; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg021247 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021247
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRRM domain-containing protein
Genome locationscaffold6:45789698..45792387
RNA-Seq ExpressionSpg021247
SyntenySpg021247
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022134394.1 uncharacterized RNA-binding protein C1827.05c [Momordica charantia]3.4e-10996.21Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKAMKKKLNKATSLLS KKESADFLPL GGPGRKLPAQKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEFE
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLN  ELERKQHNKERTL EHRKLVERILKRDQARQKRIRAAGI+YECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPAPKKIKFDE
        QPAPKKIKFDE
Subjt:  QPAPKKIKFDE

XP_022922397.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata]3.4e-10995.28Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEF+
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYR+ PLNWSELERK+HNKERTL EHRKLVERILKR+QARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPAPKKIKFDED
        QP PKKIKFDED
Subjt:  QPAPKKIKFDED

XP_022993750.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima]9.0e-11094.81Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKAMKKKL+KATS LS+KKESADFLPLEGGPGRKLPAQKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARNRKTGKSRHFGYIEFE
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEH+LKVHLI PEHVHPKLWKGFNYR+KPL+WSELERKQHNKERTLDEH+KLVERILKRDQAR+KRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPAPKKIKFDED
        QPAPKKIKFDED
Subjt:  QPAPKKIKFDED

XP_023525015.1 MKI67 FHA domain-interacting nucleolar phosphoprotein [Cucurbita pepo subsp. pepo]2.9e-10894.81Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEF+
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYR+ PLNWSELERK+ NKERTL EHRKLVERILKR+QARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPAPKKIKFDED
        QP PKKIKFDED
Subjt:  QPAPKKIKFDED

XP_038885284.1 MKI67 FHA domain-interacting nucleolar phosphoprotein [Benincasa hispida]2.2e-10893.87Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKAMKKKL+KATSL  +K+ESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEFE
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYR+ PLNWSELERKQHNKERTLDEH+KLV+RI+KRDQARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPAPKKIKFDED
        QP PKKIKFDED
Subjt:  QPAPKKIKFDED

TrEMBL top hitse value%identityAlignment
A0A1S3C4U7 uncharacterized RNA-binding protein C1827.05c9.1e-10893.4Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKAMKKKL KAT L S+KKESADFLPLEGGPGRKLP QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGY+EFE
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYR+ PLNWSELERKQHNKERTL EH+KLV+RILKRDQARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPAPKKIKFDED
        QP PKKIKFDED
Subjt:  QPAPKKIKFDED

A0A6J1BYN0 uncharacterized RNA-binding protein C1827.05c1.7e-10996.21Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKAMKKKLNKATSLLS KKESADFLPL GGPGRKLPAQKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEFE
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLN  ELERKQHNKERTL EHRKLVERILKRDQARQKRIRAAGI+YECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPAPKKIKFDE
        QPAPKKIKFDE
Subjt:  QPAPKKIKFDE

A0A6J1E350 uncharacterized RNA-binding protein C1827.05c-like1.7e-10995.28Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEF+
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYR+ PLNWSELERK+HNKERTL EHRKLVERILKR+QARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPAPKKIKFDED
        QP PKKIKFDED
Subjt:  QPAPKKIKFDED

A0A6J1FJK1 uncharacterized RNA-binding protein C1827.05c-like4.5e-10792.45Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKAMKKKL+K T  LS+KKESADFLPLEGGPGRKLPAQKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARNRKTGKSRHFGYIEFE
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEH+LKVHLI PEHVHPKLWKGF+Y +KPL+WSELERKQHNKERTLDEH+KLV RILKRDQAR+KRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPAPKKIKFDED
        QPAPKKIKFDED
Subjt:  QPAPKKIKFDED

A0A6J1JZE0 uncharacterized RNA-binding protein C1827.05c-like4.4e-11094.81Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKAMKKKL+KATS LS+KKESADFLPLEGGPGRKLPAQKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARNRKTGKSRHFGYIEFE
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEH+LKVHLI PEHVHPKLWKGFNYR+KPL+WSELERKQHNKERTLDEH+KLVERILKRDQAR+KRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPAPKKIKFDED
        QPAPKKIKFDED
Subjt:  QPAPKKIKFDED

