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Spg021144 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021144
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionVacuolar protein sorting 55 (VPS55) family protein
Genome locationscaffold6:45989903..45993099
RNA-Seq ExpressionSpg021144
SyntenySpg021144
Gene Ontology termsGO:0032511 - late endosome to vacuole transport via multivesicular body sorting pathway (biological process)
GO:0005768 - endosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007262 - Vps55/LEPROT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015678.1 Vacuolar protein sorting-associated protein 55-like protein [Cucurbita argyrosperma subsp. argyrosperma]8.5e-3863.58Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDRKHCHPHHSEACRDHRLGGSGNGPLI
        MADLPGSLQACLSMGKVAFLAILVSGGIV+QIL                                  L    +DRKHCHPHHSEAC DHRLGG+GNGPL+
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDRKHCHPHHSEACRDHRLGGSGNGPLI

Query:  VCSIRDRYFVFLMDERRRRLHHVLRYCIS--MEVKLCYLHQVRLMALFILV
        V SIRD +FVF  DERRRRLHHVLRYCIS  M++KLCYLH VRL+ LFILV
Subjt:  VCSIRDRYFVFLMDERRRRLHHVLRYCIS--MEVKLCYLHQVRLMALFILV

XP_022155500.1 vacuolar protein sorting-associated protein 55 homolog [Momordica charantia]1.7e-3097.3Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND
        MADLPGSLQAC SMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF GSDSSSLYTESND
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND

XP_022923424.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita moschata]3.8e-3095.95Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND
        MADLPGSLQACLSMGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYT+S+D
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND

XP_022965211.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita maxima]5.0e-3095.95Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND
        MADLPGSLQACLSMGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYT+S D
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND

XP_038906097.1 vacuolar protein sorting-associated protein 55 homolog [Benincasa hispida]1.7e-3097.3Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND
        MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYT+SN+
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND

TrEMBL top hitse value%identityAlignment
A0A0A0L5B3 Uncharacterized protein3.1e-3095.95Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND
        MADLP SLQACL MGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYT+SND
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND

A0A1S3BJT4 vacuolar protein sorting-associated protein 55 homolog5.4e-3095.95Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND
        MADLP SLQACL MGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYT+SND
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND

A0A6J1DML0 vacuolar protein sorting-associated protein 55 homolog8.3e-3197.3Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND
        MADLPGSLQAC SMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF GSDSSSLYTESND
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND

A0A6J1E6D1 vacuolar protein sorting-associated protein 55 homolog1.8e-3095.95Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND
        MADLPGSLQACLSMGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYT+S+D
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND

A0A6J1HL31 vacuolar protein sorting-associated protein 55 homolog2.4e-3095.95Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND
        MADLPGSLQACLSMGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYT+S D
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND

SwissProt top hitse value%identityAlignment
Q9AST6 Vacuolar protein sorting-associated protein 55 homolog5.4e-2779.73Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND
        MAD+PG L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+ ES++
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND

Arabidopsis top hitse value%identityAlignment
AT1G32410.1 Vacuolar protein sorting 55 (VPS55) family protein3.8e-2879.73Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND
        MAD+PG L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+ ES++
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND

AT1G32410.2 Vacuolar protein sorting 55 (VPS55) family protein3.8e-2879.73Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND
        MAD+PG L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+ ES++
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND

AT1G32410.3 Vacuolar protein sorting 55 (VPS55) family protein3.8e-2879.73Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND
        MAD+PG L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+ ES++
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND

AT1G32410.4 Vacuolar protein sorting 55 (VPS55) family protein3.8e-2879.73Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND
        MAD+PG L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+ ES++
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND

AT1G32410.5 Vacuolar protein sorting 55 (VPS55) family protein3.8e-2879.73Show/hide
Query:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND
        MAD+PG L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF GSDS+SL+ ES++
Subjt:  MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACTTACCAGGTTCTTTGCAAGCTTGCTTGAGTATGGGGAAGGTGGCATTCTTAGCAATTTTGGTTTCAGGAGGAATTGTAATGCAGATATTGGCATGTGCCTT
GTACAATAATTGGTGGCCAATGCTAAGTGTGATAATGTATGTGCTTCTCCCCATGCCTTTATTGTTCTTTGCGGGGTCAGATAGTTCTTCACTGTATACTGAATCTAATG
ATAGGAAGCATTGCCATCCCCATCATTCTGAAGCATGCCGGGATCATCGGCTGGGGGGCTCTGGCAATGGACCTCTCATCGTTTGTAGTATTCGTGATCGCTATTTTGTG
TTTCTTATGGATGAACGAAGACGACGACTACACCATGTTTTGAGATACTGCATCTCCATGGAAGTGAAGCTGTGCTATCTCCATCAGGTGAGGCTTATGGCTTTGTTCAT
TCTTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACTTACCAGGTTCTTTGCAAGCTTGCTTGAGTATGGGGAAGGTGGCATTCTTAGCAATTTTGGTTTCAGGAGGAATTGTAATGCAGATATTGGCATGTGCCTT
GTACAATAATTGGTGGCCAATGCTAAGTGTGATAATGTATGTGCTTCTCCCCATGCCTTTATTGTTCTTTGCGGGGTCAGATAGTTCTTCACTGTATACTGAATCTAATG
ATAGGAAGCATTGCCATCCCCATCATTCTGAAGCATGCCGGGATCATCGGCTGGGGGGCTCTGGCAATGGACCTCTCATCGTTTGTAGTATTCGTGATCGCTATTTTGTG
TTTCTTATGGATGAACGAAGACGACGACTACACCATGTTTTGAGATACTGCATCTCCATGGAAGTGAAGCTGTGCTATCTCCATCAGGTGAGGCTTATGGCTTTGTTCAT
TCTTGTCTGA
Protein sequenceShow/hide protein sequence
MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGSDSSSLYTESNDRKHCHPHHSEACRDHRLGGSGNGPLIVCSIRDRYFV
FLMDERRRRLHHVLRYCISMEVKLCYLHQVRLMALFILV