; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg021303 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021303
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description33 kDa ribonucleoprotein, chloroplastic
Genome locationscaffold6:46938724..46940477
RNA-Seq ExpressionSpg021303
SyntenySpg021303
Gene Ontology termsGO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577717.1 hypothetical protein SDJN03_25291, partial [Cucurbita argyrosperma subsp. sororia]4.3e-11583.88Show/hide
Query:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD
        MATL+SAIPIISQY         SSSSS+LSF KLPSAIKLRISFSSPLLSLNPT+A+ P  LFLTNPS NR    GGGGR CSAVQEVSLEEASE+NQD
Subjt:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD

Query:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP
        VNQK+KLYIFNLPWSFSVVDIKE FGQCGTV DVE        IIKQKNGRSRGFAFVTMASPDEAQAAI+KF+SQEISGRVI+VEFAKRLKKPPPP+PP
Subjt:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP

Query:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK
        GPPPGETV+KLYVSNLAWK RS+NLR+FFSENFNPIAARVVFDSPSG+SAGYGFVSFATREEAETALSSLEGK
Subjt:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK

XP_022923294.1 33 kDa ribonucleoprotein, chloroplastic [Cucurbita moschata]8.0e-11483.15Show/hide
Query:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD
        MATL+SAIPIISQY S       SSSSS+LS   LPSAIKLRISFSSPLLS NPT+A+ P  LFLTNPS NR    GGGGR CSAVQEVSLEEASE+NQD
Subjt:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD

Query:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP
        VNQK+KLYIFNLPWSFSVVDIKE FGQCGTV DVE        IIKQKNGRSRGFAFVTMASPDEAQAAI+KF+SQEISGRVI+VEFAKRLKKPPPP+PP
Subjt:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP

Query:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK
        GPPPGETV+KLYVSNLAWK RS+NLR+FFSENFNPIAARVVFDSPSG+SAGYGFVSFATREEAETALSSLEGK
Subjt:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK

XP_023007582.1 29 kDa ribonucleoprotein A, chloroplastic [Cucurbita maxima]8.6e-11684.98Show/hide
Query:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD
        MATL+SAIPIISQY +SSSS S SSSSS+LSF KLPSAIKLRISFSSPLLSLNPT+A+ P  LFLTNP  NR    GGG R CSAVQEVSLEEASE+NQD
Subjt:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD

Query:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP
        VNQK+KLYIFNLPWSFSVVDIKE FGQCGTV DVE        IIKQKNGRSRGFAFVTMASPDEAQAAI+KF+SQEISGRVI+VEFAKRLKKPPPP+PP
Subjt:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP

Query:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK
        GPPPGETV+KLYVSNLAWK RS+NLR+FFSENFNPIAARVVFDSPSG+SAGYGFVSFATREEAETALSSLEGK
Subjt:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK

XP_023551853.1 29 kDa ribonucleoprotein A, chloroplastic [Cucurbita pepo subsp. pepo]2.1e-11484.62Show/hide
Query:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD
        MATL+SAIPIISQY SSSSS   SSSSS+LSF  LPSAIKLRIS SSPLLSLNPT+A+ P  LFLTNPS NR    GGGGR  SAVQEVSLEEASE+NQD
Subjt:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD

Query:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP
        VNQK+KLYIFNLPWSFSVVDIKE FGQCGTV DVE        IIKQKNGRSRGFAFVTMASPDEAQAAI+KF+SQEISGRVI+VEFAKRLKKPPPP+PP
Subjt:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP

Query:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK
        GPPPGETV+KLYVSNLAWK RS+NLR+FFSENFNPIAARVVFDSPSG+SAGYGFVSFATREEAETALSSLEGK
Subjt:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK

XP_038904114.1 33 kDa ribonucleoprotein, chloroplastic [Benincasa hispida]3.4e-11283.15Show/hide
Query:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD
        MATL+SAIPIISQY         SSSSS+L   KLPSAIKLRISFSSPL  LNPT+AI P SL L     +R+ GGGGG RLCSAVQEVSLEEASEQN+D
Subjt:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD

Query:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP
        VNQKKKLYIFNLPWSFSVVDIKELFGQCGTV DVE        IIKQKNGRSRGFAFVTMASPDEAQAAI+KF+SQEISGRVI+VEFAKRLKKPPPP+PP
Subjt:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP

Query:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK
        GPPP ETVNKLYVSNLAWKVRSSNLR+FFSENFNP+AARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK
Subjt:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK

TrEMBL top hitse value%identityAlignment
A0A0A0L1U2 Uncharacterized protein1.7e-10980.95Show/hide
Query:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD
        M T++S +PIIS Y SSSS    SSS+S+L F KLPS IKLRISFSSPLLSLNPT+ I P S    N S NR    GGG RLCSA+QEV+LEEASE+NQD
Subjt:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD

Query:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP
        VNQK+KLYIFNLPWS SVVDIKELFGQCGTV+DVE        IIKQKNGRSRGFAFVTMASPDEAQAAI+KF+SQEISGRVI+VEFAKRLKKPPPP+PP
Subjt:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP

Query:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK
        GPPPGETVNKLYVSNLAWKVRS+NLRDFFSENFNPIAARVVFDSP+GRSAGYGFVSFATREEA+TALSSLEGK
Subjt:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK

A0A1S3BK84 28 kDa ribonucleoprotein, chloroplastic1.3e-10981.32Show/hide
Query:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD
        MATL+SA+PIIS Y S       SSSSS+L F KLPSAIKLRISFSSPLLSLNP + I P S        N S   GGGGRLCSAVQEVSLEEASE+ QD
Subjt:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD

Query:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP
        VNQKKKLYIFNLPWS SVVDIKELFGQCGTV+DVE        IIKQKNGRSRGFAFVTMASPDEAQAAI+KF+SQEISGRVI+VEFAKR K+PPPP+PP
Subjt:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP

Query:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK
        GPPPGETVNKLYVSNLAWKVRSSNLRDFFSE+FNPIAARVVFDSPSGRSAGYGFVSFATREEA+TALSSLEGK
Subjt:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK

A0A5A7UAR3 28 kDa ribonucleoprotein2.4e-10880.59Show/hide
Query:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD
        MATL+SA+PIIS Y S       SSSSS+L F KLPSAIKLRISFSSPLLSLNP + I P S        N S   GGGGRLCSAVQEVSLEEASE+ QD
Subjt:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD

Query:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP
        VNQKKKLYIFNLPWS SVVDIKELFGQCGTV+D          IIKQKNGRSRGFAFVTMASPDEAQAAI+KF+SQEISGRVI+VEFAKR K+PPPP+PP
Subjt:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP

Query:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK
        GPPPGETVNKLYVSNLAWKVRSSNLRDFFSE+FNPIAARVVFDSPSGRSAGYGFVSFATREEA+TALSSLEGK
Subjt:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK

A0A6J1E5Z7 33 kDa ribonucleoprotein, chloroplastic3.9e-11483.15Show/hide
Query:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD
        MATL+SAIPIISQY S       SSSSS+LS   LPSAIKLRISFSSPLLS NPT+A+ P  LFLTNPS NR    GGGGR CSAVQEVSLEEASE+NQD
Subjt:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD

Query:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP
        VNQK+KLYIFNLPWSFSVVDIKE FGQCGTV DVE        IIKQKNGRSRGFAFVTMASPDEAQAAI+KF+SQEISGRVI+VEFAKRLKKPPPP+PP
Subjt:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP

Query:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK
        GPPPGETV+KLYVSNLAWK RS+NLR+FFSENFNPIAARVVFDSPSG+SAGYGFVSFATREEAETALSSLEGK
Subjt:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK

A0A6J1KZ42 29 kDa ribonucleoprotein A, chloroplastic4.1e-11684.98Show/hide
Query:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD
        MATL+SAIPIISQY +SSSS S SSSSS+LSF KLPSAIKLRISFSSPLLSLNPT+A+ P  LFLTNP  NR    GGG R CSAVQEVSLEEASE+NQD
Subjt:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQD

Query:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP
        VNQK+KLYIFNLPWSFSVVDIKE FGQCGTV DVE        IIKQKNGRSRGFAFVTMASPDEAQAAI+KF+SQEISGRVI+VEFAKRLKKPPPP+PP
Subjt:  VNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPP

Query:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK
        GPPPGETV+KLYVSNLAWK RS+NLR+FFSENFNPIAARVVFDSPSG+SAGYGFVSFATREEAETALSSLEGK
Subjt:  GPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK

SwissProt top hitse value%identityAlignment
P19683 31 kDa ribonucleoprotein, chloroplastic4.2e-2535.48Show/hide
Query:  EVSLEEASEQNQDVNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEF
        EV  +E  E+ Q+  +  KL++ NLP+      +  LF Q G V   E       VI  +   +SRGF FVTM++ +EA+ A+E +N  +++GR++ V  
Subjt:  EVSLEEASEQNQDVNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEF

Query:  AKRLKKPPPPRPPGPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK
        A R +   P RP  P   E   ++YV N+ W +  + L   FSE+   ++ARVV+D  +GRS G+GFV+ A+  E   A+++L+G+
Subjt:  AKRLKKPPPPRPPGPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK

P19684 33 kDa ribonucleoprotein, chloroplastic4.0e-2330.74Show/hide
Query:  TSSSSSPS--------PSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEE---ASEQNQDVNQ
        T+S+SS S        P  S   LS +   +    +I+ S+ L +  P S++   S+FL+  +    G           VQE   EE   ++E+ +++ +
Subjt:  TSSSSSPS--------PSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEE---ASEQNQDVNQ

Query:  KK-----------KLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEF-----
        K+           +LY+ NLP+S +   + E+F + GTVA+VE       ++  +   RSRGFAFVTM S +EA+ AI  F+  ++ GR ++V F     
Subjt:  KK-----------KLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEF-----

Query:  -AKRLKKPPPPRPPGPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSS-----LEGKVIYL
          +R       R       ++ +KLYV+NL+W + S  LRD F++    ++A+V++D  SGRS G+GF++F++ E   +AL +     LEG+ + L
Subjt:  -AKRLKKPPPPRPPGPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSS-----LEGKVIYL

P49313 30 kDa ribonucleoprotein, chloroplastic2.0e-2231.72Show/hide
Query:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLF---LTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQ
        MA+  S++  +S    +   P P+S ++ LSF  LP +  L +S SSP        + C  S F   +T P  ++      G            +E  E+
Subjt:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLF---LTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQ

Query:  NQDVNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPP
         ++ +   K+++ NL +S     + ELF + G V  VE       VI  +  GRSRGF FVTM+S +E +AA ++FN  E+ GR ++V        PPP 
Subjt:  NQDVNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPP

Query:  R---------------PPGPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEG
        +                 G    ++ N++YV NLAW V    L   FSE    + A+VV+D  SGRS G+GFV++++ EE   A+ SL+G
Subjt:  R---------------PPGPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEG

Q08935 29 kDa ribonucleoprotein A, chloroplastic1.6e-2431.91Show/hide
Query:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEV-SLEEASEQNQ
        MA+  S++  +S    +   P P+S ++ LSF  LP +  L +S SS        S+ C  S F+   + +              +++V   ++  E+ +
Subjt:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEV-SLEEASEQNQ

Query:  DVNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPR-
        + +   K+++ NLP+S     + ELF + G V  VE       VI  +  GRSRGF FVTM+S +E +AA ++FN  E+ GR ++V        PPP + 
Subjt:  DVNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPR-

Query:  --------PPGPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEG
                  G    ++ N++YV NLAW V    L   FSE    + A+VV+D  SGRS G+GFV++++ EE   A+ SL+G
Subjt:  --------PPGPPPGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEG

Q39061 RNA-binding protein CP33, chloroplastic6.5e-2631.68Show/hide
Query:  EVSLEEASEQNQDVNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEF
        E  +EE  +  Q   ++ +LY+ NLP++ +  ++ ++FG+ GTV DV+       ++  +   RSRGF FVTM S +EA+ A++ FNS +I GR ++V F
Subjt:  EVSLEEASEQNQDVNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEF

Query:  AKRLKKPPPPRPPGPPPGE-----------------TVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSL
                   P  P  GE                 + +K+Y  NL W + S  L+D F +    + A+V+++  +GRS G+GF+SF + E  ++AL+++
Subjt:  AKRLKKPPPPRPPGPPPGE-----------------TVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSL

Query:  EG
         G
Subjt:  EG

Arabidopsis top hitse value%identityAlignment
AT2G35410.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.9e-6152.86Show/hide
Query:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRI-SFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQ
        MA L++++ I S ++SSSSS  P   S R S  KL +A+ LRI S  SP+ SL   S          N     S       +  SA +E S EE +E+ Q
Subjt:  MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRI-SFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQ

Query:  DVNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRP
        + N K+KL++FNLPWS SV DI ELFGQCGTV +VE        II+QK+G++RGFAFVTMAS +EAQAAI+KF++ ++SGR+I V FA+R KKP P  P
Subjt:  DVNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRP

Query:  ---PGPPPGETVNKLYVSNLAWKVRSSNLRDFF-SENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKVI
           P P PG+T +KLYVSNLAWK RS++LR+ F + +FNP++ARVVF  P GRS+GYGFVSFATREEAE A++ L GK I
Subjt:  ---PGPPPGETVNKLYVSNLAWKVRSSNLRDFF-SENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKVI

AT3G52380.1 chloroplast RNA-binding protein 334.6e-2731.68Show/hide
Query:  EVSLEEASEQNQDVNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEF
        E  +EE  +  Q   ++ +LY+ NLP++ +  ++ ++FG+ GTV DV+       ++  +   RSRGF FVTM S +EA+ A++ FNS +I GR ++V F
Subjt:  EVSLEEASEQNQDVNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEF

Query:  AKRLKKPPPPRPPGPPPGE-----------------TVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSL
                   P  P  GE                 + +K+Y  NL W + S  L+D F +    + A+V+++  +GRS G+GF+SF + E  ++AL+++
Subjt:  AKRLKKPPPPRPPGPPPGE-----------------TVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSL

Query:  EG
         G
Subjt:  EG

AT4G09040.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.8e-2633.61Show/hide
Query:  ISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQN------QDVNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEV
        ++F++  LSL+ T ++C      T P    +          +  QE  LE +S  +      ++   K +L   N+PW+ +  DI+ LF + G+V D+E+
Subjt:  ISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQN------QDVNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEV

Query:  SSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPPGPPPGETVNKLYVSNLAWKVRSSNLRDFF-SENFNP
        S          K  R+RG  F+ MASP+EA  A++   S E  GR ++V++AK  KK        P P  T N L+V+NLA++ R+ +L++FF ++  N 
Subjt:  SSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPPGPPPGETVNKLYVSNLAWKVRSSNLRDFF-SENFNP

Query:  IAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK
        ++  V+F     RS+GYGFVSF T+++AE AL   +GK
Subjt:  IAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK

AT4G09040.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-2639.18Show/hide
Query:  KKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPPGPP
        K +L   N+PW+ +  DI+ LF + G+V D+E+S          K  R+RG  F+ MASP+EA  A++   S E  GR ++V++AK  KK        P 
Subjt:  KKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPPGPP

Query:  PGETVNKLYVSNLAWKVRSSNLRDFF-SENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK
        P  T N L+V+NLA++ R+ +L++FF ++  N ++  V+F     RS+GYGFVSF T+++AE AL   +GK
Subjt:  PGETVNKLYVSNLAWKVRSSNLRDFF-SENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK

AT5G50250.1 chloroplast RNA-binding protein 31B2.6e-2232.03Show/hide
Query:  ATLDSAIPIISQYTSSSSS----PS----PSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEE
        + L  ++ +++   SSSS+    PS     SS S R +F+     + L +S  S   +L  +S +       +N +    G  G  G     V E    E
Subjt:  ATLDSAIPIISQYTSSSSS----PS----PSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEE

Query:  ASEQNQDVNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKK
              +  ++ KL++ NLP+      +  LF Q GTV         S VI  +   +SRGF FVTM++ +EA+ A+EKFNS E++GR + V  A     
Subjt:  ASEQNQDVNQKKKLYIFNLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKK

Query:  PPPPRPPGPP-PGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK
        P   RP   P   +   ++YV NL W V S  L   FSE+   + ARVV D  +GRS G+GFV  +   E   A+++L+G+
Subjt:  PPPPRPPGPP-PGETVNKLYVSNLAWKVRSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGCTCGATTCTGCAATTCCAATAATCTCTCAATACACTTCTTCTTCTTCTTCTCCATCGCCTTCTTCTTCTTCCTCAAGATTATCCTTCACTAAACTTCCCTC
CGCCATTAAGCTTCGCATTTCCTTCTCCTCCCCTCTCCTTTCGCTCAATCCCACATCCGCCATTTGCCCTCCTTCCCTCTTTCTCACCAATCCATCGCCAAATCGCAGCG
GCGGCGGCGGCGGCGGCGGCCGATTGTGCTCTGCAGTTCAGGAGGTTAGTTTAGAGGAAGCTTCAGAGCAGAATCAGGATGTGAATCAGAAAAAAAAGTTATACATCTTC
AATTTACCTTGGTCTTTCTCTGTCGTCGACATTAAGGAGCTCTTTGGACAATGCGGAACTGTCGCTGATGTTGAGGTTTCTTCTTCTTCTTCATCTGTTATTATAAAGCA
GAAAAATGGAAGGAGCAGGGGATTTGCCTTTGTGACTATGGCTTCACCAGATGAAGCTCAAGCTGCTATTGAGAAATTCAACTCTCAAGAAATATCAGGAAGAGTAATAC
AGGTAGAGTTTGCAAAGAGATTGAAGAAACCTCCTCCTCCAAGGCCTCCAGGTCCCCCTCCTGGGGAGACAGTGAATAAACTTTATGTATCAAATCTTGCATGGAAAGTG
AGATCCAGCAATCTCAGAGATTTCTTTTCTGAAAACTTTAATCCAATTGCAGCCAGGGTTGTGTTTGATAGCCCCTCTGGAAGATCTGCTGGATATGGCTTCGTTTCTTT
CGCTACTCGAGAGGAAGCAGAAACTGCACTTTCTTCATTGGAGGGGAAGGTAATTTACTTGCTGAGATCCTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACGCTCGATTCTGCAATTCCAATAATCTCTCAATACACTTCTTCTTCTTCTTCTCCATCGCCTTCTTCTTCTTCCTCAAGATTATCCTTCACTAAACTTCCCTC
CGCCATTAAGCTTCGCATTTCCTTCTCCTCCCCTCTCCTTTCGCTCAATCCCACATCCGCCATTTGCCCTCCTTCCCTCTTTCTCACCAATCCATCGCCAAATCGCAGCG
GCGGCGGCGGCGGCGGCGGCCGATTGTGCTCTGCAGTTCAGGAGGTTAGTTTAGAGGAAGCTTCAGAGCAGAATCAGGATGTGAATCAGAAAAAAAAGTTATACATCTTC
AATTTACCTTGGTCTTTCTCTGTCGTCGACATTAAGGAGCTCTTTGGACAATGCGGAACTGTCGCTGATGTTGAGGTTTCTTCTTCTTCTTCATCTGTTATTATAAAGCA
GAAAAATGGAAGGAGCAGGGGATTTGCCTTTGTGACTATGGCTTCACCAGATGAAGCTCAAGCTGCTATTGAGAAATTCAACTCTCAAGAAATATCAGGAAGAGTAATAC
AGGTAGAGTTTGCAAAGAGATTGAAGAAACCTCCTCCTCCAAGGCCTCCAGGTCCCCCTCCTGGGGAGACAGTGAATAAACTTTATGTATCAAATCTTGCATGGAAAGTG
AGATCCAGCAATCTCAGAGATTTCTTTTCTGAAAACTTTAATCCAATTGCAGCCAGGGTTGTGTTTGATAGCCCCTCTGGAAGATCTGCTGGATATGGCTTCGTTTCTTT
CGCTACTCGAGAGGAAGCAGAAACTGCACTTTCTTCATTGGAGGGGAAGGTAATTTACTTGCTGAGATCCTGTTGA
Protein sequenceShow/hide protein sequence
MATLDSAIPIISQYTSSSSSPSPSSSSSRLSFTKLPSAIKLRISFSSPLLSLNPTSAICPPSLFLTNPSPNRSGGGGGGGRLCSAVQEVSLEEASEQNQDVNQKKKLYIF
NLPWSFSVVDIKELFGQCGTVADVEVSSSSSSVIIKQKNGRSRGFAFVTMASPDEAQAAIEKFNSQEISGRVIQVEFAKRLKKPPPPRPPGPPPGETVNKLYVSNLAWKV
RSSNLRDFFSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKVIYLLRSC