; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg021328 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021328
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncold shock domain-containing protein 3
Genome locationscaffold6:47830725..47832116
RNA-Seq ExpressionSpg021328
SyntenySpg021328
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR002059 - Cold-shock protein, DNA-binding
IPR011129 - Cold shock domain
IPR012340 - Nucleic acid-binding, OB-fold
IPR019844 - Cold-shock (CSD) domain
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146143.1 cold shock domain-containing protein 3 [Cucumis sativus]1.4e-10097.07Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGR GGGGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG

Query:  GYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNS--GGGGGGSGGGACYNCGGFGHLARDCNR
        GYGFGGWRGGDRRNG+SGAGGGGCYQCGEQGHLARDCTR SNRGGGGGGGGGCFTCGEVGHLARDCPRGNS  GGGGGG GGGACYNCGGFGHLARDCNR
Subjt:  GYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNS--GGGGGGSGGGACYNCGGFGHLARDCNR

Query:  GGAGG
        GGAGG
Subjt:  GGAGG

XP_008448549.1 PREDICTED: cold shock domain-containing protein 3 [Cucumis melo]1.3e-9896.14Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRG--GGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGG GGRG  GGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRG--GGGG

Query:  GGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNR-GGGGGGGGGCFTCGEVGHLARDCPRGNS-GGGGGGSGGGACYNCGGFGHLARDC
        GGGYGFGGWRGGDRRNG+SG GGGGCYQCGEQGHLARDCTR SNR GGGGGGGGGCFTCGEVGHLARDCPRGNS GGGGGGSGGGACYNCGGFGHLARDC
Subjt:  GGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNR-GGGGGGGGGCFTCGEVGHLARDCPRGNS-GGGGGGSGGGACYNCGGFGHLARDC

Query:  NRGGAGG
        NRGGAGG
Subjt:  NRGGAGG

XP_022965328.1 cold shock domain-containing protein 3-like [Cucurbita maxima]3.8e-9896.55Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNF GGGGGRGGR  GGGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG

Query:  GYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGSGGGACYNCGGFGHLARDCNRGG
        GYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNS   GGG+GGGACYNCGGFGHLARDCNRGG
Subjt:  GYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGSGGGACYNCGGFGHLARDCNRGG

Query:  AGG
        AGG
Subjt:  AGG

XP_023551806.1 cold shock domain-containing protein 3-like [Cucurbita pepo subsp. pepo]5.3e-10097.54Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNF GGGGGRGGR  GGGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG

Query:  GYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGSGGGACYNCGGFGHLARDCNRGG
        GYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGG GGGGGGCFTCGEVGHLARDCPRGNSGGGGGG+GGGACYNCGGFGHLARDCNRGG
Subjt:  GYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGSGGGACYNCGGFGHLARDCNRGG

Query:  AGG
        AGG
Subjt:  AGG

XP_038876618.1 cold shock domain-containing protein 3 [Benincasa hispida]4.9e-9896.1Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNF GGGGGRGGR GGGGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG

Query:  GYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGSGG--GACYNCGGFGHLARDCNR
        GYGFGGWRGGDRRNG+SGAGGG CYQCGEQGHLARDCTRASNR GGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG GG  GACYNCGGFGHLARDCNR
Subjt:  GYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGSGG--GACYNCGGFGHLARDCNR

Query:  GGAGG
        GGAGG
Subjt:  GGAGG

TrEMBL top hitse value%identityAlignment
A0A0A0L4X7 Uncharacterized protein6.7e-10197.07Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGR GGGGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG

Query:  GYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNS--GGGGGGSGGGACYNCGGFGHLARDCNR
        GYGFGGWRGGDRRNG+SGAGGGGCYQCGEQGHLARDCTR SNRGGGGGGGGGCFTCGEVGHLARDCPRGNS  GGGGGG GGGACYNCGGFGHLARDCNR
Subjt:  GYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNS--GGGGGGSGGGACYNCGGFGHLARDCNR

Query:  GGAGG
        GGAGG
Subjt:  GGAGG

A0A1S3BKK1 cold shock domain-containing protein 36.3e-9996.14Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRG--GGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGG GGRG  GGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRG--GGGG

Query:  GGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNR-GGGGGGGGGCFTCGEVGHLARDCPRGNS-GGGGGGSGGGACYNCGGFGHLARDC
        GGGYGFGGWRGGDRRNG+SG GGGGCYQCGEQGHLARDCTR SNR GGGGGGGGGCFTCGEVGHLARDCPRGNS GGGGGGSGGGACYNCGGFGHLARDC
Subjt:  GGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNR-GGGGGGGGGCFTCGEVGHLARDCPRGNS-GGGGGGSGGGACYNCGGFGHLARDC

