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Spg021239 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021239
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold6:45304388..45312421
RNA-Seq ExpressionSpg021239
SyntenySpg021239
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN67932.1 hypothetical protein VITISV_013913 [Vitis vinifera]3.4e-1635.76Show/hide
Query:  CFWGRIKVL-----EFISCSIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRP
        C W  I ++     +F    +GDG I  FWEDLW GD+PL V +PRL  +  +K   ++SI       S +  FRR+L+  E   +  L+  L      P
Subjt:  CFWGRIKVL-----EFISCSIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRP

Query:  KRRDNRSWISNPSEGFSCASFFRSLSSPIPPPGASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD
           D RSW  +PS  F   SFF +LS     P       +W  ++P KVK F   V H +VNT D
Subjt:  KRRDNRSWISNPSEGFSCASFFRSLSSPIPPPGASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD

CAN68165.1 hypothetical protein VITISV_008538 [Vitis vinifera]2.6e-1638.41Show/hide
Query:  EFISCSIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWISNPSE
        +F    +GDG    FWEDLW GD+ L V FPRL ++  +K   ++SI  S    S +  FRR+L+  E  KV SL+  L      P   D RSW  + S 
Subjt:  EFISCSIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWISNPSE

Query:  GFSCASFFRSLSSPIPPPGASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD
         F+  SFF +LS     P       +W  ++P K+KFF   V H +VNT D
Subjt:  GFSCASFFRSLSSPIPPPGASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD

RVW36758.1 hypothetical protein CK203_101571 [Vitis vinifera]2.6e-1636.36Show/hide
Query:  KVLEFISCSIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWISN
        +V +  S  +GDG    FW+DLW GD+PL + +PRL  +  +K   ++SI        L   FRR+LT  E   + SL+  L      P   D RSW  +
Subjt:  KVLEFISCSIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWISN

Query:  PSEGFSCASFFRSLSSPIPPPGASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD
        PS  F+  SFF +LS     P       +W  ++P KVK F   V H +VNT D
Subjt:  PSEGFSCASFFRSLSSPIPPPGASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD

VVA30963.1 Hypothetical predicted protein, partial [Prunus dulcis]3.4e-1637.58Show/hide
Query:  FISC---SIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFS-SLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWISN
        F+ C   S+G+G    FWEDLW+ +  L  +FPRL  LS  K  S+A    + +   +    FRR+L+  E  +VV LL +L +      R D RSW   
Subjt:  FISC---SIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFS-SLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWISN

Query:  PSEGFSC---ASFFRSLSSPIPPPGASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD
            FSC    SF  S +  + PP    FSS+WK K P K++FF     +GR+NT D
Subjt:  PSEGFSC---ASFFRSLSSPIPPPGASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]2.5e-2748.7Show/hide
Query:  SIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFP-SFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWISNPSEGFSC
        S+GDG   YFWED W+G+KPLS+ FPR+Y LSE KL SVA +     + SS+SLG  RSLT  E+ ++ +LL LL   S    R D R WI NP  GFSC
Subjt:  SIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFP-SFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWISNPSEGFSC

Query:  ASFFRSLSSP-------------IPPPGASIFSSLWKVKIPKKVKFFACEVLHG
        +SFF+ L SP              P      F+SLWK+KIPKK+KFF  + L G
Subjt:  ASFFRSLSSP-------------IPPPGASIFSSLWKVKIPKKVKFFACEVLHG

TrEMBL top hitse value%identityAlignment
A0A438DMT0 zf-RVT domain-containing protein1.3e-1636.36Show/hide
Query:  KVLEFISCSIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWISN
        +V +  S  +GDG    FW+DLW GD+PL + +PRL  +  +K   ++SI        L   FRR+LT  E   + SL+  L      P   D RSW  +
Subjt:  KVLEFISCSIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWISN

Query:  PSEGFSCASFFRSLSSPIPPPGASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD
        PS  F+  SFF +LS     P       +W  ++P KVK F   V H +VNT D
Subjt:  PSEGFSCASFFRSLSSPIPPPGASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD

A0A5E4FU33 zf-RVT domain-containing protein (Fragment)1.6e-1637.58Show/hide
Query:  FISC---SIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFS-SLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWISN
        F+ C   S+G+G    FWEDLW+ +  L  +FPRL  LS  K  S+A    + +   +    FRR+L+  E  +VV LL +L +      R D RSW   
Subjt:  FISC---SIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFS-SLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWISN

Query:  PSEGFSC---ASFFRSLSSPIPPPGASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD
            FSC    SF  S +  + PP    FSS+WK K P K++FF     +GR+NT D
Subjt:  PSEGFSC---ASFFRSLSSPIPPPGASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD

A0A6J1DFI2 uncharacterized protein LOC1110196241.2e-2748.7Show/hide
Query:  SIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFP-SFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWISNPSEGFSC
        S+GDG   YFWED W+G+KPLS+ FPR+Y LSE KL SVA +     + SS+SLG  RSLT  E+ ++ +LL LL   S    R D R WI NP  GFSC
Subjt:  SIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFP-SFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWISNPSEGFSC

Query:  ASFFRSLSSP-------------IPPPGASIFSSLWKVKIPKKVKFFACEVLHG
        +SFF+ L SP              P      F+SLWK+KIPKK+KFF  + L G
Subjt:  ASFFRSLSSP-------------IPPPGASIFSSLWKVKIPKKVKFFACEVLHG

A5BH71 Reverse transcriptase domain-containing protein1.6e-1635.76Show/hide
Query:  CFWGRIKVL-----EFISCSIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRP
        C W  I ++     +F    +GDG I  FWEDLW GD+PL V +PRL  +  +K   ++SI       S +  FRR+L+  E   +  L+  L      P
Subjt:  CFWGRIKVL-----EFISCSIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRP

Query:  KRRDNRSWISNPSEGFSCASFFRSLSSPIPPPGASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD
           D RSW  +PS  F   SFF +LS     P       +W  ++P KVK F   V H +VNT D
Subjt:  KRRDNRSWISNPSEGFSCASFFRSLSSPIPPPGASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD

A5BPI6 Uncharacterized protein1.3e-1638.41Show/hide
Query:  EFISCSIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWISNPSE
        +F    +GDG    FWEDLW GD+ L V FPRL ++  +K   ++SI  S    S +  FRR+L+  E  KV SL+  L      P   D RSW  + S 
Subjt:  EFISCSIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWISNPSE

Query:  GFSCASFFRSLSSPIPPPGASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD
         F+  SFF +LS     P       +W  ++P K+KFF   V H +VNT D
Subjt:  GFSCASFFRSLSSPIPPPGASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657506.9e-0427.4Show/hide
Query:  GDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWISNPSEGFSCASF
        GDG    FW D WV  KPL  +        E        +            F +   Y      + L +++ D       RD  SW  +    FS  S 
Subjt:  GDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWISNPSEGFSCASF

Query:  FRSLS-SPIPPPG-ASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD
        +  L+   +P P  AS F+ LWKV++P++VK F   V +  V T++
Subjt:  FRSLS-SPIPPPG-ASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTCAACCTCCTTAGGTCTCCAACAGAGTGTACTCACCCTTGGGAATAAATCGACTCCTGTAGAGAGGTTGACGCATCTCCACAACCTCCTCAAGGTCACGGGTTA
TCTTAACTTATCTGGTTGGGCACATCTTGCCGAGTCCGAGCACAAACCCCTCAAGGTGTTCTTCCCTTTACTCAACTATGCTTTATGCCTTGCATCGGAGTCGGTGTGGC
AAGCTGCACAGTTTTCTCTTGTTTTGCAGGCCACATCTTTCCCCTTTCAAATAAATTTACCGTTAGTGGCACGTGAACAGAAAAAATTTCCTGGAATTTCCGATGAGTTC
GCCTGCCAGTTCCATTGTTTCTGGGGGAGGATTAAAGTGCTAGAGTTTATTAGTTGTTCTATTGGGGATGGCTCCATTACCTATTTTTGGGAGGATTTGTGGGTTGGTGA
TAAACCTTTGAGTGTTATGTTCCCCCGTCTTTACCAGTTGTCCGAGAATAAGTTGCATTCAGTAGCTTCGATCTTTCCTAGCTTCGATTTCTCTTCTCTTTCCCTTGGCT
TTCGTCGCTCTCTCACCTATCGAGAGGCGACAAAGGTCGTCAGTCTTCTCTCTCTCTTGGCTGACCAGTCTTTTCGTCCTAAGAGAAGGGACAATAGATCCTGGATTTCA
AACCCGTCTGAGGGTTTCTCTTGTGCCTCTTTTTTCCGTTCTCTCTCCTCTCCTATTCCTCCTCCAGGAGCCTCCATTTTCTCCTCTCTGTGGAAGGTCAAAATTCCCAA
GAAAGTGAAGTTCTTTGCCTGTGAAGTTTTACATGGTCGGGTGAATACTCAGGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCCTCAACCTCCTTAGGTCTCCAACAGAGTGTACTCACCCTTGGGAATAAATCGACTCCTGTAGAGAGGTTGACGCATCTCCACAACCTCCTCAAGGTCACGGGTTA
TCTTAACTTATCTGGTTGGGCACATCTTGCCGAGTCCGAGCACAAACCCCTCAAGGTGTTCTTCCCTTTACTCAACTATGCTTTATGCCTTGCATCGGAGTCGGTGTGGC
AAGCTGCACAGTTTTCTCTTGTTTTGCAGGCCACATCTTTCCCCTTTCAAATAAATTTACCGTTAGTGGCACGTGAACAGAAAAAATTTCCTGGAATTTCCGATGAGTTC
GCCTGCCAGTTCCATTGTTTCTGGGGGAGGATTAAAGTGCTAGAGTTTATTAGTTGTTCTATTGGGGATGGCTCCATTACCTATTTTTGGGAGGATTTGTGGGTTGGTGA
TAAACCTTTGAGTGTTATGTTCCCCCGTCTTTACCAGTTGTCCGAGAATAAGTTGCATTCAGTAGCTTCGATCTTTCCTAGCTTCGATTTCTCTTCTCTTTCCCTTGGCT
TTCGTCGCTCTCTCACCTATCGAGAGGCGACAAAGGTCGTCAGTCTTCTCTCTCTCTTGGCTGACCAGTCTTTTCGTCCTAAGAGAAGGGACAATAGATCCTGGATTTCA
AACCCGTCTGAGGGTTTCTCTTGTGCCTCTTTTTTCCGTTCTCTCTCCTCTCCTATTCCTCCTCCAGGAGCCTCCATTTTCTCCTCTCTGTGGAAGGTCAAAATTCCCAA
GAAAGTGAAGTTCTTTGCCTGTGAAGTTTTACATGGTCGGGTGAATACTCAGGATTAG
Protein sequenceShow/hide protein sequence
MPSTSLGLQQSVLTLGNKSTPVERLTHLHNLLKVTGYLNLSGWAHLAESEHKPLKVFFPLLNYALCLASESVWQAAQFSLVLQATSFPFQINLPLVAREQKKFPGISDEF
ACQFHCFWGRIKVLEFISCSIGDGSITYFWEDLWVGDKPLSVMFPRLYQLSENKLHSVASIFPSFDFSSLSLGFRRSLTYREATKVVSLLSLLADQSFRPKRRDNRSWIS
NPSEGFSCASFFRSLSSPIPPPGASIFSSLWKVKIPKKVKFFACEVLHGRVNTQD