CuGenDBv2

Gene ID	Spg021166
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	light-harvesting complex-like protein 3 isotype 1, chloroplastic
Genome location	scaffold6:45469837..45471382
RNA-Seq Expression	Spg021166
Synteny	Spg021166
Gene Ontology terms	GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0041046.1 uncharacterized protein E6C27_scaffold477G00170 [Cucumis melo var. makuwa]

1.8e-118

84.89

Show/hide

Query:  SSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNP---LSSSLFSTRAAADNGAGL---SAAVAVEAPVEQKDPEPAKPAPEEQESLAGANGSVAAA
        SSMALFSP SHLSTLSPSSHH   FSFRPFSSLRTRNP    SSSLF+ RA ADNGAG+   SA VAVE PVEQKDPEPA      +ESLAG NGSVAAA
Subjt:  SSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNP---LSSSLFSTRAAADNGAGL---SAAVAVEAPVEQKDPEPAKPAPEEQESLAGANGSVAAA

Query:  EE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAA
        EE VEVVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSI+PWWAWIKRYHLPEAELLN           GRAA
Subjt:  EE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAA

Query:  MVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDET-SGSGK
        MVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNED+ETLKKLIDETTFYDKQWQATWQDET SGSGK
Subjt:  MVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDET-SGSGK

XP_004147237.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucumis sativus]

7.8e-122

86.59

Show/hide

Query:  SSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNP--LSSSLFSTRAAADNGAGL---SAAVAVEAPVEQKDPEPAKPAPEEQESLAGANGSVAAAE
        SSMALFSP SHLST SP SHH   FSFRPFSSLRTRNP   SSSLF+ RA ADNGAG+   SA V+VE PVEQKDPEPAK APEEQESLAG NGSVAAAE
Subjt:  SSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNP--LSSSLFSTRAAADNGAGL---SAAVAVEAPVEQKDPEPAKPAPEEQESLAGANGSVAAAE

Query:  E-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAAM
        E VEVVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSI+PWWAWIKRYHLPEAELLN           GRAAM
Subjt:  E-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAAM

Query:  VGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDETSGSGK
        VGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNED+ETLKKLIDETTFYDKQWQATWQDETSGSGK
Subjt:  VGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDETSGSGK

XP_008448777.1 PREDICTED: uncharacterized protein LOC103490842 [Cucumis melo]

1.8e-118

84.89

Show/hide

Query:  SSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNP---LSSSLFSTRAAADNGAGL---SAAVAVEAPVEQKDPEPAKPAPEEQESLAGANGSVAAA
        SSMALFSP SHLSTLSPSSHH   FSFRPFSSLRTRNP    SSSLF+ RA ADNGAG+   SA VAVE PVEQKDPEPA      +ESLAG NGSVAAA
Subjt:  SSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNP---LSSSLFSTRAAADNGAGL---SAAVAVEAPVEQKDPEPAKPAPEEQESLAGANGSVAAA

Query:  EE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAA
        EE VEVVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSI+PWWAWIKRYHLPEAELLN           GRAA
Subjt:  EE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAA

Query:  MVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDET-SGSGK
        MVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNED+ETLKKLIDETTFYDKQWQATWQDET SGSGK
Subjt:  MVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDET-SGSGK

XP_022155552.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Momordica charantia]

1.6e-114

83.96

Show/hide

Query:  SSSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNPLSSSLFSTRAAADNGAGLSAAVAVEAPVEQKDPEPAKPAPEEQESL-AGANGSVAAAEEVE
        SSSMALFSPPSH STLSPSS HR  FSF  F SLRTRNP  +++   RAAADNGAG+SAAVAVE  V+ KDPE     PEEQESL AGANGSVAAAEEVE
Subjt:  SSSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNPLSSSLFSTRAAADNGAGLSAAVAVEAPVEQKDPEPAKPAPEEQESL-AGANGSVAAAEEVE

Query:  VVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAAMVGFF
        VVSKFEDPKWVNGTWDL QFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVF++SIIPWWAWIKRYHLPEAELLN           GRAAMVGFF
Subjt:  VVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAAMVGFF

Query:  MAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDETS
        MAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNED+ET+K+LIDETTFYDKQWQATWQDETS
Subjt:  MAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDETS

XP_038906355.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Benincasa hispida]

1.4e-126

87.91

Show/hide

Query:  SSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNPLSSSLFSTRAAADNGAGL---SAAVAVEAPVEQKDPEPAKPAPEEQESLAGANGSVAAAEEV
        SSMALFSP SHLSTLSPSSHHR  FSFRPFSSLRTRNP SSSLF+ RA ADNGAG+   SAAVAVE PVEQKDPEPAK   EEQESLAG NGSVAAAEEV
Subjt:  SSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNPLSSSLFSTRAAADNGAGL---SAAVAVEAPVEQKDPEPAKPAPEEQESLAGANGSVAAAEEV

Query:  EVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAAMVGF
        EVVSKFEDPKW+NGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSI+PWWAWIKRYHLPEAELLN           GRAAMVGF
Subjt:  EVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAAMVGF

Query:  FMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDETSGSGK
        FMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNED+ETLKKLIDETTFYDKQWQATWQDE SGSGK
Subjt:  FMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDETSGSGK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5D8 Uncharacterized protein

3.8e-122

86.59

Show/hide

Query:  SSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNP--LSSSLFSTRAAADNGAGL---SAAVAVEAPVEQKDPEPAKPAPEEQESLAGANGSVAAAE
        SSMALFSP SHLST SP SHH   FSFRPFSSLRTRNP   SSSLF+ RA ADNGAG+   SA V+VE PVEQKDPEPAK APEEQESLAG NGSVAAAE
Subjt:  SSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNP--LSSSLFSTRAAADNGAGL---SAAVAVEAPVEQKDPEPAKPAPEEQESLAGANGSVAAAE

Query:  E-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAAM
        E VEVVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSI+PWWAWIKRYHLPEAELLN           GRAAM
Subjt:  E-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAAM

Query:  VGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDETSGSGK
        VGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNED+ETLKKLIDETTFYDKQWQATWQDETSGSGK
Subjt:  VGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDETSGSGK

A0A1S3BLD8 uncharacterized protein LOC103490842

8.7e-119

84.89

Show/hide

Query:  SSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNP---LSSSLFSTRAAADNGAGL---SAAVAVEAPVEQKDPEPAKPAPEEQESLAGANGSVAAA
        SSMALFSP SHLSTLSPSSHH   FSFRPFSSLRTRNP    SSSLF+ RA ADNGAG+   SA VAVE PVEQKDPEPA      +ESLAG NGSVAAA
Subjt:  SSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNP---LSSSLFSTRAAADNGAGL---SAAVAVEAPVEQKDPEPAKPAPEEQESLAGANGSVAAA

Query:  EE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAA
        EE VEVVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSI+PWWAWIKRYHLPEAELLN           GRAA
Subjt:  EE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAA

Query:  MVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDET-SGSGK
        MVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNED+ETLKKLIDETTFYDKQWQATWQDET SGSGK
Subjt:  MVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDET-SGSGK

A0A5A7TG76 Uncharacterized protein

8.7e-119

84.89

Show/hide

Query:  SSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNP---LSSSLFSTRAAADNGAGL---SAAVAVEAPVEQKDPEPAKPAPEEQESLAGANGSVAAA
        SSMALFSP SHLSTLSPSSHH   FSFRPFSSLRTRNP    SSSLF+ RA ADNGAG+   SA VAVE PVEQKDPEPA      +ESLAG NGSVAAA
Subjt:  SSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNP---LSSSLFSTRAAADNGAGL---SAAVAVEAPVEQKDPEPAKPAPEEQESLAGANGSVAAA

Query:  EE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAA
        EE VEVVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSI+PWWAWIKRYHLPEAELLN           GRAA
Subjt:  EE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAA

Query:  MVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDET-SGSGK
        MVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNED+ETLKKLIDETTFYDKQWQATWQDET SGSGK
Subjt:  MVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDET-SGSGK

A0A6J1DPN2 light-harvesting complex-like protein 3 isotype 1, chloroplastic

7.7e-115

83.96

Show/hide

Query:  SSSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNPLSSSLFSTRAAADNGAGLSAAVAVEAPVEQKDPEPAKPAPEEQESL-AGANGSVAAAEEVE
        SSSMALFSPPSH STLSPSS HR  FSF  F SLRTRNP  +++   RAAADNGAG+SAAVAVE  V+ KDPE     PEEQESL AGANGSVAAAEEVE
Subjt:  SSSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNPLSSSLFSTRAAADNGAGLSAAVAVEAPVEQKDPEPAKPAPEEQESL-AGANGSVAAAEEVE

Query:  VVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAAMVGFF
        VVSKFEDPKWVNGTWDL QFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVF++SIIPWWAWIKRYHLPEAELLN           GRAAMVGFF
Subjt:  VVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAAMVGFF

Query:  MAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDETS
        MAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNED+ET+K+LIDETTFYDKQWQATWQDETS
Subjt:  MAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDETS

A0A6J1HQ78 light-harvesting complex-like protein 3 isotype 1, chloroplastic

4.2e-113

81.92

Show/hide

Query:  SSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNPLSSSLFSTRAAADNGAGLS-AAVAVEAPVEQKDPEPAKPAPEEQESLAGANGSVAAAEEVEV
        SSMALFSPPS LS+LSPSSHHR  F  RPFSSLR+RNP      S+  AADNGAG+S  +VAVE  V QKDPE   PA E++ESLA  NGSVAA EEV V
Subjt:  SSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNPLSSSLFSTRAAADNGAGLS-AAVAVEAPVEQKDPEPAKPAPEEQESLAGANGSVAAAEEVEV

Query:  VSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAAMVGFFM
        VSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSI+PWWAWIKRYHLPEAE+LN           GRAAMVGFFM
Subjt:  VSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAAMVGFFM

Query:  AYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDETSGSGK
        AYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNED+ETLKKLIDETTFYDKQWQATWQDET GSGK
Subjt:  AYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDETSGSGK

SwissProt top hits

e value

%identity

Alignment

Q6NKS4 Light-harvesting complex-like protein 3 isotype 2, chloroplastic

1.6e-72

57.25

Show/hide

Query:  MSSSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNPLSSSLFS----TRAAADNGAGLSAAVAVEAPVEQKDPEPAKPAPEEQESLA--GANGSVA
        MS SMALFSPP   S  +P+   + S S            LS+  FS     RA++DNG   S  V +  P      E    +P E  S +  GA G  A
Subjt:  MSSSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNPLSSSLFS----TRAAADNGAGLSAAVAVEAPVEQKDPEPAKPAPEEQESLA--GANGSVA

Query:  AAEEVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRA
             E V K+++ KWVNGTWDL QF KDG TDWD+VI +EA+RRKWLE+NPE++SN++ VVFDTSIIPWWAW+KRYHLPEAELLN           GRA
Subjt:  AAEEVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRA

Query:  AMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDETSGS
        AM+GFFMAYFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNEDL+ LK L DETT YDKQWQA W++  S +
Subjt:  AMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDETSGS

Q9SYX1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic

4.7e-77

59.86

Show/hide

Query:  MALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNPLSSSLFSTRAAADNGA-GLSAAVAVEAP----VEQKDPEPAKPAPEEQESLAGANGSVAAAE--
        MALFSPP   S+L  + +    FSF   SS R      S L  TRA++D+G+   +AAV+VEAP    V  K+P  + PA +++E+    N +V   E  
Subjt:  MALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNPLSSSLFSTRAAADNGA-GLSAAVAVEAP----VEQKDPEPAKPAPEEQESLAGANGSVAAAE--

Query:  EVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAAMV
          E V KF+D +W+NGTWDL QF KDG TDWD+VI AEA+RRKWLE NPE++SN++PV+FDTSIIPWWAWIKRYHLPEAELLN           GRAAM+
Subjt:  EVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAAMV

Query:  GFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQ---DETSGSGKE
        GFFMAYFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W+   DE+ GS K+
Subjt:  GFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQ---DETSGSGKE

Arabidopsis top hits

e value

%identity

Alignment

AT4G17600.1 Chlorophyll A-B binding family protein

3.3e-78

59.86

Show/hide

Query:  MALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNPLSSSLFSTRAAADNGA-GLSAAVAVEAP----VEQKDPEPAKPAPEEQESLAGANGSVAAAE--
        MALFSPP   S+L  + +    FSF   SS R      S L  TRA++D+G+   +AAV+VEAP    V  K+P  + PA +++E+    N +V   E  
Subjt:  MALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNPLSSSLFSTRAAADNGA-GLSAAVAVEAP----VEQKDPEPAKPAPEEQESLAGANGSVAAAE--

Query:  EVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAAMV
          E V KF+D +W+NGTWDL QF KDG TDWD+VI AEA+RRKWLE NPE++SN++PV+FDTSIIPWWAWIKRYHLPEAELLN           GRAAM+
Subjt:  EVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAAMV

Query:  GFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQ---DETSGSGKE
        GFFMAYFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W+   DE+ GS K+
Subjt:  GFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQ---DETSGSGKE

AT5G47110.1 Chlorophyll A-B binding family protein

1.1e-73

57.25

Show/hide

Query:  MSSSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNPLSSSLFS----TRAAADNGAGLSAAVAVEAPVEQKDPEPAKPAPEEQESLA--GANGSVA
        MS SMALFSPP   S  +P+   + S S            LS+  FS     RA++DNG   S  V +  P      E    +P E  S +  GA G  A
Subjt:  MSSSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNPLSSSLFS----TRAAADNGAGLSAAVAVEAPVEQKDPEPAKPAPEEQESLA--GANGSVA

Query:  AAEEVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRA
             E V K+++ KWVNGTWDL QF KDG TDWD+VI +EA+RRKWLE+NPE++SN++ VVFDTSIIPWWAW+KRYHLPEAELLN           GRA
Subjt:  AAEEVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRA

Query:  AMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDETSGS
        AM+GFFMAYFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNEDL+ LK L DETT YDKQWQA W++  S +
Subjt:  AMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDETSGS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACAATGTCTTCTTCAATGGCTTTGTTTTCTCCTCCTTCCCATCTCTCTACTCTCTCTCCTTCTTCCCACCATAGAAATTCCTTCTCCTTCAGACCCTTTTCCTCTCT
CAGAACCAGAAACCCTTTATCTTCCTCTCTCTTCTCCACCAGGGCCGCTGCTGACAATGGCGCCGGACTTTCAGCCGCCGTTGCTGTAGAAGCCCCCGTCGAGCAGAAGG
ATCCGGAGCCGGCCAAGCCTGCTCCGGAAGAGCAGGAGAGCCTCGCCGGAGCCAATGGCTCGGTGGCGGCCGCCGAAGAAGTCGAGGTGGTTAGCAAATTCGAAGACCCT
AAATGGGTTAACGGGACTTGGGATTTGAATCAGTTCCGGAAAGATGGAAGTACCGATTGGGATGCTGTAATTGACGCTGAGGCTAGAAGGAGGAAATGGCTGGAAAACAA
TCCAGAATCATCAAGTAATGAGGATCCTGTGGTATTTGACACATCCATAATTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTCCCTGAGGCTGAGCTGCTTAATGGTA
TAAACATCCGTGCGATGGTTTTCGACGCAGGCCGTGCAGCCATGGTGGGGTTCTTCATGGCTTACTTTGTTGATAGCTTGACTGGTGTAGGACTAGTAGGTCAAATGGGC
AACTTCTTCTGCAAAACTTTGTTGTTTGTAGCTGTGGTGGGAGTTCTTTTGATCAGAAAGAATGAAGATTTAGAGACTCTAAAGAAGTTGATTGATGAGACAACATTTTA
TGACAAGCAATGGCAAGCAACTTGGCAGGATGAAACCTCAGGCTCAGGCAAAGAGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MTMSSSMALFSPPSHLSTLSPSSHHRNSFSFRPFSSLRTRNPLSSSLFSTRAAADNGAGLSAAVAVEAPVEQKDPEPAKPAPEEQESLAGANGSVAAAEEVEVVSKFEDP
KWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGINIRAMVFDAGRAAMVGFFMAYFVDSLTGVGLVGQMG
NFFCKTLLFVAVVGVLLIRKNEDLETLKKLIDETTFYDKQWQATWQDETSGSGKE

Spg021166 (gene) of Sponge gourd (cylindrica) v1 genome