CuGenDBv2

Gene ID	Spg021274
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Rac-like GTP-binding protein ARAC1
Genome location	scaffold6:47963248..47965334
RNA-Seq Expression	Spg021274
Synteny	Spg021274
Gene Ontology terms	GO:0007264 - small GTPase mediated signal transduction (biological process) GO:0009073 - aromatic amino acid family biosynthetic process (biological process) GO:0005737 - cytoplasm (cellular component) GO:0003856 - 3-dehydroquinate synthase activity (molecular function) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR001806 - Small GTPase IPR003578 - Small GTPase Rho IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0052949.1 rac-like GTP-binding protein RHO1 [Cucumis melo var. makuwa]

6.0e-34

90.59

Show/hide

Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPIS AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKK KAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

KAA8532002.1 hypothetical protein F0562_006856 [Nyssa sinensis]

2.7e-34

90.59

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Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPIS AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAI+VVLQPPKQKKKKGKAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

TYK11405.1 rac-like GTP-binding protein RHO1 [Cucumis melo var. makuwa]

6.0e-34

90.59

Show/hide

Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPIS AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKK KAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

XP_008448529.1 PREDICTED: rac-like GTP-binding protein ARAC1 [Cucumis melo]

6.0e-34

90.59

Show/hide

Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPIS AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKK KAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

XP_024181656.1 rac-like GTP-binding protein ARAC1 [Rosa chinensis]

2.7e-34

90.59

Show/hide

Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPI+ AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BKI5 rac-like GTP-binding protein ARAC1

2.9e-34

90.59

Show/hide

Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPIS AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKK KAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

A0A2P6RLU2 Putative small GTPase superfamily, P-loop containing nucleoside triphosphate hydrolase

1.3e-34

90.59

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Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPI+ AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

A0A5A7UHD4 Rac-like GTP-binding protein RHO1

2.9e-34

90.59

Show/hide

Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPIS AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKK KAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

A0A5D3CIK6 Rac-like GTP-binding protein RHO1

2.9e-34

90.59

Show/hide

Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPIS AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKK KAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

A0A5J5AQH6 Uncharacterized protein

1.3e-34

90.59

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Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPIS AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAI+VVLQPPKQKKKKGKAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

SwissProt top hits

e value

%identity

Alignment

P92978 Rac-like GTP-binding protein ARAC11

2.8e-34

84.71

Show/hide

Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPI+ AQGEELRK IGAP YIECSSKTQ+NVK VFDAAIRVVLQPPKQKKKK KAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

Q35638 Rac-like GTP-binding protein RHO1

1.7e-34

84.71

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Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFF+DHPGAVPI+ AQGEELRKLI APAYIECSSK+QQNVK VFDAAIRVVLQPPKQKKKK KAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

Q38902 Rac-like GTP-binding protein ARAC1

8.8e-36

87.06

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Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPI+ AQGEEL+KLIGAPAYIECSSKTQ+NVKGVFDAAIRVVLQPPKQKKKK KAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

Q39435 Rac-like GTP-binding protein RHO1

9.7e-35

85.88

Show/hide

Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPI+ AQGEELRKLIGAPAYIECSSKTQQNVK VFDAAI+VVLQPPK KKKK KAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

Q9SBJ6 Rac-like GTP-binding protein ARAC6

7.4e-35

84.71

Show/hide

Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPI+  QGEEL+KLIGAPAYIECSSK+Q+NVKGVFDAAIRVVLQPPKQKKKK KAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

Arabidopsis top hits

e value

%identity

Alignment

AT2G17800.1 Arabidopsis RAC-like 1

6.2e-37

87.06

Show/hide

Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPI+ AQGEEL+KLIGAPAYIECSSKTQ+NVKGVFDAAIRVVLQPPKQKKKK KAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

AT2G17800.2 Arabidopsis RAC-like 1

6.2e-37

87.06

Show/hide

Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPI+ AQGEEL+KLIGAPAYIECSSKTQ+NVKGVFDAAIRVVLQPPKQKKKK KAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

AT3G51290.2 Protein of unknown function (DUF630) ;Protein of unknown function (DUF632)

2.0e-35

84.71

Show/hide

Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPI+ AQGEELRK IGAP YIECSSKTQ+NVK VFDAAIRVVLQPPKQKKKK KAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

AT3G51300.1 RHO-related protein from plants 1

2.0e-35

84.71

Show/hide

Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPI+ AQGEELRK IGAP YIECSSKTQ+NVK VFDAAIRVVLQPPKQKKKK KAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

AT4G35950.1 RAC-like 6

5.3e-36

84.71

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Query:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL
        ++L+  +LDLRDDKQFFIDHPGAVPI+  QGEEL+KLIGAPAYIECSSK+Q+NVKGVFDAAIRVVLQPPKQKKKK KAQKACSIL
Subjt:  LMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGACTGCCCTGGATTACTTCTCATTGATGTTGATTTTTTATGAGCTAGATCTTCGAGATGATAAGCAGTTCTTTATTGACCATCCTGGCGCAGTTCCTATTTCAGCAGC
TCAGGGAGAGGAGCTTAGGAAGCTGATCGGTGCTCCTGCATACATCGAGTGCAGTTCAAAAACTCAGCAGAATGTGAAGGGAGTTTTTGATGCAGCAATTAGGGTTGTAC
TTCAACCTCCAAAGCAGAAGAAAAAGAAGGGCAAAGCTCAGAAAGCGTGCTCGATATTATGA

mRNA sequence

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Protein sequence

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MTALDYFSLMLIFYELDLRDDKQFFIDHPGAVPISAAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKAQKACSIL

Spg021274 (gene) of Sponge gourd (cylindrica) v1 genome