CuGenDBv2

Gene ID	Spg021310
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CS domain-containing protein
Genome location	scaffold6:47128023..47143050
RNA-Seq Expression	Spg021310
Synteny	Spg021310
Gene Ontology terms	GO:0016310 - phosphorylation (biological process) GO:0016301 - kinase activity (molecular function)
InterPro domains	IPR026960 - Reverse transcriptase zinc-binding domain IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7015768.1 putative inactive shikimate kinase like 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

1.8e-67

74.87

Show/hide

Query:  RMLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHS
        RMLAEGS++VAQAENAVLESLSSHVR VVATLGG+PGAA RTDTWRHLYAGFT+WLSQTEAT DESAAKEEARRHMQDS++AYSNAEVVVKLQGWD+AHS
Subjt:  RMLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHS

Query:  KAVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSSS
        KAVAQAALSALKQL+LSDKNLP                              DKKSLYIRLGCRGDWPNIKPPGWDPA+D+ T ++S
Subjt:  KAVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSSS

XP_022923578.1 probable inactive shikimate kinase like 2, chloroplastic [Cucurbita moschata]

3.9e-67

75.68

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Query:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK
        MLAEGSD+VAQAENAVLESLSSHVR VVATLGG+ GAAGRTDTWRHLYAGFTVWLSQTEAT DESAAKEEARRHMQDS++AYSNAEVVVKLQGWD+AHSK
Subjt:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK

Query:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSS
        AVAQAALSALKQL+LSDKNLP                              DKKSLYIRLGCRGDWPNIKPPGWDPA+D+ T ++
Subjt:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSS

XP_022965359.1 probable inactive shikimate kinase like 2, chloroplastic [Cucurbita maxima]

1.2e-68

76.88

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Query:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK
        MLAEGSD+VAQAENAVLESLSSHVR VVATLGG+PGAAGRTDTWRHLYAGFTVWLSQTEAT DESAAKEEARRHMQDS++AYSNAEVVVKLQGWD+AHSK
Subjt:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK

Query:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSSS
        AVAQAALSALKQLILSDKNLP                              DKKSLYIRLGCRGDWPNIKPPGWDPA+D+ T ++S
Subjt:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSSS

XP_023553268.1 probable inactive shikimate kinase like 2, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]

1.6e-68

76.88

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Query:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK
        MLAEGSD+VAQAENAVLESLSSHVR VVATLGG+PGAAGRTDTWRHLYAGFTVWLSQTEAT DESAAKEEARRHMQDS++AYSNAEVVVKLQGWD+AHSK
Subjt:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK

Query:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSSS
        AVAQAALSALKQLILSDKNLP                              DKKSLYIRLGCRGDWPNIKPPGWDPA+D+ T  +S
Subjt:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSSS

XP_038892435.1 probable inactive shikimate kinase like 2, chloroplastic [Benincasa hispida]

9.4e-69

77.96

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Query:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK
        MLAEG ++VAQAEN VLESLSSHVRAVVATLGGQ GAAGRTDTWRHLYAGFTVWLSQTEAT DESAAKEEARRHMQDS+LAYSNAEVVVKLQGWD+AHSK
Subjt:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK

Query:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSSS
        AVAQAALSALKQLILSDKNLP                              DKKSLYIRLGCRGDWPNIKPPGWDPA+D+KTN+SS
Subjt:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L3V6 CS domain-containing protein

5.2e-65

74.19

Show/hide

Query:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK
        MLAEGSD+VAQ EN V+ESLSSHVRAVVATLGG+ GAAGRTDTWRHLYAGFTVWLSQTEAT DESAAKEEA+RHMQDS+LAYSNAEVVVKLQGWD+AHSK
Subjt:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK

Query:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSSS
         VAQAALSALKQLILSDK+LP                              DKKSLYIRLGCRGDWPNIKPPGWDPA+D   N+ S
Subjt:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSSS

A0A1S3BL22 probable inactive shikimate kinase like 2, chloroplastic isoform X1

6.1e-66

74.73

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Query:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK
        MLAEGS++VAQAEN V+ESLSSHVRAVVATLGG+ GAAGRTDTWRHLYAGFTVWLSQTEAT DESAAKEEA+RHMQDS+LAYSNAEVVVKLQGWD+AHSK
Subjt:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK

Query:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSSS
         VAQAALSALKQLILSDKNLP                              DKKSLYIRLGCRGDWPNIKPPGWDPA+D  TN+ +
Subjt:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSSS

A0A5A7UCT5 Putative inactive shikimate kinase like 2

6.1e-66

74.73

Show/hide

Query:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK
        MLAEGS++VAQAEN V+ESLSSHVRAVVATLGG+ GAAGRTDTWRHLYAGFTVWLSQTEAT DESAAKEEA+RHMQDS+LAYSNAEVVVKLQGWD+AHSK
Subjt:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK

Query:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSSS
         VAQAALSALKQLILSDKNLP                              DKKSLYIRLGCRGDWPNIKPPGWDPA+D  TN+ +
Subjt:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSSS

A0A6J1EA09 probable inactive shikimate kinase like 2, chloroplastic

1.9e-67

75.68

Show/hide

Query:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK
        MLAEGSD+VAQAENAVLESLSSHVR VVATLGG+ GAAGRTDTWRHLYAGFTVWLSQTEAT DESAAKEEARRHMQDS++AYSNAEVVVKLQGWD+AHSK
Subjt:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK

Query:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSS
        AVAQAALSALKQL+LSDKNLP                              DKKSLYIRLGCRGDWPNIKPPGWDPA+D+ T ++
Subjt:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSS

A0A6J1HQS7 probable inactive shikimate kinase like 2, chloroplastic

5.9e-69

76.88

Show/hide

Query:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK
        MLAEGSD+VAQAENAVLESLSSHVR VVATLGG+PGAAGRTDTWRHLYAGFTVWLSQTEAT DESAAKEEARRHMQDS++AYSNAEVVVKLQGWD+AHSK
Subjt:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK

Query:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSSS
        AVAQAALSALKQLILSDKNLP                              DKKSLYIRLGCRGDWPNIKPPGWDPA+D+ T ++S
Subjt:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSSS

SwissProt top hits

e value

%identity

Alignment

O82290 Probable inactive shikimate kinase like 2, chloroplastic

3.8e-57

64.8

Show/hide

Query:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK
        +LAEG DSVA+AE++VLESLSSHVR VV+TLGG+ GAAGR D WRHLY+GFTVW+SQTEAT DE +AKEEARR  Q+  + YSNA+VVVKLQGWD  H+K
Subjt:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK

Query:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAAD
        +VAQA+LSALKQLI+SDK LPG                              KKSLYIRLGCRGDWPNIKPPGWDP++D
Subjt:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAAD

Arabidopsis top hits

e value

%identity

Alignment

AT2G35500.1 shikimate kinase like 2

2.7e-58

64.8

Show/hide

Query:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK
        +LAEG DSVA+AE++VLESLSSHVR VV+TLGG+ GAAGR D WRHLY+GFTVW+SQTEAT DE +AKEEARR  Q+  + YSNA+VVVKLQGWD  H+K
Subjt:  MLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSK

Query:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAAD
        +VAQA+LSALKQLI+SDK LPG                              KKSLYIRLGCRGDWPNIKPPGWDP++D
Subjt:  AVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAAD

AT3G09510.1 Ribonuclease H-like superfamily protein

1.7e-04

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Query:  ASSSPTTGTTLYSRLWKGPMPKKVKFFIWELNHASINTADVIQKRYPGNSLSPSCCVMCHKASETQAHLFSSCDFASEFW
        A + P     L +R+W  P+  K+K F+W     ++ T + +  R  G  + PS C  CH+ +E+  H   +C FA+  W
Subjt:  ASSSPTTGTTLYSRLWKGPMPKKVKFFIWELNHASINTADVIQKRYPGNSLSPSCCVMCHKASETQAHLFSSCDFASEFW

