; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg021116 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021116
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box/LRR-repeat protein
Genome locationscaffold9:3134954..3136052
RNA-Seq ExpressionSpg021116
SyntenySpg021116
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039267.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]5.1e-2952.48Show/hide
Query:  VPTLNLDFLSYPFTETSSENYFD--LKQTSFKNFIFKILSQHCGREIKRLSY-SSENADEEILVELLTCYARCHSVQELFIDTYSYSTYNWKHCLSAYSS
        +PTLN D+ S  F+ +SS NY D   K+ SFK FIF++LS+HC  +I++L+Y SS N DE +LVELL CYA  H+VQ+L I+TY+   Y W +C    SS
Subjt:  VPTLNLDFLSYPFTETSSENYFD--LKQTSFKNFIFKILSQHCGREIKRLSY-SSENADEEILVELLTCYARCHSVQELFIDTYSYSTYNWKHCLSAYSS

Query:  LTVLKIVFWFVDDWEVFVLPSLRILEIECDPYAYNYRKDYN
        L  LK+V  FVDDW V  LPSL+ILEI+CD  A + R +Y+
Subjt:  LTVLKIVFWFVDDWEVFVLPSLRILEIECDPYAYNYRKDYN

XP_008459617.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo]6.6e-2951.77Show/hide
Query:  VPTLNLDFLSYPFTETSSENYFD--LKQTSFKNFIFKILSQHCGREIKRLSY-SSENADEEILVELLTCYARCHSVQELFIDTYSYSTYNWKHCLSAYSS
        +PTLN D+ S  F+ +SS NY D   K+ SFK FIF++LS+HC  +I++L+Y SS N DE +LVELL CYA  H+VQ+L ++TY+   Y W +C    SS
Subjt:  VPTLNLDFLSYPFTETSSENYFD--LKQTSFKNFIFKILSQHCGREIKRLSY-SSENADEEILVELLTCYARCHSVQELFIDTYSYSTYNWKHCLSAYSS

Query:  LTVLKIVFWFVDDWEVFVLPSLRILEIECDPYAYNYRKDYN
        L  LK+V  FVDDW V  LPSL+ILEI+CD  A + R +Y+
Subjt:  LTVLKIVFWFVDDWEVFVLPSLRILEIECDPYAYNYRKDYN

XP_008459618.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X2 [Cucumis melo]6.6e-2951.77Show/hide
Query:  VPTLNLDFLSYPFTETSSENYFD--LKQTSFKNFIFKILSQHCGREIKRLSY-SSENADEEILVELLTCYARCHSVQELFIDTYSYSTYNWKHCLSAYSS
        +PTLN D+ S  F+ +SS NY D   K+ SFK FIF++LS+HC  +I++L+Y SS N DE +LVELL CYA  H+VQ+L ++TY+   Y W +C    SS
Subjt:  VPTLNLDFLSYPFTETSSENYFD--LKQTSFKNFIFKILSQHCGREIKRLSY-SSENADEEILVELLTCYARCHSVQELFIDTYSYSTYNWKHCLSAYSS

Query:  LTVLKIVFWFVDDWEVFVLPSLRILEIECDPYAYNYRKDYN
        L  LK+V  FVDDW V  LPSL+ILEI+CD  A + R +Y+
Subjt:  LTVLKIVFWFVDDWEVFVLPSLRILEIECDPYAYNYRKDYN

XP_022141791.1 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like [Momordica charantia]9.9e-3362.5Show/hide
Query:  VPTLNLDFLSYPFTETSSENYFDLKQTSFKNFIFKILSQHCGREIKRLSY-SSENADEEILVELLTCYARCHSVQELFIDTYSYSTYNWKHCLSAYSSLT
        +PTLN +F SYPF E S  N    KQ+SFKNFIF+ILS+ C  +I++LSY SS N DE +LVELL C+AR H+V+EL++DTY  S Y+WK+CLSA SSLT
Subjt:  VPTLNLDFLSYPFTETSSENYFDLKQTSFKNFIFKILSQHCGREIKRLSY-SSENADEEILVELLTCYARCHSVQELFIDTYSYSTYNWKHCLSAYSSLT