Query:  NRGGAGG
        NRGGAGG
Subjt:  NRGGAGG

A0A5D3CJR2 Cold shock domain-containing protein 36.3e-9996.14Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRG--GGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGG GGRG  GGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRG--GGGG

Query:  GGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNR-GGGGGGGGGCFTCGEVGHLARDCPRGNS-GGGGGGSGGGACYNCGGFGHLARDC
        GGGYGFGGWRGGDRRNG+SG GGGGCYQCGEQGHLARDCTR SNR GGGGGGGGGCFTCGEVGHLARDCPRGNS GGGGGGSGGGACYNCGGFGHLARDC
Subjt:  GGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNR-GGGGGGGGGCFTCGEVGHLARDCPRGNS-GGGGGGSGGGACYNCGGFGHLARDC

Query:  NRGGAGG
        NRGGAGG
Subjt:  NRGGAGG

A0A6J1HNK3 cold shock domain-containing protein 3-like1.8e-9896.55Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNF GGGGGRGGR  GGGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGG

Query:  GYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGSGGGACYNCGGFGHLARDCNRGG
        GYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNS   GGG+GGGACYNCGGFGHLARDCNRGG
Subjt:  GYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGSGGGACYNCGGFGHLARDCNRGG

Query:  AGG
        AGG
Subjt:  AGG

E5RDD6 Cold-shock DNA-binding family protein6.3e-9996.14Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRG--GGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGG GGRG  GGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRG--GGGG

Query:  GGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNR-GGGGGGGGGCFTCGEVGHLARDCPRGNS-GGGGGGSGGGACYNCGGFGHLARDC
        GGGYGFGGWRGGDRRNG+SG GGGGCYQCGEQGHLARDCTR SNR GGGGGGGGGCFTCGEVGHLARDCPRGNS GGGGGGSGGGACYNCGGFGHLARDC
Subjt:  GGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNR-GGGGGGGGGCFTCGEVGHLARDCPRGNS-GGGGGGSGGGACYNCGGFGHLARDC

Query:  NRGGAGG
        NRGGAGG
Subjt:  NRGGAGG

SwissProt top hitse value%identityAlignment
O65639 Cold shock protein 13.9e-3749.15Show/hide
Query:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGG--------
        R TG V WFN SKG+GFI PD    +LFVHQSSI S+GYRSL VGD VEF I  G DGK+KA+ V A  G S  + +N  G G  RGG G G        
Subjt:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGG--------

Query:  --------GGGGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASN---RGGGGGGGGGCFTCGEVGHLARDCPRGNSGGG---GGGSGGG-
                GGGGG       GG+RR+     GG GCY CG+ GH ARDCT A N   RG   GG  GC+TCG+VGH+ARDC + + G G   G   GG  
Subjt:  --------GGGGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASN---RGGGGGGGGGCFTCGEVGHLARDCPRGNSGGG---GGGSGGG-

Query:  ACYNCGGFGHLARDCN--------RGGAGGMFWC
         CY CG  GH ARDC         R G GG   C
Subjt:  ACYNCGGFGHLARDCN--------RGGAGGMFWC

P27484 Glycine-rich protein 23.2e-3953.74Show/hide
Query:  MAEE---RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGG
        MAEE   R  G V+WF+D KGFGFI PD  G DLFVHQS I+S+G+RSL  G+ VEF++  G DG++KA++V   DG++       GGGGGGRGG G GG
Subjt:  MAEE---RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGG

Query:  GGGGYGFGGWRGGDR--RNGSSGAGGGGCYQCGEQ--GHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPR-------GNSGGGGGGSGGGACYNC
        G GGYG GG RGG R    G  G GGGG Y  G +  G            GGG GGG GCF CGE GH ARDC +       G  GGGGGG GGG CY C
Subjt:  GGGGYGFGGWRGGDR--RNGSSGAGGGGCYQCGEQ--GHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPR-------GNSGGGGGGSGGGACYNC

Query:  GGFGHLARDCNRGG
        G  GH AR+C  GG
Subjt:  GGFGHLARDCNRGG

Q38896 Cold shock domain-containing protein 42.6e-3350.25Show/hide
Query:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGG-GGGY
        +R  G V+WF+  KGFGFI P   G DLFVHQSSI+S+G+RSL   + VEF +   + G+ KAIEV   DG+        GG  GGRGG GGGGG GGG 
Subjt:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGG-GGGY

