CuGenDBv2

Gene ID	Spg021222
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Genome location	scaffold6:48319215..48321264
RNA-Seq Expression	Spg021222
Synteny	Spg021222
Gene Ontology terms	GO:0048767 - root hair elongation (biological process) GO:0071816 - tail-anchored membrane protein insertion into ER membrane (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0043529 - GET complex (cellular component) GO:0043621 - protein self-association (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6596276.1 hypothetical protein SDJN03_09456, partial [Cucurbita argyrosperma subsp. sororia]

6.3e-39

91.95

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Query:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV
        QESR+K+IK+SYGLYS+VLLISKVL+YIVLVCWFWRASVATVPHHLVQPFG+FLSWR GGTVNDYVKVGIIPWLILSTRVSKFVCRV
Subjt:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV

XP_004146176.1 uncharacterized protein LOC101204142 [Cucumis sativus]

4.8e-39

93.1

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Query:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV
        QESRNKEIKTSYGLYSQVLL+SKV+++IVLVCWFWRASVATVPHHLVQPFGKFLSWR GGTVNDYVKVGIIPWLILSTRVSKFV RV
Subjt:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV

XP_008448478.1 PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo]

3.3e-40

94.25

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Query:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV
        QESRNKEIKTSYGLYSQVLLISKV++YIVLVCWFWRASVATVPHHLVQPFGKFLSW+ GGTVNDYVKVGIIPWLILSTRVSKFVC+V
Subjt:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV

XP_022945757.1 uncharacterized protein LOC111449636 [Cucurbita moschata]

6.3e-39

91.95

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Query:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV
        QESR+K+IK+SYGLYS+VLLISKVL+YIVLVCWFWRASVATVPHHLVQPFG+FLSWR GGTVNDYVKVGIIPWLILSTRVSKFVCRV
Subjt:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV

XP_023539852.1 uncharacterized protein LOC111800404 [Cucurbita pepo subsp. pepo]

2.2e-39

93.1

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Query:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV
        QESR+KEIK+SYGLYS+VLLISKVL+YIVLVCWFWRASVATVPHHLVQPFG+FLSWR GGTVNDYVKVGIIPWLILSTRVSKFVCRV
Subjt:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4T9 Uncharacterized protein

2.3e-39

93.1

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Query:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV
        QESRNKEIKTSYGLYSQVLL+SKV+++IVLVCWFWRASVATVPHHLVQPFGKFLSWR GGTVNDYVKVGIIPWLILSTRVSKFV RV
Subjt:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV

A0A1S3BKE1 uncharacterized protein LOC103490650

1.6e-40

94.25

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Query:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV
        QESRNKEIKTSYGLYSQVLLISKV++YIVLVCWFWRASVATVPHHLVQPFGKFLSW+ GGTVNDYVKVGIIPWLILSTRVSKFVC+V
Subjt:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV

A0A6J1CUP1 uncharacterized protein LOC111014752

1.9e-36

86.21

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Query:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV
        QESR+KE+KTSYGLYSQVLL SKV++YI LV WFWRASVATVPHHLVQPFGK LSWR GGTVNDYVKVG+IPWLILSTRVSK+VC+V
Subjt:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV

A0A6J1G1T6 uncharacterized protein LOC111449636

3.1e-39

91.95

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Query:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV
        QESR+K+IK+SYGLYS+VLLISKVL+YIVLVCWFWRASVATVPHHLVQPFG+FLSWR GGTVNDYVKVGIIPWLILSTRVSKFVCRV
Subjt:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV

A0A6J1I7A9 uncharacterized protein LOC111470261

2.0e-38

89.66

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Query:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV
        QESR+K++K+SYGLYS+VLLISKVL+YIVLVCWFWRASVATVPHHLVQPFG+FLSWR GG VNDYVKVGIIPWLILSTRVSKFVCRV
Subjt:  QESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRV

SwissProt top hits

e value

%identity

Alignment

Q1H5D2 Protein GET1

8.6e-23

58.82

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Query:  ESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCR
        E  +KEIK SY +Y + LL SKV++Y++LV  FWR  +A +   LVQPFG  LSW TGG +  +V VGIIPWLILS RVSK+VCR
Subjt:  ESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCR

Arabidopsis top hits

e value

%identity

Alignment

AT4G16444.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

6.1e-24

58.82

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Query:  ESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCR
        E  +KEIK SY +Y + LL SKV++Y++LV  FWR  +A +   LVQPFG  LSW TGG +  +V VGIIPWLILS RVSK+VCR
Subjt:  ESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCR

Sequences

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CDS sequence

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ATGACATTGCTGCCAGATCAAGAATCACGAAATAAGGAGATCAAGACGTCATATGGTTTATATAGTCAAGTCCTGCTGATTTCAAAGGTTTTGATGTATATTGTGCTGGT
TTGCTGGTTTTGGAGAGCTTCTGTTGCTACTGTACCTCATCATCTTGTGCAGCCATTTGGAAAATTTTTATCTTGGAGGACTGGAGGTACCGTAAATGATTATGTGAAGG
TTGGAATCATACCTTGGTTGATACTGTCGACAAGGGTTAGCAAATTTGTATGTCGAGTCAAGTAA

mRNA sequence

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Protein sequence

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MTLLPDQESRNKEIKTSYGLYSQVLLISKVLMYIVLVCWFWRASVATVPHHLVQPFGKFLSWRTGGTVNDYVKVGIIPWLILSTRVSKFVCRVK

Spg021222 (gene) of Sponge gourd (cylindrica) v1 genome