Sequences

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CDS sequence

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ATGACTAAATACCCATCTCTGTATAACTTATCTCTAAAAAAAGAAGCATTCATTGCTGATCTATGGAATCCTAGTAATGGGTCTTGGAACCTTCATTTGAGGCGAAATCT
CAATGAGAATGAAATCCTAGAATGGGCTATTTTATCTCATCATCTTACCAACTTCTCCATCAAAGACGAGGAAGACTCATGGAGGTGGCAGCTCGGAAACATTGACAGCT
TCACCACGGGATCTCTCACGAAAAAATTGGCTTCCTCTTCTCCCACAACCGGAACAACATTATATAGTAGACTGTGGAAAGGTCCTATGCCGAAAAAGGTTAAATTCTTC
ATATGGGAACTCAATCATGCTAGCATCAACACCGCAGACGTCATTCAGAAAAGATATCCTGGAAATAGTCTTTCTCCTAGCTGCTGTGTCATGTGTCACAAAGCTAGCGA
GACCCAAGCTCATCTATTCAGTAGCTGCGATTTTGCATCAGAATTTTGGTCTCATCTCCAGCATGCTTTTGGGTGGCTTTTTGCTCGTCCGGGTGACATCTACACCCTTC
TCTCTTTATCTGTTTGTGGATCTCCATTTACAAAAGATAAAAAGCTGATATGGCAGATTTTTTTGTATGCTTTCCTATGGAATCTTTGGCTGGAAAGAATCGCTAGATCT
CCTAATTTCGGGGATATGGTGCTAGGGAGCACTTGTTTTATTCCTTTTGCCGAAGTCTTGGGGATGATTTTAGCAAAGCTATTGGCAAGGATGCTTGCTGAAGGTTCTGA
TTCTGTAGCACAAGCAGAAAACGCTGTATTAGAAAGTTTAAGTAGCCATGTCCGTGCTGTTGTTGCGACACTAGGAGGTCAGCCGGGAGCTGCAGGAAGAACTGATACTT
GGAGACATCTTTACGCTGGATTCACTGTCTGGCTTTCTCAAACTGAGGCTACGGCAGATGAAAGTGCAGCTAAGGAAGAAGCTAGGAGACATATGCAAGACAGTAGACTA
GCCTACTCAAATGCAGAAGTTGTAGTAAAGCTTCAGGGTTGGGATAATGCTCATTCCAAGGCGGTGGCTCAGGCAGCATTGAGTGCCCTTAAACAACTTATTCTGTCAGA
CAAAAACCTTCCAGGTATTCTTTGTGACATAGCAATTTCGAACTCAATTCTTATAGCAAAATTTTTGTTTCAATTGAGCAATTTCCTCTGCCATGTTGTTGTAGACAAGA
AAAGTCTTTACATCCGATTGGGATGTCGCGGGGACTGGCCAAACATCAAACCTCCTGGTTGGGATCCTGCAGCCGATAAAAAAACAAACAGCAGCAGTATCATCTAA

mRNA sequence

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Protein sequence

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MTKYPSLYNLSLKKEAFIADLWNPSNGSWNLHLRRNLNENEILEWAILSHHLTNFSIKDEEDSWRWQLGNIDSFTTGSLTKKLASSSPTTGTTLYSRLWKGPMPKKVKFF
IWELNHASINTADVIQKRYPGNSLSPSCCVMCHKASETQAHLFSSCDFASEFWSHLQHAFGWLFARPGDIYTLLSLSVCGSPFTKDKKLIWQIFLYAFLWNLWLERIARS
PNFGDMVLGSTCFIPFAEVLGMILAKLLARMLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATADESAAKEEARRHMQDSRL
AYSNAEVVVKLQGWDNAHSKAVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFQLSNFLCHVVVDKKSLYIRLGCRGDWPNIKPPGWDPAADKKTNSSSII

Spg021310 (gene) of Sponge gourd (cylindrica) v1 genome