CuGenDBv2

Gene ID	Spg021184
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	binding partner of ACD11 1-like
Genome location	scaffold6:47017868..47021073
RNA-Seq Expression	Spg021184
Synteny	Spg021184
Gene Ontology terms	GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR000504 - RNA recognition motif domain IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily IPR035979 - RNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0053025.1 binding partner of ACD11 1 isoform X2 [Cucumis melo var. makuwa]

8.6e-136

94.72

Show/hide

Query:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA
        M +KTVKVSNVSLGASERD+KEFFSFSGDIEYLEMQSE+ERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPA G K PGAA
Subjt:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL
        IMKNRYVMSGTSWVAD FNKVAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL

XP_008448657.1 PREDICTED: binding partner of ACD11 1 isoform X1 [Cucumis melo]

2.9e-136

95.07

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Query:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA
        MS+KTVKVSNVSLGASERD+KEFFSFSGDIEYLEMQSE+ERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPA G K PGAA
Subjt:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL
        IMKNRYVMSGTSWVAD FNKVAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL

XP_008448658.1 PREDICTED: binding partner of ACD11 1 isoform X2 [Cucumis melo]

8.6e-136

94.72

Show/hide

Query:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA
        M +KTVKVSNVSLGASERD+KEFFSFSGDIEYLEMQSE+ERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPA G K PGAA
Subjt:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL
        IMKNRYVMSGTSWVAD FNKVAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL

XP_038906357.1 binding partner of ACD11 1-like isoform X1 [Benincasa hispida]

1.7e-136

95.77

Show/hide

Query:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA
        MS+KTVKVSNVSLGASERD+KEFFSFSGDIEYLEMQSESERSQ AYVTFKD QGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPA G KAPGAA
Subjt:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL
        IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL

XP_038906358.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]

5.0e-136

95.42

Show/hide

Query:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA
        M +KTVKVSNVSLGASERD+KEFFSFSGDIEYLEMQSESERSQ AYVTFKD QGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPA G KAPGAA
Subjt:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL
        IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L545 RRM domain-containing protein

2.7e-135

94.01

Show/hide

Query:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA
        MS+KTV+VSNVSLGASERD+KEFFSFSGDIEYLEMQSE+ERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPA G K PGAA
Subjt:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVAT DKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL
        IMKNRYVMSGTSWVAD FN+VAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL

A0A1S3BK74 binding partner of ACD11 1 isoform X2

4.1e-136

94.72

Show/hide

Query:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA
        M +KTVKVSNVSLGASERD+KEFFSFSGDIEYLEMQSE+ERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPA G K PGAA
Subjt:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL
        IMKNRYVMSGTSWVAD FNKVAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL

A0A1S3BK81 binding partner of ACD11 1 isoform X1

1.4e-136

95.07

Show/hide

Query:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA
        MS+KTVKVSNVSLGASERD+KEFFSFSGDIEYLEMQSE+ERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPA G K PGAA
Subjt:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL
        IMKNRYVMSGTSWVAD FNKVAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL

A0A5A7UH68 Binding partner of ACD11 1 isoform X2

4.1e-136

94.72

Show/hide

Query:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA
        M +KTVKVSNVSLGASERD+KEFFSFSGDIEYLEMQSE+ERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPPPA G K PGAA
Subjt:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL
        IMKNRYVMSGTSWVAD FNKVAKAAGEVGQKTKEKVVV+EEEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQGLIL

A0A6J1CV14 binding partner of ACD11 1-like isoform X1

5.1e-134

93.64

Show/hide

Query:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA
        MS+KTVKVSNVSLGAS+RDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCP+YELPPEATAPP A+G  APGAA
Subjt:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ESAF+KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVAT DKKIGFTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAE KVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRPKPEPAQGLIL
        IM NR+VMSGTSWVADAFNKVAKAAGEVGQKTKEK V SEEEQ+KKTVEDFAQVHLSESPKAA+APPEPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRPKPEPAQGLIL

SwissProt top hits

e value

%identity

Alignment

P87216 Protein vip1

1.2e-04

25.42

Show/hide

Query:  VKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAAESAFR
        V V+N+S   +E+ + +FFSF G +  +  +   E +QTA + F+     +TA+LL  A +    + IT          A +     GA    AA    +
Subjt:  VKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAAESAFR

Query:  KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEK
            ++S +L++G+ L    L  +   D+ + +SS        L+  +     ++     V++K  EVD KF +S+K
Subjt:  KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEK

Q9LFD5 Binding partner of ACD11 1

1.0e-70

57.52

Show/hide

Query:  AMSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGA
        A  V++VKV N+S GA+E D+KEFFSFSG++E +++QS      +AYVTFK+ QGAETAVLLSGA+I D SV I L P Y  P    A   +SG      
Subjt:  AMSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGA

Query:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGT
        AES  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSLV++K++ VDQ FQV+E+TKS +A AE+ VS+AG+
Subjt:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGT

Query:  AIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK
        A+MKNRYV++G SW A AFN+VA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  AIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK

Arabidopsis top hits

e value

%identity

Alignment

AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein

7.8e-95

69.45

Show/hide

Query:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAP-PPASGAKAPGA
        M++ TVKVSNVSLGA++RD+KEFFSFSGDI YLE QSE+ER++ AYVTFKD QGAETAVLLSGATIVD SV +++ P+Y+L PEA A   P    K+P A
Subjt:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAP-PPASGAKAPGA

Query:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGT
         +S  RKAEDVVS MLAKGFILGKDA+  AK+ DEKHQL+STASAKVA+ DKKIGFT+KI+ GT +V +KVREVDQK+QVSEKTKSA A AE+ VSNAG+
Subjt:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGT

