; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg021273 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021273
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold6:46107056..46107751
RNA-Seq ExpressionSpg021273
SyntenySpg021273
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4350693.1 hypothetical protein F8388_003414 [Cannabis sativa]1.3e-1624.14Show/hide
Query:  WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNL-------ILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMW
        W++ ++ +P K N+K +G++ N+ C LC + +E  +H +W C   + IW+ L        L   +MF++ +           L +     D +  + I+W
Subjt:  WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNL-------ILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMW

Query:  CIWNSRNRRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGL
         IW +RNR+ +    +++       Q+ ++       G   + P+ + +   +   ++W  P   S  +N DAA  D     GI+++ R + G  +S G+
Subjt:  CIWNSRNRRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGL

Query:  KKIDQKINMKSLEAMAIWEGLTPLFSESSRRI
        + ++   + K+ EA A+WE L  L +  + RI
Subjt:  KKIDQKINMKSLEAMAIWEGLTPLFSESSRRI

KAF4380543.1 hypothetical protein G4B88_027634 [Cannabis sativa]1.3e-1624.14Show/hide
Query:  WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNL-------ILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMW
        W++ ++ +P K N+K +G++ N+ C LC + +E  +H +W C   + IW+ L        L   +MF++ +           L +     D +  + I+W
Subjt:  WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNL-------ILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMW

Query:  CIWNSRNRRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGL
         IW +RNR+ +    +++       Q+ ++       G   + P+ + +   +   ++W  P   S  +N DAA  D     GI+++ R + G  +S G+
Subjt:  CIWNSRNRRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGL

Query:  KKIDQKINMKSLEAMAIWEGLTPLFSESSRRI
        + ++   + K+ EA A+WE L  L +  + RI
Subjt:  KKIDQKINMKSLEAMAIWEGLTPLFSESSRRI

XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]9.8e-1734.68Show/hide
Query:  RERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSRNRRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSH---------EEWKN
        R  W   D W WLV    + ++   ++I W IW SRNR I     +D+   Q    I  F    ID GT  S    S++   +L             W  
Subjt:  RERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSRNRRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSH---------EEWKN

Query:  PPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGLTPLFSESSRRITL
        PP N WKLNTDA+W +E  +GGI W+L D  G  +  G  KI +K  + +LE M I  GL  +  +S   I L
Subjt:  PPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGLTPLFSESSRRITL

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]2.4e-2335.18Show/hide
Query:  KKNENTSHLIWECKFSRGIWRNLILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSRNRRI-SGQHFLDQNINQTISQIQDFFKEQI
        KK E T H++WECK  + IW N        F + R  W   +YW+WL++     +  R +II   IW  RN+ I  G H   ++I   I +       Q 
Subjt:  KKNENTSHLIWECKFSRGIWRNLILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSRNRRI-SGQHFLDQNINQTISQIQDFFKEQI

Query:  DGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGLTPLFSESSRRITL
             +S      +     +   WK P  NSWKLNTDAAW  +    GI W+LRD  G  I  G + I  + N+  LE MAI EGL  +  E  R I L
Subjt:  DGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGLTPLFSESSRRITL

XP_030487056.1 uncharacterized protein LOC115703971 [Cannabis sativa]1.3e-1625.22Show/hide
Query:  WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNL-ILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSR
        W++ ++ +P K N+K +G++ N+ C LC + +E  +H +W C   +GIW+ L   K  +            D  + L +     D +  + I+W IW +R
Subjt:  WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNL-ILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSR

Query:  NRRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGLKKIDQK
        NR+ +    +++       Q+ ++       G   + P+ + +   +   ++W  P   S  +N DAA  D     GI+++ R + G  IS G++ ++  
Subjt:  NRRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGLKKIDQK

Query:  INMKSLEAMAIWEGLTPLFSESSRRI
         + K+ EA A+WE L  L +  + RI
Subjt:  INMKSLEAMAIWEGLTPLFSESSRRI

TrEMBL top hitse value%identityAlignment
A0A6J1CQG0 uncharacterized protein LOC1110132164.7e-1734.68Show/hide
Query:  RERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSRNRRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSH---------EEWKN
        R  W   D W WLV    + ++   ++I W IW SRNR I     +D+   Q    I  F    ID GT  S    S++   +L             W  
Subjt:  RERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSRNRRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSH---------EEWKN

