATTATAACTCTTGATGACTCTGTTAACAATTGCTTTGTGAATAGAGACTTAGAAAAGAGATTTGATGCTGTTACATATT
TTCTGCAATGTTATTATGATAATCTCTTTAGTGATGATGGGCCAGGGGAAAGTTTTTTTTCTCCCCTGTTTGCGGGCAGCGTCGAGACGCTATGTAAGCAGCGTCGCGAC
GCTACCCTTTTCGTGTTGCCCAAGCCGCGTGCGTTGTGTCTTGAGCATGCTTGTCCAGGGCGAGCTGTGCCTATGGCCGCATGTCCAAACCATCCTCACCCATCATGTTT
TAATGCCATCATGTCGGCGACCAAACAAATGGGCAAGACCCACGTTGAGCGACTCGTTGAGATAGAGGAACAGTTGCTGTATTTGAGAGAAGTACCTGACTCGGTACGAT
ACGTCGAAAGTCGACTTGATGAGATCTCTGAAAAGTTGGGCGAGATAGATGCAGTGAATGCCCGAATTGATGGGCTACCTGTACAAGAGTTGGCAATAAGGGTAGAGACC
CTGGAAAGTAAAGCTACAAAGCCTGTTTCGGAGGCGTATGACTCCTCGTGA
Protein sequenceShow/hide protein sequence
MPTLVRVADSEQKYRYFRPNLLGFSGSVETLCKQRRDATLFVLPKPRALQRRDAVQCSVATLPPFRAYKKAPLGASFTINQFILQSILSFLWLLWSLSQGFLAFLREFFS
GKYFGEFWEHLRKLKGVFGGALSAKRRELPDIEDEHEMHKKDYLVDNFESDRDYTESIESDLDIPECMNPDNVNTFDSCPDDVYSIETDPEELESVHSIESDPEELEFFN
SDSESCDSLVESFFNTESEESEEHVNVFSDEWSGMIDRPSLDPRPVDIITLDDSVNNCFVNRDLEKRFDAVTYFLQCYYDNLFSDDGPGESFFSPLFAGSVETLCKQRRD
ATLFVLPKPRALCLEHACPGRAVPMAACPNHPHPSCFNAIMSATKQMGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELAIRVET
LESKATKPVSEAYDSS