Query:  AIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRPK
        AIMKNRYV++G +WV  AFNKVAKAA EVGQK KEKV ++EEE ++K V++FA+VHLSESPKAAS+  E ++  K
Subjt:  AIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRPK

AT5G16840.1 binding partner of acd11 1

7.1e-72

57.52

Show/hide

Query:  AMSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGA
        A  V++VKV N+S GA+E D+KEFFSFSG++E +++QS      +AYVTFK+ QGAETAVLLSGA+I D SV I L P Y  P    A   +SG      
Subjt:  AMSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGA

Query:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGT
        AES  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSLV++K++ VDQ FQV+E+TKS +A AE+ VS+AG+
Subjt:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGT

Query:  AIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK
        A+MKNRYV++G SW A AFN+VA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  AIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK

AT5G16840.2 binding partner of acd11 1

6.4e-73

58.27

Show/hide

Query:  AMSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGA
        A  V++VKV N+S GA+E D+KEFFSFSG++E +++QS +E S  AYVTFK+ QGAETAVLLSGA+I D SV I L P Y  P    A   +SG      
Subjt:  AMSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGA

Query:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGT
        AES  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSLV++K++ VDQ FQV+E+TKS +A AE+ VS+AG+
Subjt:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGT

Query:  AIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK
        A+MKNRYV++G SW A AFN+VA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  AIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK

AT5G16840.3 binding partner of acd11 1

3.2e-72

57.74

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Query:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA
        M+V++VKV N+S GA+E D+KEFFSFSG++E +++QS      +AYVTFK+ QGAETAVLLSGA+I D SV I L P Y  P    A   +SG      A
Subjt:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPASGAKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA
        ES  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSLV++K++ VDQ FQV+E+TKS +A AE+ VS+AG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTA

Query:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK
        +MKNRYV++G SW A AFN+VA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  IMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQ----RKKTVEDFAQVHLSESPK

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein

1.7e-86

62.98

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Query:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAP----PPASGAKA
        MS+ TVKVSNVSL A+ERD+KEFFSFSGDI YLE QSE++ S+ AYVTFKD QGAETAVLL+G+TIVD SV +T+ P+Y+LPP+A A       ++ + +
Subjt:  MSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAP----PPASGAKA

Query:  PGAAE-SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVS
        P   + S FRKAEDVVSGM++KGF+LGKDA+  AK+ DEKHQL+STASA+V + DK+IGFTEKI+ GT++VS+KV+EVDQKFQV+EKTKSA A AE+ VS
Subjt:  PGAAE-SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVS

Query:  NAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVS--EEEQRKKTVEDFAQVHLSESPKAA------SAPPEPQQRPKPE
        NAG+AIMKNRYV++G +WV  AFN+V+KAA EVGQK KEKV ++  EEE++KK V++ A VHL+ESPKA       S  PE + +P  E
Subjt:  NAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVS--EEEQRKKTVEDFAQVHLSESPKAA------SAPPEPQQRPKPE

Sequences

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CDS sequence

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ATGGAAATTCCCCCCGTCCCGTTAACGTTCCGTTTCGAATCCAAGACGGTTTCAGTTTTCTGGAGATCGTCGGTTGATTCCGTCTCCGTTCCGGCGATTTTATCTTCGTC
ATTTCCAGCGATGTCGGTTAAAACTGTTAAAGTCAGCAATGTCTCCTTGGGAGCGTCTGAACGAGATGTCAAGGAGTTTTTTTCCTTTTCTGGTGACATTGAATATCTGG
AAATGCAAAGTGAAAGTGAACGGTCTCAAACTGCTTATGTAACCTTTAAGGATGCACAAGGAGCAGAGACTGCTGTTCTTCTGTCCGGAGCAACTATAGTGGATCTGTCT
GTCAACATCACTCTGTGTCCTGAGTATGAGCTCCCTCCAGAAGCTACTGCACCACCCCCTGCCTCAGGAGCTAAAGCACCTGGTGCTGCTGAATCTGCCTTCCGGAAAGC
AGAAGATGTGGTTAGCGGCATGCTTGCCAAGGGCTTTATCTTGGGTAAAGATGCACTCAACTCTGCAAAGGCATTTGATGAGAAACACCAGTTATCTTCCACGGCCTCAG
CCAAAGTTGCTACATTGGATAAAAAAATTGGGTTCACCGAGAAAATTAGTGCTGGTACATCGTTGGTGAGCGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTTCG
GAGAAGACTAAATCAGCATTTGCAGTTGCAGAGGAAAAAGTTAGCAATGCCGGAACTGCCATCATGAAAAACCGATATGTAATGAGCGGAACTAGCTGGGTTGCTGATGC
TTTCAATAAGGTAGCTAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAGTCGTGGTGTCCGAAGAAGAACAGAGAAAGAAGACGGTCGAAGATTTTGCTCAGG
TTCATCTCTCGGAATCCCCTAAAGCAGCATCTGCGCCCCCTGAGCCTCAACAACGTCCCAAGCCCGAACCGGCTCAAGGTCTGATTCTCTGA

mRNA sequence

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Protein sequence

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MEIPPVPLTFRFESKTVSVFWRSSVDSVSVPAILSSSFPAMSVKTVKVSNVSLGASERDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLS
VNITLCPEYELPPEATAPPPASGAKAPGAAESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS
EKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRPKPEPAQGLIL

Spg021184 (gene) of Sponge gourd (cylindrica) v1 genome