Query:  PPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGLTPLFSESSRRITL
        PP N WKLNTDA+W +E  +GGI W+L D  G  +  G  KI +K  + +LE M I  GL  +  +S   I L
Subjt:  PPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGLTPLFSESSRRITL

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X11.2e-2335.18Show/hide
Query:  KKNENTSHLIWECKFSRGIWRNLILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSRNRRI-SGQHFLDQNINQTISQIQDFFKEQI
        KK E T H++WECK  + IW N        F + R  W   +YW+WL++     +  R +II   IW  RN+ I  G H   ++I   I +       Q 
Subjt:  KKNENTSHLIWECKFSRGIWRNLILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSRNRRI-SGQHFLDQNINQTISQIQDFFKEQI

Query:  DGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGLTPLFSESSRRITL
             +S      +     +   WK P  NSWKLNTDAAW  +    GI W+LRD  G  I  G + I  + N+  LE MAI EGL  +  E  R I L
Subjt:  DGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGLTPLFSESSRRITL

A0A7J6DX20 Uncharacterized protein6.2e-1724.14Show/hide
Query:  WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNL-------ILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMW
        W++ ++ +P K N+K +G++ N+ C LC + +E  +H +W C   + IW+ L        L   +MF++ +           L +     D +  + I+W
Subjt:  WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNL-------ILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMW

Query:  CIWNSRNRRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGL
         IW +RNR+ +    +++       Q+ ++       G   + P+ + +   +   ++W  P   S  +N DAA  D     GI+++ R + G  +S G+
Subjt:  CIWNSRNRRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGL

Query:  KKIDQKINMKSLEAMAIWEGLTPLFSESSRRI
        + ++   + K+ EA A+WE L  L +  + RI
Subjt:  KKIDQKINMKSLEAMAIWEGLTPLFSESSRRI

A0A7J6GC45 CCHC-type domain-containing protein6.2e-1724.14Show/hide
Query:  WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNL-------ILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMW
        W++ ++ +P K N+K +G++ N+ C LC + +E  +H +W C   + IW+ L        L   +MF++ +           L +     D +  + I+W
Subjt:  WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNL-------ILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMW

Query:  CIWNSRNRRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGL
         IW +RNR+ +    +++       Q+ ++       G   + P+ + +   +   ++W  P   S  +N DAA  D     GI+++ R + G  +S G+
Subjt:  CIWNSRNRRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGL

Query:  KKIDQKINMKSLEAMAIWEGLTPLFSESSRRI
        + ++   + K+ EA A+WE L  L +  + RI
Subjt:  KKIDQKINMKSLEAMAIWEGLTPLFSESSRRI

A0A803QCG6 Uncharacterized protein6.6e-1931.96Show/hide
Query:  AWKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNLILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSR
        AWK+ ++I+P  A + K+ I  ++ CSLC    E+  H +++CK +R IW++   K LT FN+ +   Q  DY Q L       D + +V IMW IW  R
Subjt:  AWKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNLILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSR

Query:  NRRISGQHFLDQN--INQTISQIQDFFKEQIDGGTLRSNPSTSK-KTGSHLSHE-EWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGLKK
        N+   G      +  +    S  QD+ + +   G   ++PST      +H   +  W  P LN +KLN DAA   E  + GI  +LRD  G  I+   K 
Subjt:  NRRISGQHFLDQN--INQTISQIQDFFKEQIDGGTLRSNPSTSK-KTGSHLSHE-EWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGLKK

Query:  IDQKINMKSLEAMAIWEGL
        +        +EA A++  L
Subjt:  IDQKINMKSLEAMAIWEGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein4.5e-1222.52Show/hide
Query:  WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNLILKSLTMFNLCRERWQPMDYWQWL------VENTENGDLDRV--VIIM
        W+ L+  +     +  +G+  + +C  C ++NE+ +H ++ C F+   WR      L+  +L R +    D+ + +      V++T   D  ++  V ++
Subjt:  WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNLILKSLTMFNLCRERWQPMDYWQWL------VENTENGDLDRV--VIIM

Query:  WCIWNSRNRRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFG
        W IW +RN  +  + F +      +S   +         + +  PS +++     +  EW+NPP    K N DA +  +       W++R+  G+PIS+G
Subjt:  WCIWNSRNRRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFG

Query:  LKKIDQKINMKSLEAMAIWEGL
          K+    N    E  A+   L
Subjt:  LKKIDQKINMKSLEAMAIWEGL

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.4e-0520.15Show/hide
Query:  WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNLILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVII-----MWCI
        W +  + +  +  ++  G+   + C LC   +++ +HL +EC+FS  +WR       T         Q MD   WL+  +   ++  ++ +     ++ I
Subjt:  WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNLILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVII-----MWCI

Query:  WNSRNRRISGQHFLDQNINQTISQIQDFFKEQID
        W  RN+R+     + ++    +  IQ   + ++D
Subjt:  WNSRNRRISGQHFLDQNINQTISQIQDFFKEQID

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.7e-0623.46Show/hide
Query:  LCRERWQPMDYWQWLVENTENGDLDRVV-----IIMWCIWNSRN------RRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHE
        LC     P +  + + +   +  +DRV       +MW IW S N       R   Q  ++  +N T   + +    +   G   ++PS + K        
Subjt:  LCRERWQPMDYWQWLVENTENGDLDRVV-----IIMWCIWNSRN------RRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHE

Query:  EWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGLKKIDQKINMKSLE-AMAIW
         W  P  +  K N DA+  +   + G+ W+LR+S G+ I  G+ K   ++  +  E +  IW
Subjt:  EWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGLKKIDQKINMKSLE-AMAIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGCGTGGAAGATCCTCAACGACATTATCCCCAACAAAGCAAACATAAAAAAGAAAGGGATTGACTTTAATTCTACCTGCTCTTTATGTGGAAAAAAAAATGAGAA
CACGAGCCACCTCATATGGGAATGTAAATTCTCAAGAGGAATATGGCGGAATTTAATTCTAAAATCTCTAACCATGTTTAACCTTTGCAGGGAAAGATGGCAACCTATGG
ACTATTGGCAGTGGTTGGTAGAGAACACCGAGAATGGAGACCTCGACAGGGTTGTGATTATTATGTGGTGCATTTGGAATTCAAGAAATAGAAGAATCTCAGGCCAACAT
TTTCTAGACCAGAACATCAATCAGACTATTTCTCAAATTCAAGATTTTTTCAAAGAGCAAATAGATGGTGGTACCTTGCGTAGCAATCCCTCGACGTCAAAGAAAACAGG
GAGCCATCTGAGTCATGAAGAGTGGAAGAATCCACCCCTAAATTCATGGAAATTGAACACCGACGCCGCCTGGTTCGACGAGATCGGGATGGGAGGTATCAAATGGGTGC
TTCGTGACTCCGTCGGATCCCCGATTTCCTTTGGCCTGAAGAAGATTGACCAAAAAATTAATATGAAATCCCTGGAAGCCATGGCCATTTGGGAAGGGCTCACACCTTTA
TTTTCAGAATCTTCAAGGAGAATCACCCTCGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGCGTGGAAGATCCTCAACGACATTATCCCCAACAAAGCAAACATAAAAAAGAAAGGGATTGACTTTAATTCTACCTGCTCTTTATGTGGAAAAAAAAATGAGAA
CACGAGCCACCTCATATGGGAATGTAAATTCTCAAGAGGAATATGGCGGAATTTAATTCTAAAATCTCTAACCATGTTTAACCTTTGCAGGGAAAGATGGCAACCTATGG
ACTATTGGCAGTGGTTGGTAGAGAACACCGAGAATGGAGACCTCGACAGGGTTGTGATTATTATGTGGTGCATTTGGAATTCAAGAAATAGAAGAATCTCAGGCCAACAT
TTTCTAGACCAGAACATCAATCAGACTATTTCTCAAATTCAAGATTTTTTCAAAGAGCAAATAGATGGTGGTACCTTGCGTAGCAATCCCTCGACGTCAAAGAAAACAGG
GAGCCATCTGAGTCATGAAGAGTGGAAGAATCCACCCCTAAATTCATGGAAATTGAACACCGACGCCGCCTGGTTCGACGAGATCGGGATGGGAGGTATCAAATGGGTGC
TTCGTGACTCCGTCGGATCCCCGATTTCCTTTGGCCTGAAGAAGATTGACCAAAAAATTAATATGAAATCCCTGGAAGCCATGGCCATTTGGGAAGGGCTCACACCTTTA
TTTTCAGAATCTTCAAGGAGAATCACCCTCGTTTGA
Protein sequenceShow/hide protein sequence
MCAWKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNLILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSRNRRISGQH
FLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGLTPL
FSESSRRITLV