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Spg021074 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021074
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransmembrane protein
Genome locationscaffold9:2064097..2066140
RNA-Seq ExpressionSpg021074
SyntenySpg021074
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003746 - translation elongation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037155.1 hypothetical protein SDJN02_00777, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-3889.62Show/hide
Query:  MSRSQSSRSLQFLFFLFSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEV
        MSRS+SS SLQFL FL SLSLHSLSVLAGDHSSAKD GKTKK DA +SPS GIK+LIICLGVVT IAFSVILFKLWQKKKREEQHARLLKLFEDDDELEV
Subjt:  MSRSQSSRSLQFLFFLFSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEV

Query:  ELGLRD
        ELGLRD
Subjt:  ELGLRD

KGN52701.1 hypothetical protein Csa_009261 [Cucumis sativus]3.8e-4089.72Show/hide
Query:  MSRSQSSRSLQFLFFLFS-LSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELE
        MS SQSSRSLQFLFF+FS +  HSLSVLA ++SSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVI FSVILFK+WQKKKREEQHARLLKLFEDDDELE
Subjt:  MSRSQSSRSLQFLFFLFS-LSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

XP_008459655.1 PREDICTED: uncharacterized protein LOC103498710 [Cucumis melo]1.5e-4191.59Show/hide
Query:  MSRSQSSRSLQFLFFLFS-LSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELE
        MS SQSSRSLQFLFFLF+ + LHSLSVLA D+SSAKDGGKTKKDD RRSPSMGIKILIICLGVVTVIAFSVILFK+WQKKKREEQHARLLKLFEDDDELE
Subjt:  MSRSQSSRSLQFLFFLFS-LSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

XP_023525282.1 uncharacterized protein LOC111788931 [Cucurbita pepo subsp. pepo]1.6e-3889.62Show/hide
Query:  MSRSQSSRSLQFLFFLFSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEV
        MSRS+SS SLQFL FL SLSLHSLSVLAGDHSSAKD GKTKK DA +SPS GIK+LIICLGVVT IAFSVILFKLWQKKKREEQHARLLKLFEDDDELEV
Subjt:  MSRSQSSRSLQFLFFLFSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEV

Query:  ELGLRD
        ELGLRD
Subjt:  ELGLRD

XP_038890666.1 uncharacterized protein LOC120080166 [Benincasa hispida]5.3e-4291.51Show/hide
Query:  MSRSQSSRSLQFLFFLFSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEV
        MS SQSSRSLQFLFF+F L LHSLSVLA DHSSAKDGGK+KKDDARRSPSM IKI+IICLGVVTVIAFSVILFK+WQKKKREEQHARLLKLFEDDDELEV
Subjt:  MSRSQSSRSLQFLFFLFSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEV

Query:  ELGLRD
        ELGLRD
Subjt:  ELGLRD

TrEMBL top hitse value%identityAlignment
A0A0A0KXZ0 Uncharacterized protein1.8e-4089.72Show/hide
Query:  MSRSQSSRSLQFLFFLFS-LSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELE
        MS SQSSRSLQFLFF+FS +  HSLSVLA ++SSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVI FSVILFK+WQKKKREEQHARLLKLFEDDDELE
Subjt:  MSRSQSSRSLQFLFFLFS-LSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

A0A1S3CA76 uncharacterized protein LOC1034987107.4e-4291.59Show/hide
Query:  MSRSQSSRSLQFLFFLFS-LSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELE
        MS SQSSRSLQFLFFLF+ + LHSLSVLA D+SSAKDGGKTKKDD RRSPSMGIKILIICLGVVTVIAFSVILFK+WQKKKREEQHARLLKLFEDDDELE
Subjt:  MSRSQSSRSLQFLFFLFS-LSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

A0A5A7TC90 Uncharacterized protein7.4e-4291.59Show/hide
Query:  MSRSQSSRSLQFLFFLFS-LSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELE
        MS SQSSRSLQFLFFLF+ + LHSLSVLA D+SSAKDGGKTKKDD RRSPSMGIKILIICLGVVTVIAFSVILFK+WQKKKREEQHARLLKLFEDDDELE
Subjt:  MSRSQSSRSLQFLFFLFS-LSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

A0A6J1EBZ0 uncharacterized protein LOC1114326781.2e-3684.11Show/hide
Query:  MSRSQSSRSLQFLFFLFSLSLHSLSVLAGDHSSAKDG-GKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELE
        MSRSQSSRSLQFL FLFSLSLHSLSVLA +HSSA++G GK KK D  RS SMGIKI++ICLGVVTVIAFSVIL K+WQ+KKREEQHARLLKLFEDDDELE
Subjt:  MSRSQSSRSLQFLFFLFSLSLHSLSVLAGDHSSAKDG-GKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        +ELGLRD
Subjt:  VELGLRD

A0A6J1GB46 uncharacterized protein LOC1114525612.5e-3787.74Show/hide
Query:  MSRSQSSRSLQFLFFLFSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEV
        MSRS+SS SLQ L FL SLSLHSLSVLAGDHSSAKD GKTKK DA +SPS GIK+LIICLGVVT IAF VILFKLWQKKKREEQHARLLKLFEDDDELEV
Subjt:  MSRSQSSRSLQFLFFLFSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEV

Query:  ELGLRD
        ELGLRD
Subjt:  ELGLRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09645.1 unknown protein7.4e-1852.13Show/hide
Query:  LFFLFSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
        L F  S+ L     L+GD  +   G KT+   +  S   G K++++ +G V V  FS  L+KLWQKKKR+EQ+ARLLKLFE+DDELEVELGLRD
Subjt:  LFFLFSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD

AT1G57765.1 unknown protein1.1e-1648.11Show/hide
Query:  MSRSQSSRSLQFLFFLFSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEV
        +S S  + S   L    S+ LH    ++GD +S+  G K +   +  S   G K++ I LG   V   S  L+KLWQKKKR+EQ+ARLLKLFE+DDELEV
Subjt:  MSRSQSSRSLQFLFFLFSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEV

Query:  ELGLRD
        ELGLRD
Subjt:  ELGLRD

AT1G57765.2 unknown protein8.2e-1753.19Show/hide
Query:  FFLFSLSLHSL-SVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
        FFL  L L S+   ++GD +S+  G K +   +  S   G K++ I LG   V   S  L+KLWQKKKR+EQ+ARLLKLFE+DDELEVELGLRD
Subjt:  FFLFSLSLHSL-SVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD

AT3G53490.1 unknown protein3.1e-0841.89Show/hide
Query:  SAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
        S K+ G T+K++ +     GI +LI+ L +  V    ++ +K W+KKKR+++ AR LKLFED D++E ELGL +
Subjt:  SAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCGATCTCAAAGCTCCAGATCTCTGCAATTCCTCTTCTTCCTCTTCTCGCTCTCTCTCCATTCTCTTTCAGTGTTGGCAGGTGACCATTCAAGTGCTAAAGATGG
TGGTAAAACTAAAAAGGACGATGCTCGGAGGAGTCCGTCGATGGGGATCAAGATATTAATCATATGTTTAGGAGTGGTGACTGTCATTGCCTTTTCTGTGATTCTATTCA
AGCTATGGCAAAAGAAGAAGAGAGAAGAGCAACATGCCCGTCTTCTCAAGCTGTTTGAAGATGATGATGAACTCGAAGTCGAACTTGGCCTTCGGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCGATCTCAAAGCTCCAGATCTCTGCAATTCCTCTTCTTCCTCTTCTCGCTCTCTCTCCATTCTCTTTCAGTGTTGGCAGGTGACCATTCAAGTGCTAAAGATGG
TGGTAAAACTAAAAAGGACGATGCTCGGAGGAGTCCGTCGATGGGGATCAAGATATTAATCATATGTTTAGGAGTGGTGACTGTCATTGCCTTTTCTGTGATTCTATTCA
AGCTATGGCAAAAGAAGAAGAGAGAAGAGCAACATGCCCGTCTTCTCAAGCTGTTTGAAGATGATGATGAACTCGAAGTCGAACTTGGCCTTCGGGATTGA
Protein sequenceShow/hide protein sequence
MSRSQSSRSLQFLFFLFSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD