; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg021347 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021347
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRING-H2 finger protein ATL8
Genome locationscaffold6:48439518..48440105
RNA-Seq ExpressionSpg021347
SyntenySpg021347
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596287.1 RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. sororia]3.2e-8585.2Show/hide
Query:  MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGG
        MTRYF ALA NTS  SA+A+A+APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR   G  A NQASANRGLKKKILQSLPKF Y+  GSGG
Subjt:  MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGG

Query:  EGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGH-SEEEHKRREDNNANNTGLGFLP
        E KFAAECAICLAEF++GEEIRQLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG+FPAVVHGG H +EEE KRREDNN NN GLGFLP
Subjt:  EGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGH-SEEEHKRREDNNANNTGLGFLP

KAG7027836.1 RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-7586.75Show/hide
Query:  LESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGGEGKFAAECAICLAEFVEGEEIRQLPQCGHC
        +ESDFVVILAALLCALICMVGLIAVARCAWLRR   G  A NQASANRGLKKKILQSLPKF Y+  GSGGE KFAAECAICLAEF++GEEIRQLPQCGHC
Subjt:  LESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGGEGKFAAECAICLAEFVEGEEIRQLPQCGHC

Query:  FHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGH-SEEEHKRREDNNANNTGLGFLP
        FHVSCVDTWL SHSSCPSCRQILVVARCQKCG+FPAVVHGG H +EEE KRREDNN NN GLGFLP
Subjt:  FHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGH-SEEEHKRREDNNANNTGLGFLP

XP_022933605.1 RING-H2 finger protein ATL8 [Cucurbita moschata]3.2e-8585.2Show/hide
Query:  MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGG
        MTRYF ALA NTS  SA+A+A+APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR   G  A NQASANRGLKKKILQSLPKF Y+  GSGG
Subjt:  MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGG

Query:  EGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHS-EEEHKRREDNNANNTGLGFLP
        E KFAAECAICLAEF++GEEIRQLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG+FPAVVHGG H+ EEE KRREDNN NN GLGFLP
Subjt:  EGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHS-EEEHKRREDNNANNTGLGFLP

XP_022971423.1 RING-H2 finger protein ATL8 [Cucurbita maxima]2.1e-8484.69Show/hide
Query:  MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGG
        MTRY  ALA NTS  SA+A+A+APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR   G  A NQASANRGLKKKILQSLPKF Y+  GSGG
Subjt:  MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGG

Query:  EGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGH-SEEEHKRREDNNANNTGLGFLP
        EGKFAAECAICLAEF++GEEIRQLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG FPAVVHG  H +EEE KRREDNN NN GLGFLP
Subjt:  EGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGH-SEEEHKRREDNNANNTGLGFLP

XP_023539225.1 RING-H2 finger protein ATL8 [Cucurbita pepo subsp. pepo]4.9e-8685.71Show/hide
Query:  MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGG
        MTRYF ALA NTS  SA+A+A+APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR      A NQASANRGLKKKILQSLPKFTY+  GSGG
Subjt:  MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGG

Query:  EGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGH-SEEEHKRREDNNANNTGLGFLP
        EGKFAAECAICLAEF++GEEIRQLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG+FPAVVHGG H +EEE KRREDNN NN GLGFLP
Subjt:  EGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGH-SEEEHKRREDNNANNTGLGFLP

TrEMBL top hitse value%identityAlignment
A0A0A0L622 RING-type domain-containing protein1.3e-7176.77Show/hide
Query:  MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGG
        M+ Y  AL ANTS        SAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR        NQASANRGLKKKILQSLPKF YK+  + G
Subjt:  MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGG

Query:  EGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRRED---NNANNTGLGFLP
        +GK AAECAICLAEF+EGEEIRQLPQCGHCFHVSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPA V GGG    E +  ED   NN NN GLGFLP
Subjt:  EGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRRED---NNANNTGLGFLP

A0A1S3BKT0 RING-H2 finger protein ATL806.7e-7377.44Show/hide
Query:  MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGG
        M+ Y  AL ANTS        SAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR        NQASANRGLKKKILQSLPKF YK+  + G
Subjt:  MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGG

Query:  EGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNANNTGLGFLP
        +GK AAECAICLAEF+EGEEIRQLPQCGHCFHVSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPAVV GG     E +  EDNN +N GLGFLP
Subjt:  EGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNANNTGLGFLP

A0A5D3CJ22 RING-H2 finger protein ATL806.7e-7377.44Show/hide
Query:  MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGG
        M+ Y  AL ANTS        SAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR        NQASANRGLKKKILQSLPKF YK+  + G
Subjt:  MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGG

Query:  EGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNANNTGLGFLP
        +GK AAECAICLAEF+EGEEIRQLPQCGHCFHVSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPAVV GG     E +  EDNN +N GLGFLP
Subjt:  EGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNANNTGLGFLP

A0A6J1F5B4 RING-H2 finger protein ATL81.5e-8585.2Show/hide
Query:  MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGG
        MTRYF ALA NTS  SA+A+A+APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR   G  A NQASANRGLKKKILQSLPKF Y+  GSGG
Subjt:  MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGG

Query:  EGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHS-EEEHKRREDNNANNTGLGFLP
        E KFAAECAICLAEF++GEEIRQLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG+FPAVVHGG H+ EEE KRREDNN NN GLGFLP
Subjt:  EGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHS-EEEHKRREDNNANNTGLGFLP

A0A6J1I6T7 RING-H2 finger protein ATL81.0e-8484.69Show/hide
Query:  MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGG
        MTRY  ALA NTS  SA+A+A+APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR   G  A NQASANRGLKKKILQSLPKF Y+  GSGG
Subjt:  MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGG

Query:  EGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGH-SEEEHKRREDNNANNTGLGFLP
        EGKFAAECAICLAEF++GEEIRQLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG FPAVVHG  H +EEE KRREDNN NN GLGFLP
Subjt:  EGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGH-SEEEHKRREDNNANNTGLGFLP

SwissProt top hitse value%identityAlignment
O22755 Probable E3 ubiquitin-protein ligase ATL444.2e-4051.1Show/hide
Query:  SAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTY----KTLGSGGEGKFAAECAICLA
        +APPP    E +A ESD VVIL+ALLCALIC+ GL AV RCAWLRR  AG    +  S N+GLKKK LQSLP+ T+     T G+  E   + ECAICL 
Subjt:  SAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTY----KTLGSGGEGKFAAECAICLA

Query:  EFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNANNTGLGFLP
        +F +GEEIR LP CGH FHV C+D WL S SSCPSCR+IL   RC +CG            ++ H+ +   +++ T   FLP
Subjt:  EFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNANNTGLGFLP

Q8LC69 RING-H2 finger protein ATL81.8e-4355.06Show/hide
Query:  ASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQ-----ASANRGLKKKILQSLPKFTYKTLGSGGEGKFAAECA
        A++++ A A PP      SD V+ILA LLCAL C++GLIAV+RCAWLRR  +   +        A+AN+GLKKK+L+SLPK TY       E     ECA
Subjt:  ASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQ-----ASANRGLKKKILQSLPKFTYKTLGSGGEGKFAAECA

Query:  ICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNAN
        ICL EF  G+E+R LPQCGH FHVSC+DTWLGSHSSCPSCRQILVV RC KCG  P     G   +   K+RED   N
Subjt:  ICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNAN

Q9LM69 RING-H2 finger protein ATL801.5e-4558.52Show/hide
Query:  ALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAAN----------QASANRGLKKKILQSLPKFTYKTLGSGGEGKFAAECAICLAEFVEGE
        AL SD VVILAALLCALIC++GLIAV+RC WLRR  AG    +           A+AN+GLKKK+LQSLPK T+       E +  AECAICLAEF  G+
Subjt:  ALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAAN----------QASANRGLKKKILQSLPKFTYKTLGSGGEGKFAAECAICLAEFVEGE

Query:  EIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNANNTGLGFLP
        E+R LPQCGH FHV+C+DTWLGSHSSCPSCRQILVVARC KCG  P     G  SE E + R     ++    FLP
Subjt:  EIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNANNTGLGFLP

Q9LZV8 RING-H2 finger protein ATL745.0e-2551.59Show/hide
Query:  ESDFVVILAALLCALICMVGLIAVARCAWLRRAGAG---AAAANQASANRGLKKKILQSLPKFTYKTLGSGGEGKFAAECAICLAEFVEGEEIRQLPQCG
        +++ V+ILAALLCALI  +GL ++ RCA   R G G   +AAA   +   GLKK+ L+  P   Y   GSG     A ECAICL EF +GE +R LP C 
Subjt:  ESDFVVILAALLCALICMVGLIAVARCAWLRRAGAG---AAAANQASANRGLKKKILQSLPKFTYKTLGSGGEGKFAAECAICLAEFVEGEEIRQLPQCG

Query:  HCFHVSCVDTWLGSHSSCPSCRQILV
        H FH+SC+DTWL SHSSCP+CR  L+
Subjt:  HCFHVSCVDTWLGSHSSCPSCRQILV

Q9ZT49 Probable E3 ubiquitin-protein ligase ATL454.7e-3948.24Show/hide
Query:  TSSASASASASAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRR-AGAGAAAANQA-SANRGLKKKILQSLPKFTYKT------------L
        T S+    +AS PPPE + A E+D VVIL+ALLCAL+C+ GL AVARCAWLRR  G   AA  +A   N+GLKKK LQ+LPK TY               
Subjt:  TSSASASASASAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRR-AGAGAAAANQA-SANRGLKKKILQSLPKFTYKT------------L

Query:  GSGGEGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNANNTGLGFLP
         S G+G  + ECAIC+ EF EGEEIR LP C H FHV+C+D WL S SSCPSCR+ILV  +C +CG   +        +  H +      +     FLP
Subjt:  GSGGEGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNANNTGLGFLP

Arabidopsis top hitse value%identityAlignment
AT1G20823.1 RING/U-box superfamily protein1.1e-4658.52Show/hide
Query:  ALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAAN----------QASANRGLKKKILQSLPKFTYKTLGSGGEGKFAAECAICLAEFVEGE
        AL SD VVILAALLCALIC++GLIAV+RC WLRR  AG    +           A+AN+GLKKK+LQSLPK T+       E +  AECAICLAEF  G+
Subjt:  ALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAAN----------QASANRGLKKKILQSLPKFTYKTLGSGGEGKFAAECAICLAEFVEGE

Query:  EIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNANNTGLGFLP
        E+R LPQCGH FHV+C+DTWLGSHSSCPSCRQILVVARC KCG  P     G  SE E + R     ++    FLP
Subjt:  EIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNANNTGLGFLP

AT1G76410.1 RING/U-box superfamily protein1.3e-4455.06Show/hide
Query:  ASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQ-----ASANRGLKKKILQSLPKFTYKTLGSGGEGKFAAECA
        A++++ A A PP      SD V+ILA LLCAL C++GLIAV+RCAWLRR  +   +        A+AN+GLKKK+L+SLPK TY       E     ECA
Subjt:  ASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQ-----ASANRGLKKKILQSLPKFTYKTLGSGGEGKFAAECA

Query:  ICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNAN
        ICL EF  G+E+R LPQCGH FHVSC+DTWLGSHSSCPSCRQILVV RC KCG  P     G   +   K+RED   N
Subjt:  ICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNAN

AT2G17450.1 RING-H2 finger A3A3.0e-4151.1Show/hide
Query:  SAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTY----KTLGSGGEGKFAAECAICLA
        +APPP    E +A ESD VVIL+ALLCALIC+ GL AV RCAWLRR  AG    +  S N+GLKKK LQSLP+ T+     T G+  E   + ECAICL 
Subjt:  SAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTY----KTLGSGGEGKFAAECAICLA

Query:  EFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNANNTGLGFLP
        +F +GEEIR LP CGH FHV C+D WL S SSCPSCR+IL   RC +CG            ++ H+ +   +++ T   FLP
Subjt:  EFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNANNTGLGFLP

AT4G35480.1 RING-H2 finger A3B3.3e-4048.24Show/hide
Query:  TSSASASASASAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRR-AGAGAAAANQA-SANRGLKKKILQSLPKFTYKT------------L
        T S+    +AS PPPE + A E+D VVIL+ALLCAL+C+ GL AVARCAWLRR  G   AA  +A   N+GLKKK LQ+LPK TY               
Subjt:  TSSASASASASAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRR-AGAGAAAANQA-SANRGLKKKILQSLPKFTYKT------------L

