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Spg021072 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021072
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold9:767225..771629
RNA-Seq ExpressionSpg021072
SyntenySpg021072
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065910.1 senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa]1.8e-1364.18Show/hide
Query:  KTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKT
        K+  +RLVEIEEQ+L+L EVPDS+RY+E R++EISEK+  IDA+  RI+GLP+QEL  RVETLE+ T
Subjt:  KTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKT

KAA0066144.1 Endo-1,4-beta-xylanase A [Cucumis melo var. makuwa]6.7e-1347.73Show/hide
Query:  TVEKLAKTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKTTKSGAKRSQRLDAAT
        + + L K   +RL E+EEQ+L+L EVPDS+RY+E   EEISEK   IDA+  R++GLP+QEL +RV+TLE+ T        +R+D+++
Subjt:  TVEKLAKTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKTTKSGAKRSQRLDAAT

XP_022150099.1 uncharacterized protein LOC111018360 [Momordica charantia]1.9e-2063.64Show/hide
Query:  TVEKLAKTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKTTKSGAKRSQRLDAAT
        T ++L+K+HV+RLVEIEEQLL+LREVPD +R +E R++E SEK GEIDA+NARIDGLP+Q++A+RVETLESK T+ G+   +R D++T
Subjt:  TVEKLAKTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKTTKSGAKRSQRLDAAT

XP_022154605.1 uncharacterized protein LOC111021829 [Momordica charantia]7.4e-2062.79Show/hide
Query:  EKLAKTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKTTKSGAKRSQRLDAAT
        ++L+K+HV+RLVEIEEQLL+LREVPDS+R +E R++E SEK GEIDA+NAR+DGLP+Q++A+RVET ESK T+ G+   +R D++T
Subjt:  EKLAKTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKTTKSGAKRSQRLDAAT

XP_022155185.1 uncharacterized protein LOC111022320 [Momordica charantia]2.9e-1661.84Show/hide
Query:  TVEKLAKTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKTTKS
        T ++L K+H++RLVEIEE+LLFLRE+PD++RYVE R++EIS K   ID +NARIDGL ++EL LRVETLE K  ++
Subjt:  TVEKLAKTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKTTKS

TrEMBL top hitse value%identityAlignment
A0A5A7VFC8 Senescence-specific cysteine protease sag398.6e-1464.18Show/hide
Query:  KTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKT
        K+  +RLVEIEEQ+L+L EVPDS+RY+E R++EISEK+  IDA+  RI+GLP+QEL  RVETLE+ T
Subjt:  KTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKT

A0A5D3CYE2 Endo-1,4-beta-xylanase A3.3e-1347.73Show/hide
Query:  TVEKLAKTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKTTKSGAKRSQRLDAAT
        + + L K   +RL E+EEQ+L+L EVPDS+RY+E   EEISEK   IDA+  R++GLP+QEL +RV+TLE+ T        +R+D+++
Subjt:  TVEKLAKTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKTTKSGAKRSQRLDAAT

A0A6J1D906 Reverse transcriptase9.4e-2163.64Show/hide
Query:  TVEKLAKTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKTTKSGAKRSQRLDAAT
        T ++L+K+HV+RLVEIEEQLL+LREVPD +R +E R++E SEK GEIDA+NARIDGLP+Q++A+RVETLESK T+ G+   +R D++T
Subjt:  TVEKLAKTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKTTKSGAKRSQRLDAAT

A0A6J1DK29 uncharacterized protein LOC1110218293.6e-2062.79Show/hide
Query:  EKLAKTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKTTKSGAKRSQRLDAAT
        ++L+K+HV+RLVEIEEQLL+LREVPDS+R +E R++E SEK GEIDA+NAR+DGLP+Q++A+RVET ESK T+ G+   +R D++T
Subjt:  EKLAKTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKTTKSGAKRSQRLDAAT

A0A6J1DLQ6 uncharacterized protein LOC1110223201.4e-1661.84Show/hide
Query:  TVEKLAKTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKTTKS
        T ++L K+H++RLVEIEE+LLFLRE+PD++RYVE R++EIS K   ID +NARIDGL ++EL LRVETLE K  ++
Subjt:  TVEKLAKTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEKLGEIDAMNARIDGLPVQELALRVETLESKTTKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCCCGAGGCTCGGGATGGCATCGTGAAGCATCAGTGGAACCCGATAGTTTCGGTTGGCACGGTATTTGCCCGAAATGTCCCGGTAAGCATTATAATGGCCCGAT
AAGCCCCGATAGGCGACGAAAAGCCCCGGATGAAGAACCTCGCCTAAGGTCCGATGAAGCACCGAAGTCGCGTGTAAGATCATGGCGCCGCACGGTTGAAAAGTTGGCGA
AGACACATGTTGAGCGACTTGTTGAGATAGAAGAACAGTTGCTTTTCCTGAGGGAAGTACCGGACTCGGTACGATACGTTGAACATCGAATTGAAGAGATCTCCGAAAAG
CTGGGTGAGATCGATGCGATGAATGCCCGAATTGATGGGCTACCCGTACAAGAGCTGGCATTGAGGGTTGAGACCCTAGAAAGCAAGACTACGAAGTCTGGCGCGAAACG
GTCACAGCGTCTCGACGCTGCGACCTTAGCGTCTCGACGCTGTATAGGGATATCGGGTTCAATTGCATATGGGAGAATCATGTATGCTCGGGAGAGATATGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACATCCCGAGGCTCGGGATGGCATCGTGAAGCATCAGTGGAACCCGATAGTTTCGGTTGGCACGGTATTTGCCCGAAATGTCCCGGTAAGCATTATAATGGCCCGAT
AAGCCCCGATAGGCGACGAAAAGCCCCGGATGAAGAACCTCGCCTAAGGTCCGATGAAGCACCGAAGTCGCGTGTAAGATCATGGCGCCGCACGGTTGAAAAGTTGGCGA
AGACACATGTTGAGCGACTTGTTGAGATAGAAGAACAGTTGCTTTTCCTGAGGGAAGTACCGGACTCGGTACGATACGTTGAACATCGAATTGAAGAGATCTCCGAAAAG
CTGGGTGAGATCGATGCGATGAATGCCCGAATTGATGGGCTACCCGTACAAGAGCTGGCATTGAGGGTTGAGACCCTAGAAAGCAAGACTACGAAGTCTGGCGCGAAACG
GTCACAGCGTCTCGACGCTGCGACCTTAGCGTCTCGACGCTGTATAGGGATATCGGGTTCAATTGCATATGGGAGAATCATGTATGCTCGGGAGAGATATGTGTGA
Protein sequenceShow/hide protein sequence
MTSRGSGWHREASVEPDSFGWHGICPKCPGKHYNGPISPDRRRKAPDEEPRLRSDEAPKSRVRSWRRTVEKLAKTHVERLVEIEEQLLFLREVPDSVRYVEHRIEEISEK
LGEIDAMNARIDGLPVQELALRVETLESKTTKSGAKRSQRLDAATLASRRCIGISGSIAYGRIMYARERYV