Query:  VLKIVFWFVDDWEVFVLPSLRILEIECD
        VLK+V  FV DW V  LPSLRILEIE +
Subjt:  VLKIVFWFVDDWEVFVLPSLRILEIECD

XP_038890214.1 F-box/LRR-repeat protein At3g26922-like [Benincasa hispida]9.9e-2547.86Show/hide
Query:  VPTLNLDFLSYPFTETS-SENYFDLKQTSFKNFIFKILSQHCGREIKRLSY-SSENADEEILVELLTCYARCHSVQELFIDTY-SYSTYNWKHCLSAYSS
        +PTLN D+ SY  + +S  +N  + K+ SFK FIF++LS+HC   I +L+Y +S+N DE +LVE L CYA   +VQ+L I+TY +   Y+W +C S  SS
Subjt:  VPTLNLDFLSYPFTETS-SENYFDLKQTSFKNFIFKILSQHCGREIKRLSY-SSENADEEILVELLTCYARCHSVQELFIDTY-SYSTYNWKHCLSAYSS

Query:  LTVLKIVFWFVDDWEVFVLPSLRILEIECDPYAYNYRKDY
        L  LK+V  FV DW V  +PSL+ILEIECD Y  +   +Y
Subjt:  LTVLKIVFWFVDDWEVFVLPSLRILEIECDPYAYNYRKDY

TrEMBL top hitse value%identityAlignment
A0A1S3CB41 F-box/LRR-repeat protein At3g26922-like isoform X13.2e-2951.77Show/hide
Query:  VPTLNLDFLSYPFTETSSENYFD--LKQTSFKNFIFKILSQHCGREIKRLSY-SSENADEEILVELLTCYARCHSVQELFIDTYSYSTYNWKHCLSAYSS
        +PTLN D+ S  F+ +SS NY D   K+ SFK FIF++LS+HC  +I++L+Y SS N DE +LVELL CYA  H+VQ+L ++TY+   Y W +C    SS
Subjt:  VPTLNLDFLSYPFTETSSENYFD--LKQTSFKNFIFKILSQHCGREIKRLSY-SSENADEEILVELLTCYARCHSVQELFIDTYSYSTYNWKHCLSAYSS

Query:  LTVLKIVFWFVDDWEVFVLPSLRILEIECDPYAYNYRKDYN
        L  LK+V  FVDDW V  LPSL+ILEI+CD  A + R +Y+
Subjt:  LTVLKIVFWFVDDWEVFVLPSLRILEIECDPYAYNYRKDYN

A0A1S3CBU6 F-box/LRR-repeat protein At3g26922-like isoform X23.2e-2951.77Show/hide
Query:  VPTLNLDFLSYPFTETSSENYFD--LKQTSFKNFIFKILSQHCGREIKRLSY-SSENADEEILVELLTCYARCHSVQELFIDTYSYSTYNWKHCLSAYSS
        +PTLN D+ S  F+ +SS NY D   K+ SFK FIF++LS+HC  +I++L+Y SS N DE +LVELL CYA  H+VQ+L ++TY+   Y W +C    SS
Subjt:  VPTLNLDFLSYPFTETSSENYFD--LKQTSFKNFIFKILSQHCGREIKRLSY-SSENADEEILVELLTCYARCHSVQELFIDTYSYSTYNWKHCLSAYSS

Query:  LTVLKIVFWFVDDWEVFVLPSLRILEIECDPYAYNYRKDYN
        L  LK+V  FVDDW V  LPSL+ILEI+CD  A + R +Y+
Subjt:  LTVLKIVFWFVDDWEVFVLPSLRILEIECDPYAYNYRKDYN

A0A5A7TCF1 F-box/LRR-repeat protein2.5e-2952.48Show/hide
Query:  VPTLNLDFLSYPFTETSSENYFD--LKQTSFKNFIFKILSQHCGREIKRLSY-SSENADEEILVELLTCYARCHSVQELFIDTYSYSTYNWKHCLSAYSS
        +PTLN D+ S  F+ +SS NY D   K+ SFK FIF++LS+HC  +I++L+Y SS N DE +LVELL CYA  H+VQ+L I+TY+   Y W +C    SS
Subjt:  VPTLNLDFLSYPFTETSSENYFD--LKQTSFKNFIFKILSQHCGREIKRLSY-SSENADEEILVELLTCYARCHSVQELFIDTYSYSTYNWKHCLSAYSS

Query:  LTVLKIVFWFVDDWEVFVLPSLRILEIECDPYAYNYRKDYN
        L  LK+V  FVDDW V  LPSL+ILEI+CD  A + R +Y+
Subjt:  LTVLKIVFWFVDDWEVFVLPSLRILEIECDPYAYNYRKDYN

A0A6J1CJ18 LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g568201.9e-1846.81Show/hide
Query:  VPTLNLDFLSYPFTET-SSENYFDLKQTSFKNFIFKILSQHCGREIKRLSYS-SENADEEI-LVELLTCYARCHSVQELFIDTYSYSTYNWKHCLSAYSS
        +PTLN DF SYPF ++  + +  + K+ SF+ FI ++LS+H  + I  L++S S ++D+ + L+E L CYA  H VQEL I TY    YNW   LS  SS
Subjt:  VPTLNLDFLSYPFTET-SSENYFDLKQTSFKNFIFKILSQHCGREIKRLSYS-SENADEEI-LVELLTCYARCHSVQELFIDTYSYSTYNWKHCLSAYSS

Query:  LTVLKIVFWFVDDWEVFVLPSLRILEIECDPYAYNYRKDYN
        L VLKI   FVDD       SLRILEIECD +   Y + YN
Subjt:  LTVLKIVFWFVDDWEVFVLPSLRILEIECDPYAYNYRKDYN

A0A6J1CKA9 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like4.8e-3362.5Show/hide
Query:  VPTLNLDFLSYPFTETSSENYFDLKQTSFKNFIFKILSQHCGREIKRLSY-SSENADEEILVELLTCYARCHSVQELFIDTYSYSTYNWKHCLSAYSSLT
        +PTLN +F SYPF E S  N    KQ+SFKNFIF+ILS+ C  +I++LSY SS N DE +LVELL C+AR H+V+EL++DTY  S Y+WK+CLSA SSLT
Subjt:  VPTLNLDFLSYPFTETSSENYFDLKQTSFKNFIFKILSQHCGREIKRLSY-SSENADEEILVELLTCYARCHSVQELFIDTYSYSTYNWKHCLSAYSSLT

Query:  VLKIVFWFVDDWEVFVLPSLRILEIECD
        VLK+V  FV DW V  LPSLRILEIE +
Subjt:  VLKIVFWFVDDWEVFVLPSLRILEIECD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGCATCGCGACTTTGTCCTCTGCCGCCTCAAGTAATAAAGGAAAATATCGACAGCGTCGCAACGCTGTCGCCTTTACCGCCTATTCTAATCAAGTTAGATTTCC
TGTCCCAACACTCAACTTAGATTTCCTGTCCTACCCATTTACAGAGACGTCAAGTGAAAATTATTTTGACTTGAAACAAACTTCATTTAAGAATTTCATCTTCAAGATTT
TATCTCAACACTGCGGCAGAGAAATTAAACGACTGAGCTACTCTTCCGAAAATGCAGATGAAGAGATTCTGGTAGAATTATTGACATGCTATGCACGATGTCACAGTGTT
CAAGAACTTTTCATTGATACCTATTCTTATAGTACTTATAACTGGAAACACTGTTTATCGGCATATTCATCGCTCACTGTGCTAAAGATAGTATTTTGGTTTGTGGATGA
TTGGGAAGTTTTCGTTTTACCATCCTTGAGAATTTTGGAGATTGAATGTGATCCGTATGCATACAATTATCGCAAAGATTATAATGTGGGTACTGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACAGCATCGCGACTTTGTCCTCTGCCGCCTCAAGTAATAAAGGAAAATATCGACAGCGTCGCAACGCTGTCGCCTTTACCGCCTATTCTAATCAAGTTAGATTTCC
TGTCCCAACACTCAACTTAGATTTCCTGTCCTACCCATTTACAGAGACGTCAAGTGAAAATTATTTTGACTTGAAACAAACTTCATTTAAGAATTTCATCTTCAAGATTT
TATCTCAACACTGCGGCAGAGAAATTAAACGACTGAGCTACTCTTCCGAAAATGCAGATGAAGAGATTCTGGTAGAATTATTGACATGCTATGCACGATGTCACAGTGTT
CAAGAACTTTTCATTGATACCTATTCTTATAGTACTTATAACTGGAAACACTGTTTATCGGCATATTCATCGCTCACTGTGCTAAAGATAGTATTTTGGTTTGTGGATGA
TTGGGAAGTTTTCGTTTTACCATCCTTGAGAATTTTGGAGATTGAATGTGATCCGTATGCATACAATTATCGCAAAGATTATAATGTGGGTACTGGGTAG
Protein sequenceShow/hide protein sequence
MDSIATLSSAASSNKGKYRQRRNAVAFTAYSNQVRFPVPTLNLDFLSYPFTETSSENYFDLKQTSFKNFIFKILSQHCGREIKRLSYSSENADEEILVELLTCYARCHSV
QELFIDTYSYSTYNWKHCLSAYSSLTVLKIVFWFVDDWEVFVLPSLRILEIECDPYAYNYRKDYNVGTG