Query:  GSGGEGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNANNTGLGFLP
         S G+G  + ECAIC+ EF EGEEIR LP C H FHV+C+D WL S SSCPSCR+ILV  +C +CG   +        +  H +      +     FLP
Subjt:  GSGGEGKFAAECAICLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNANNTGLGFLP

AT5G01880.1 RING/U-box superfamily protein3.6e-2651.59Show/hide
Query:  ESDFVVILAALLCALICMVGLIAVARCAWLRRAGAG---AAAANQASANRGLKKKILQSLPKFTYKTLGSGGEGKFAAECAICLAEFVEGEEIRQLPQCG
        +++ V+ILAALLCALI  +GL ++ RCA   R G G   +AAA   +   GLKK+ L+  P   Y   GSG     A ECAICL EF +GE +R LP C 
Subjt:  ESDFVVILAALLCALICMVGLIAVARCAWLRRAGAG---AAAANQASANRGLKKKILQSLPKFTYKTLGSGGEGKFAAECAICLAEFVEGEEIRQLPQCG

Query:  HCFHVSCVDTWLGSHSSCPSCRQILV
        H FH+SC+DTWL SHSSCP+CR  L+
Subjt:  HCFHVSCVDTWLGSHSSCPSCRQILV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGCTATTTTACGGCTCTCGCGGCTAATACTTCGTCGGCGTCCGCGTCCGCGTCCGCGTCGGCGCCTCCCCCAGAGGCGGTGGCGCTGGAGTCCGACTTCGTTGT
GATTCTCGCGGCGCTGCTCTGTGCCCTAATTTGTATGGTAGGGCTCATAGCGGTGGCTCGGTGCGCCTGGCTCCGGCGGGCCGGTGCCGGTGCTGCTGCAGCTAATCAGG
CGTCTGCGAATAGGGGACTGAAGAAGAAGATCCTGCAGTCTCTCCCGAAATTCACGTACAAAACGTTAGGGTCCGGCGGAGAGGGGAAATTTGCGGCGGAATGTGCGATC
TGCCTGGCGGAGTTCGTGGAGGGGGAGGAGATCCGGCAGCTGCCGCAGTGCGGGCATTGCTTCCACGTAAGCTGCGTAGACACGTGGCTGGGGTCCCACTCGTCCTGCCC
CTCTTGCCGACAGATTCTGGTGGTGGCGAGATGCCAGAAGTGCGGGCAGTTCCCGGCGGTCGTCCACGGCGGCGGTCACAGCGAGGAGGAGCACAAGAGGAGGGAAGATA
ACAATGCTAACAACACGGGTTTGGGGTTTTTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCGCTATTTTACGGCTCTCGCGGCTAATACTTCGTCGGCGTCCGCGTCCGCGTCCGCGTCGGCGCCTCCCCCAGAGGCGGTGGCGCTGGAGTCCGACTTCGTTGT
GATTCTCGCGGCGCTGCTCTGTGCCCTAATTTGTATGGTAGGGCTCATAGCGGTGGCTCGGTGCGCCTGGCTCCGGCGGGCCGGTGCCGGTGCTGCTGCAGCTAATCAGG
CGTCTGCGAATAGGGGACTGAAGAAGAAGATCCTGCAGTCTCTCCCGAAATTCACGTACAAAACGTTAGGGTCCGGCGGAGAGGGGAAATTTGCGGCGGAATGTGCGATC
TGCCTGGCGGAGTTCGTGGAGGGGGAGGAGATCCGGCAGCTGCCGCAGTGCGGGCATTGCTTCCACGTAAGCTGCGTAGACACGTGGCTGGGGTCCCACTCGTCCTGCCC
CTCTTGCCGACAGATTCTGGTGGTGGCGAGATGCCAGAAGTGCGGGCAGTTCCCGGCGGTCGTCCACGGCGGCGGTCACAGCGAGGAGGAGCACAAGAGGAGGGAAGATA
ACAATGCTAACAACACGGGTTTGGGGTTTTTGCCTTGA
Protein sequenceShow/hide protein sequence
MTRYFTALAANTSSASASASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRAGAGAAAANQASANRGLKKKILQSLPKFTYKTLGSGGEGKFAAECAI
CLAEFVEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGGHSEEEHKRREDNNANNTGLGFLP