Query:  GFGGWRGGDRRNGSSGAGGGG----CYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGSGGGACYNCGGFGHLARDCNR
        G G + GG    GS G GGGG    C++CGE GH+AR+C++    G  GGGGGG +              G+ GGGGGG GG +CY+CG  GH ARDC  
Subjt:  GFGGWRGGDRRNGSSGAGGGG----CYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGSGGGACYNCGGFGHLARDCNR

Query:  GGA
        GGA
Subjt:  GGA

Q41188 Cold shock protein 25.8e-3350Show/hide
Query:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGS--SGNRRDNFGGGGGGRGGRGGGGGGGG
        ER  G V+WF+  KGFGFI PD  G DLFVHQSSI+S+G+RSL   + VEF++   ++ + KAI+V   DG+   GN      GG GG GG  GGG G G
Subjt:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGS--SGNRRDNFGGGGGGRGGRGGGGGGGG

Query:  YGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRAS---NRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGSGGGACYNCGGFGHLARDCNR
         G+GG  GG    G  G GG  CY+CGE GH+ARDC+        GGGG GGGG +  G  G+          GG GGG GGG+CY+CG  GH ARDC  
Subjt:  YGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRAS---NRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGSGGGACYNCGGFGHLARDCNR

Query:  GG
        GG
Subjt:  GG

Q94C69 Cold shock domain-containing protein 38.9e-4253.7Show/hide
Query:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGG---------
        R  G V WF+D KG+GFI PD  G +LFVHQSSI SDG+RSL +G+ VE++IA G DGK+KAIEV A  G S N+++N   G GG     G         
Subjt:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGG---------

Query:  GGGGGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRA--SNRGGGGGGGGGCFTCGEVGHLARDCPRGN-----SGGGGGGSGGGACYNCGG
         GG GG  FGG  GG RR+G    G G CY CG+ GH ARDC ++   N GGGGGGG  C++CGEVGHLA+DC  G+      GGGG GSGG  CY CGG
Subjt:  GGGGGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRA--SNRGGGGGGGGGCFTCGEVGHLARDCPRGN-----SGGGGGGSGGGACYNCGG

Query:  FGHLARDCNRGGAGGM
         GH ARDC + G G +
Subjt:  FGHLARDCNRGGAGGM

Arabidopsis top hitse value%identityAlignment
AT2G17870.1 cold shock domain protein 36.3e-4353.7Show/hide
Query:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGG---------
        R  G V WF+D KG+GFI PD  G +LFVHQSSI SDG+RSL +G+ VE++IA G DGK+KAIEV A  G S N+++N   G GG     G         
Subjt:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGG---------

Query:  GGGGGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRA--SNRGGGGGGGGGCFTCGEVGHLARDCPRGN-----SGGGGGGSGGGACYNCGG
         GG GG  FGG  GG RR+G    G G CY CG+ GH ARDC ++   N GGGGGGG  C++CGEVGHLA+DC  G+      GGGG GSGG  CY CGG
Subjt:  GGGGGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRA--SNRGGGGGGGGGCFTCGEVGHLARDCPRGN-----SGGGGGGSGGGACYNCGG

Query:  FGHLARDCNRGGAGGM
         GH ARDC + G G +
Subjt:  FGHLARDCNRGGAGGM

AT2G21060.1 glycine-rich protein 2B1.8e-3450.25Show/hide
Query:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGG-GGGY
        +R  G V+WF+  KGFGFI P   G DLFVHQSSI+S+G+RSL   + VEF +   + G+ KAIEV   DG+        GG  GGRGG GGGGG GGG 
Subjt:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGG-GGGY

Query:  GFGGWRGGDRRNGSSGAGGGG----CYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGSGGGACYNCGGFGHLARDCNR
        G G + GG    GS G GGGG    C++CGE GH+AR+C++    G  GGGGGG +              G+ GGGGGG GG +CY+CG  GH ARDC  
Subjt:  GFGGWRGGDRRNGSSGAGGGG----CYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGSGGGACYNCGGFGHLARDCNR

Query:  GGA
        GGA
Subjt:  GGA

AT4G36020.1 cold shock domain protein 12.7e-3849.15Show/hide
Query:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGG--------
        R TG V WFN SKG+GFI PD    +LFVHQSSI S+GYRSL VGD VEF I  G DGK+KA+ V A  G S  + +N  G G  RGG G G        
Subjt:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGG--------

Query:  --------GGGGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASN---RGGGGGGGGGCFTCGEVGHLARDCPRGNSGGG---GGGSGGG-
                GGGGG       GG+RR+     GG GCY CG+ GH ARDCT A N   RG   GG  GC+TCG+VGH+ARDC + + G G   G   GG  
Subjt:  --------GGGGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASN---RGGGGGGGGGCFTCGEVGHLARDCPRGNSGGG---GGGSGGG-