SwissProt top hitse value%identityAlignment
O74978 Uncharacterized RNA-binding protein C1827.05c2.3e-3141.94Show/hide
Query:  RKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLW
        +K+   K L+    VLY+GR+PHGF+EK+M  +F QFG V RLR++RNRKTG S+H+ +IEFES +VA +VA++MHNYLLY  +L+  +IP + VH  ++
Subjt:  RKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLW

Query:  KGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYE
        KG +  +K +  + + R QH K  + ++  KL+ R  ++ + ++++++  GI  E
Subjt:  KGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYE

Q3SZM1 MKI67 FHA domain-interacting nucleolar phosphoprotein4.0e-2837.5Show/hide
Query:  ATSLLS-NKKESADFLPLEGGPGRKLPAQKPLES-TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMH
        A  LLS N +E A F        R+   Q+  +  T  V+Y+G +P   +E ++  +F QFG V R R++R++KTG S+ +G++EFES +VAKI A++M+
Subjt:  ATSLLS-NKKESADFLPLEGGPGRKLPAQKPLES-TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMH

Query:  NYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIV
        NYL  E +LK H IPPE VH +L++ ++  +K  ++  +  K++N+ R+L +  ++ ER  K+++  +KR+   GIDY  P +V
Subjt:  NYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIV

Q6GL69 MKI67 FHA domain-interacting nucleolar phosphoprotein-like1.4e-2843.36Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSE
        V+YIG IP   +E ++  +F QFG V RLR++R++KTG S+ + Y+EFE  EVAKIVAD+M+NYL  E +LK   +PPE VHP+L+ G   +++      
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSE

Query:  LERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECP
        + R  +NK R+  E +K+ +R+L ++   +KR+   GIDY+ P
Subjt:  LERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECP

Q7SYS2 MKI67 FHA domain-interacting nucleolar phosphoprotein-like3.4e-2738.5Show/hide
Query:  MKKKLNKATSLLS-NKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKI
        M ++L ++  LLS + K   DF        RK   +K    T  V+YIG IP    E +++ +F QFG V RLR++R++KTG S+ + Y+E+E  EVAKI
Subjt:  MKKKLNKATSLLS-NKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKI

Query:  VADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECP
        VAD+M+NYL  E +LK   + PE VHP+L+ G N R++      + R  +N +R  +E +K+ +R++ ++   +KR+   GIDY+ P
Subjt:  VADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECP

Q8JIY8 MKI67 FHA domain-interacting nucleolar phosphoprotein3.9e-3140.62Show/hide
Query:  LLSNKKESADFLPLEGGPGRKLPAQKPLESTAT-----VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMH
        L  N KE A+F        +K+   K    T       VLY+G +P G FE +++ +F QFGKV RLR++R++KTG S+ +G++EFE  EVAKIVA++M+
Subjt:  LLSNKKESADFLPLEGGPGRKLPAQKPLESTAT-----VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMH

Query:  NYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSVQPAPK
        NYL+ E I+K H+IPPE VH KL+ G    +K   +  + R  +NK  T D+ +K+  ++L ++   +KR+ A GIDY+ P     + PA K
Subjt:  NYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSVQPAPK

Arabidopsis top hitse value%identityAlignment
AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.9e-0736.23Show/hide
Query:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHN
        ++S    L+IG I     E+ ++ +F  FG+V    I ++R TG++R FG++ F  P VA+IV    HN
Subjt:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHN

AT3G07810.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.9e-0736.23Show/hide
Query:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHN
        ++S    L+IG I     E+ ++ +F  FG+V    I ++R TG++R FG++ F  P VA+IV    HN
Subjt:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHN

AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.0e-0730Show/hide
Query:  PAQKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMH-----------------NYLLYEHI
        P ++ +ES + +  L+IG I     E+ ++ +FG++G +    I R+R TG++R FG+I F  P VA+ V    H                   +L  H 
Subjt:  PAQKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMH-----------------NYLLYEHI

