; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg021280 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021280
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionIntegrase-type DNA-binding superfamily protein
Genome locationscaffold6:45594150..45594914
RNA-Seq ExpressionSpg021280
SyntenySpg021280
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2019597.1 hypothetical protein ES319_D07G007500v1 [Gossypium barbadense]3.7e-0933.57Show/hide
Query:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEMED
        YRG+R R   +  SEI  P  K ++W+G+F+T E A  AHDV A   K     LNFPE   S P  P ++S +D+   A +AA     + +   + +   
Subjt:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEMED

Query:  SGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSG
        S  S    +N +Y+ +T ++++EI+ + S+G S     SG
Subjt:  SGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSG

KAE8649074.1 hypothetical protein Csa_023806, partial [Cucumis sativus]3.7e-0943.43Show/hide
Query:  RRYRGIRKRG-NRVSSEIHCPEM--KKQLWIGSFTTNEEAVLAHDVVAY-----QAKLNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDI
        +RYRG+RKRG  + +S I+ P+   +KQLWIGSF T E A  A+D VA      +A+LNFPE   + P  PP+++++ I  +AR AA+G      G  I
Subjt:  RRYRGIRKRG-NRVSSEIHCPEM--KKQLWIGSFTTNEEAVLAHDVVAY-----QAKLNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDI

MBA0876386.1 hypothetical protein [Gossypium schwendimanii]1.8e-0832.86Show/hide
Query:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEMED
        YRG+R R   +  SEI  P  K ++W+G+F+T E A  AHDV A   K     LNFPE   S P  P ++S +D+   A +AA     + +   + +   
Subjt:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEMED

Query:  SGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSG
        S  S +  +N + + +T ++++EI+ + S+G S     SG
Subjt:  SGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSG

TYG59716.1 hypothetical protein ES288_D07G008700v1 [Gossypium darwinii]3.7e-0933.57Show/hide
Query:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEMED
        YRG+R R   +  SEI  P  K ++W+G+F+T E A  AHDV A   K     LNFPE   S P  P ++S +D+   A +AA     + +   + +   
Subjt:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEMED

Query:  SGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSG
        S  S    +N +Y+ +T ++++EI+ + S+G S     SG
Subjt:  SGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSG

XP_004152323.1 ethylene-responsive transcription factor ERF021 [Cucumis sativus]3.7e-0943.43Show/hide
Query:  RRYRGIRKRG-NRVSSEIHCPEM--KKQLWIGSFTTNEEAVLAHDVVAY-----QAKLNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDI
        +RYRG+RKRG  + +S I+ P+   +KQLWIGSF T E A  A+D VA      +A+LNFPE   + P  PP+++++ I  +AR AA+G      G  I
Subjt:  RRYRGIRKRG-NRVSSEIHCPEM--KKQLWIGSFTTNEEAVLAHDVVAY-----QAKLNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDI

TrEMBL top hitse value%identityAlignment
A0A0A0KTL4 AP2/ERF domain-containing protein1.8e-0943.43Show/hide
Query:  RRYRGIRKRG-NRVSSEIHCPEM--KKQLWIGSFTTNEEAVLAHDVVAY-----QAKLNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDI
        +RYRG+RKRG  + +S I+ P+   +KQLWIGSF T E A  A+D VA      +A+LNFPE   + P  PP+++++ I  +AR AA+G      G  I
Subjt:  RRYRGIRKRG-NRVSSEIHCPEM--KKQLWIGSFTTNEEAVLAHDVVAY-----QAKLNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDI

A0A5D2BVX2 AP2/ERF domain-containing protein1.8e-0933.57Show/hide
Query:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEMED
        YRG+R R   +  SEI  P  K ++W+G+F+T E A  AHDV A   K     LNFPE   S P  P ++S +D+   A +AA     + +   + +   
Subjt:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEMED

Query:  SGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSG
        S  S    +N +Y+ +T ++++EI+ + S+G S     SG
Subjt:  SGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSG

A0A5J5QM84 AP2/ERF domain-containing protein1.8e-0933.57Show/hide
Query:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEMED
        YRG+R R   +  SEI  P  K ++W+G+F+T E A  AHDV A   K     LNFPE   S P  P ++S +D+   A +AA     + +   + +   
Subjt:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEMED

Query:  SGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSG
        S  S    +N +Y+ +T ++++EI+ + S+G S     SG
Subjt:  SGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSG

A0A7J9B685 AP2/ERF domain-containing protein1.5e-0832.86Show/hide
Query:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEMED
        YRG+R R   +  SEI  P  K ++W+G+F+T E A  AHDV A   K     LNFPE   S P  P ++S +D+   A +AA     + +   + +   
Subjt:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEMED

Query:  SGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSG
        S  S    +N + + +T ++++EI+ + S+G S     SG
Subjt:  SGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSG

A0A7J9N011 AP2/ERF domain-containing protein8.9e-0932.86Show/hide
Query:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEMED
        YRG+R R   +  SEI  P  K ++W+G+F+T E A  AHDV A   K     LNFPE   S P  P ++S +D+   A +AA     + +   + +   
Subjt:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEMED

Query:  SGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSG
        S  S +  +N + + +T ++++EI+ + S+G S     SG
Subjt:  SGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSG

SwissProt top hitse value%identityAlignment
A2WZI4 Dehydration-responsive element-binding protein 1F2.1e-0735.54Show/hide
Query:  RSAGERSWRR-----YRGIRKR--GNRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQ------AKLNFPEYVSSHPFLPPNSSIKDICMVARQAA
        R AG + +R      YRG+R R  G+R   E+  P+ + ++W+G++ T E A  AHDV A        A+LNFP+  S+ P     +S +DI + A QAA
Subjt:  RSAGERSWRR-----YRGIRKR--GNRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQ------AKLNFPEYVSSHPFLPPNSSIKDICMVARQAA

Query:  DGYRAAAEGLDIVEMEDSGRS
        + YR     L + E    G S
Subjt:  DGYRAAAEGLDIVEMEDSGRS

Q39127 Ethylene-responsive transcription factor TINY4.3e-0833.1Show/hide
Query:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAA-EGLDIVEME
        YRG+RKR   +  SEI  P  K ++W+G+F + E A  AHDV A   K     LNFP+   S P  P + S +DI + A +AA    + +      +   
Subjt:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAA-EGLDIVEME

Query:  DSGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSGG
         S  S   E+      T ++++ EI+ + S+G S   LT  G
Subjt:  DSGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSGG

Q8S9Z5 Dehydration-responsive element-binding protein 1F2.1e-0735.54Show/hide
Query:  RSAGERSWRR-----YRGIRKR--GNRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQ------AKLNFPEYVSSHPFLPPNSSIKDICMVARQAA
        R AG + +R      YRG+R R  G+R   E+  P+ + ++W+G++ T E A  AHDV A        A+LNFP+  S+ P     +S +DI + A QAA
Subjt:  RSAGERSWRR-----YRGIRKR--GNRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQ------AKLNFPEYVSSHPFLPPNSSIKDICMVARQAA

Query:  DGYRAAAEGLDIVEMEDSGRS
        + YR     L + E    G S
Subjt:  DGYRAAAEGLDIVEMEDSGRS

Q9C9I2 Ethylene-responsive transcription factor ERF0211.6e-0738.26Show/hide
Query:  ARSAGERSWRRYRGIRKR-GNRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAY-----QAKLNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAA
        A++ G+     YRG+RKR   +  SEI  P  K ++W+GSF T E A  A+DV A+     +A+LNFPE  SS P  P +SS   I M   +A       
Subjt:  ARSAGERSWRRYRGIRKR-GNRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAY-----QAKLNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAA

Query:  AEGLDIVEMEDSGRS
         EG +     DS  S
Subjt:  AEGLDIVEMEDSGRS

Q9SJR0 Ethylene-responsive transcription factor ERF0243.9e-0938.6Show/hide
Query:  YRGIRKR--GNRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAY-----QAKLNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEME
        YRG+R+R   N+  SEI  P    ++W+G+F+T E A +A+DV A      QA+LNFP  VSS P  P + S  DI   A  AA  + AA + + ++   
Subjt:  YRGIRKR--GNRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAY-----QAKLNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEME

Query:  DSGRSIIQEANSEY
        +S  S +   NS Y
Subjt:  DSGRSIIQEANSEY

Arabidopsis top hitse value%identityAlignment
AT1G01250.1 Integrase-type DNA-binding superfamily protein2.6e-0837.25Show/hide
Query:  YRGIRK-RGNRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAY-----QAKLNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEMED
        Y G+RK R  +  SEI  P  K ++W+GSF   E A  A+DV A+     +A+LNFPE +   P  P   + +DI + A +AA+  +    G D V   D
Subjt:  YRGIRK-RGNRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAY-----QAKLNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEMED

Query:  SG
         G
Subjt:  SG

AT1G71450.1 Integrase-type DNA-binding superfamily protein1.1e-0838.26Show/hide
Query:  ARSAGERSWRRYRGIRKR-GNRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAY-----QAKLNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAA
        A++ G+     YRG+RKR   +  SEI  P  K ++W+GSF T E A  A+DV A+     +A+LNFPE  SS P  P +SS   I M   +A       
Subjt:  ARSAGERSWRRYRGIRKR-GNRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAY-----QAKLNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAA

Query:  AEGLDIVEMEDSGRS
         EG +     DS  S
Subjt:  AEGLDIVEMEDSGRS

AT2G36450.1 Integrase-type DNA-binding superfamily protein2.7e-1038.6Show/hide
Query:  YRGIRKR--GNRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAY-----QAKLNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEME
        YRG+R+R   N+  SEI  P    ++W+G+F+T E A +A+DV A      QA+LNFP  VSS P  P + S  DI   A  AA  + AA + + ++   
Subjt:  YRGIRKR--GNRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAY-----QAKLNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEME

Query:  DSGRSIIQEANSEY
        +S  S +   NS Y
Subjt:  DSGRSIIQEANSEY

AT2G44940.1 Integrase-type DNA-binding superfamily protein2.6e-0833.57Show/hide
Query:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYR------AAAEGLD
        YRG+R R   +  SEI  P  K ++W+G++ T E A  AHDV A   K     LNFP+     P  P  +S KDI   A  AA  ++      + +E  +
Subjt:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYR------AAAEGLD

Query:  IVEMEDSGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSS
        IVE E S   + Q  +S+   TT     E    S    S+
Subjt:  IVEMEDSGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSS

AT5G25810.1 Integrase-type DNA-binding superfamily protein3.0e-0933.1Show/hide
Query:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAA-EGLDIVEME
        YRG+RKR   +  SEI  P  K ++W+G+F + E A  AHDV A   K     LNFP+   S P  P + S +DI + A +AA    + +      +   
Subjt:  YRGIRKRG-NRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAK-----LNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAA-EGLDIVEME

Query:  DSGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSGG
         S  S   E+      T ++++ EI+ + S+G S   LT  G
Subjt:  DSGRSIIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACGCAGCGCCGGTGAGAGGAGTTGGAGGAGGTACAGAGGAATTCGGAAGAGGGGTAACAGAGTGTCGTCGGAGATCCACTGCCCAGAGATGAAGAAGCAGCTTTG
GATAGGCAGCTTCACGACGAACGAAGAGGCAGTGCTGGCCCATGACGTCGTCGCCTACCAGGCTAAACTCAATTTCCCCGAGTATGTCAGCAGCCACCCCTTTCTCCCAC
CCAACTCCTCTATCAAAGACATTTGCATGGTAGCTAGACAAGCAGCTGATGGCTATCGAGCTGCTGCTGAGGGACTGGACATAGTGGAGATGGAGGATTCGGGTAGGAGT
ATTATCCAAGAAGCCAATAGTGAGTATCTGATGACAACGGCTAAGGATGTGGCGGAGATCATCCCGATCAGCTCAGTGGGGCCGTCGTCGCCCCAATTGACCTCCGGTGG
GCTGACACACGTTGCATTGCAGGAGATGGGGGATTTCGAGGCCGGAGTGTTTTCTTACCAAGGATCCGATTCGATCATCCAATCCATTAGGGACTGTCCAATGTATTCAC
CGTTGCCGGATTATGATTGTTCTTACCATGAGGCGTTTGGCCAGCATACAACACCCATGCCGGCAACACAGCCGCCGTTTTCTAACGAAGCATTTACCGACGGAGTAGGA
GAGCCACCACTCCAGCAAATAATGCCGGACGTTGTTCTTATCACAGCCGGATTGGATATTGGAGAAGATGGACGACGGGGATGGGAGTATCAAAGTCATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACGCAGCGCCGGTGAGAGGAGTTGGAGGAGGTACAGAGGAATTCGGAAGAGGGGTAACAGAGTGTCGTCGGAGATCCACTGCCCAGAGATGAAGAAGCAGCTTTG
GATAGGCAGCTTCACGACGAACGAAGAGGCAGTGCTGGCCCATGACGTCGTCGCCTACCAGGCTAAACTCAATTTCCCCGAGTATGTCAGCAGCCACCCCTTTCTCCCAC
CCAACTCCTCTATCAAAGACATTTGCATGGTAGCTAGACAAGCAGCTGATGGCTATCGAGCTGCTGCTGAGGGACTGGACATAGTGGAGATGGAGGATTCGGGTAGGAGT
ATTATCCAAGAAGCCAATAGTGAGTATCTGATGACAACGGCTAAGGATGTGGCGGAGATCATCCCGATCAGCTCAGTGGGGCCGTCGTCGCCCCAATTGACCTCCGGTGG
GCTGACACACGTTGCATTGCAGGAGATGGGGGATTTCGAGGCCGGAGTGTTTTCTTACCAAGGATCCGATTCGATCATCCAATCCATTAGGGACTGTCCAATGTATTCAC
CGTTGCCGGATTATGATTGTTCTTACCATGAGGCGTTTGGCCAGCATACAACACCCATGCCGGCAACACAGCCGCCGTTTTCTAACGAAGCATTTACCGACGGAGTAGGA
GAGCCACCACTCCAGCAAATAATGCCGGACGTTGTTCTTATCACAGCCGGATTGGATATTGGAGAAGATGGACGACGGGGATGGGAGTATCAAAGTCATGAATGA
Protein sequenceShow/hide protein sequence
MARSAGERSWRRYRGIRKRGNRVSSEIHCPEMKKQLWIGSFTTNEEAVLAHDVVAYQAKLNFPEYVSSHPFLPPNSSIKDICMVARQAADGYRAAAEGLDIVEMEDSGRS
IIQEANSEYLMTTAKDVAEIIPISSVGPSSPQLTSGGLTHVALQEMGDFEAGVFSYQGSDSIIQSIRDCPMYSPLPDYDCSYHEAFGQHTTPMPATQPPFSNEAFTDGVG
EPPLQQIMPDVVLITAGLDIGEDGRRGWEYQSHE