Query:  ACYNCGGFGHLARDCN--------RGGAGGMFWC
         CY CG  GH ARDC         R G GG   C
Subjt:  ACYNCGGFGHLARDCN--------RGGAGGMFWC

AT4G38680.1 glycine rich protein 24.1e-3450Show/hide
Query:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGS--SGNRRDNFGGGGGGRGGRGGGGGGGG
        ER  G V+WF+  KGFGFI PD  G DLFVHQSSI+S+G+RSL   + VEF++   ++ + KAI+V   DG+   GN      GG GG GG  GGG G G
Subjt:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGS--SGNRRDNFGGGGGGRGGRGGGGGGGG

Query:  YGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRAS---NRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGSGGGACYNCGGFGHLARDCNR
         G+GG  GG    G  G GG  CY+CGE GH+ARDC+        GGGG GGGG +  G  G+          GG GGG GGG+CY+CG  GH ARDC  
Subjt:  YGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRAS---NRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGSGGGACYNCGGFGHLARDCNR

Query:  GG
        GG
Subjt:  GG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAGAGAGATTGACTGGTGTGGTTCAGTGGTTCAACGATTCCAAAGGGTTCGGCTTCATCAAGCCAGATGTTGAAGGTCCGGATCTGTTCGTTCATCAATCCTC
CATTAAATCCGATGGCTACCGGAGCCTCGTCGTCGGAGATCATGTCGAGTTCCAGATCGCCCCTGGCGATGATGGGAAATCCAAGGCCATTGAGGTCGTTGCGCTCGATG
GATCTTCGGGAAATCGGAGGGATAACTTCGGTGGTGGTGGTGGTGGAAGGGGTGGCCGCGGCGGCGGCGGCGGTGGTGGTGGTTATGGATTTGGTGGTTGGAGGGGCGGC
GATAGGCGGAATGGGAGCAGTGGAGCCGGTGGGGGTGGGTGTTATCAATGTGGTGAGCAAGGGCATTTGGCTAGAGACTGTACTCGTGCTAGTAACCGCGGCGGCGGAGG
TGGTGGCGGCGGTGGGTGCTTTACTTGCGGGGAAGTTGGTCACTTAGCGAGGGATTGCCCACGAGGAAACAGCGGCGGAGGCGGCGGTGGTTCCGGTGGTGGGGCTTGCT
ATAATTGTGGTGGGTTTGGGCATTTGGCTAGGGATTGCAATAGGGGTGGGGCTGGAGGCATGTTCTGGTGCACTCTGCTCTGTCTTGCTGACCTTCTTAGAACGAACTGT
GTTTTAGAAGGTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAAGAGAGATTGACTGGTGTGGTTCAGTGGTTCAACGATTCCAAAGGGTTCGGCTTCATCAAGCCAGATGTTGAAGGTCCGGATCTGTTCGTTCATCAATCCTC
CATTAAATCCGATGGCTACCGGAGCCTCGTCGTCGGAGATCATGTCGAGTTCCAGATCGCCCCTGGCGATGATGGGAAATCCAAGGCCATTGAGGTCGTTGCGCTCGATG
GATCTTCGGGAAATCGGAGGGATAACTTCGGTGGTGGTGGTGGTGGAAGGGGTGGCCGCGGCGGCGGCGGCGGTGGTGGTGGTTATGGATTTGGTGGTTGGAGGGGCGGC
GATAGGCGGAATGGGAGCAGTGGAGCCGGTGGGGGTGGGTGTTATCAATGTGGTGAGCAAGGGCATTTGGCTAGAGACTGTACTCGTGCTAGTAACCGCGGCGGCGGAGG
TGGTGGCGGCGGTGGGTGCTTTACTTGCGGGGAAGTTGGTCACTTAGCGAGGGATTGCCCACGAGGAAACAGCGGCGGAGGCGGCGGTGGTTCCGGTGGTGGGGCTTGCT
ATAATTGTGGTGGGTTTGGGCATTTGGCTAGGGATTGCAATAGGGGTGGGGCTGGAGGCATGTTCTGGTGCACTCTGCTCTGTCTTGCTGACCTTCTTAGAACGAACTGT
GTTTTAGAAGGTGCTTGA
Protein sequenceShow/hide protein sequence
MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGGYGFGGWRGG
DRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGSGGGACYNCGGFGHLARDCNRGGAGGMFWCTLLCLADLLRTNC
VLEGA