Query:  LKVHLIPPEH
          +HLI P H
Subjt:  LKVHLIPPEH

AT4G26650.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-0629.63Show/hide
Query:  QKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMH-----------------NYLLYEHILK
        ++ +ES + +  L+IG I     E+ ++ +FG++G +    I R+R TG++R FG+I F  P VA+ V    H                   +L  H   
Subjt:  QKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMH-----------------NYLLYEHILK

Query:  VHLIPPEH
        +HLI P H
Subjt:  VHLIPPEH

AT5G04600.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.0e-7461.54Show/hide
Query:  MGAKAKKAMKKKLNKATS--------LLSNKKESADFLPLEGGPGRKLP-AQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKS
        MGAKAKKA+KK + K  +        L  N K SADFLPLEGGP RK P    PL++ ATVLYIGRIPHGF+E E+E FF QFG VKR+R+ARN+KTGKS
Subjt:  MGAKAKKAMKKKLNKATS--------LLSNKKESADFLPLEGGPGRKLP-AQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKS

Query:  RHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDY
        +HFG+I+FE PEVA+I A +M++YLL EH+LKVH+I PE+V P LW+GF   +KP++  ++ER+Q NKERTL+EHRK++++I+K+DQ R+KRI AAGI+Y
Subjt:  RHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDY

Query:  ECPEIVGSVQPAPKKIKFDED
        ECPE+VG+ QP PK+IKF E+
Subjt:  ECPEIVGSVQPAPKKIKFDED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTGAATAAGGCTACTTCTCTCTTATCCAACAAGAAGGAATCTGCCGATTTCTTGCCATTGGAGGGTGGCCCTGG
GCGTAAGTTACCGGCACAAAAGCCACTCGAAAGTACTGCTACTGTTCTCTACATTGGTCGCATACCCCATGGTTTCTTTGAGAAGGAGATGGAAGGGTTTTTTGGACAGT
TTGGGAAAGTCAAGAGATTAAGAATTGCTCGGAATAGAAAGACTGGGAAGTCGAGGCATTTTGGCTATATTGAATTTGAGTCTCCAGAGGTGGCTAAAATTGTAGCTGAT
TCTATGCATAACTATTTGTTGTACGAACACATTCTGAAAGTCCATCTAATTCCTCCCGAGCATGTTCATCCAAAACTATGGAAAGGTTTTAACTACCGCTATAAGCCCTT
AAATTGGTCTGAACTTGAGCGTAAACAGCACAACAAGGAAAGGACATTGGATGAGCACAGGAAGTTGGTGGAGAGGATCTTGAAGCGGGATCAGGCTAGACAGAAGAGGA
TAAGAGCTGCAGGGATTGATTACGAGTGCCCAGAAATTGTGGGTAGTGTCCAACCAGCTCCCAAGAAAATCAAGTTCGACGAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTGAATAAGGCTACTTCTCTCTTATCCAACAAGAAGGAATCTGCCGATTTCTTGCCATTGGAGGGTGGCCCTGG
GCGTAAGTTACCGGCACAAAAGCCACTCGAAAGTACTGCTACTGTTCTCTACATTGGTCGCATACCCCATGGTTTCTTTGAGAAGGAGATGGAAGGGTTTTTTGGACAGT
TTGGGAAAGTCAAGAGATTAAGAATTGCTCGGAATAGAAAGACTGGGAAGTCGAGGCATTTTGGCTATATTGAATTTGAGTCTCCAGAGGTGGCTAAAATTGTAGCTGAT
TCTATGCATAACTATTTGTTGTACGAACACATTCTGAAAGTCCATCTAATTCCTCCCGAGCATGTTCATCCAAAACTATGGAAAGGTTTTAACTACCGCTATAAGCCCTT
AAATTGGTCTGAACTTGAGCGTAAACAGCACAACAAGGAAAGGACATTGGATGAGCACAGGAAGTTGGTGGAGAGGATCTTGAAGCGGGATCAGGCTAGACAGAAGAGGA
TAAGAGCTGCAGGGATTGATTACGAGTGCCCAGAAATTGTGGGTAGTGTCCAACCAGCTCCCAAGAAAATCAAGTTCGACGAAGATTAG
Protein sequenceShow/hide protein sequence
MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVAD
SMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSVQPAPKKIKFDED