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Spg021479 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021479
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationscaffold9:6712318..6718261
RNA-Seq ExpressionSpg021479
SyntenySpg021479
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047856.1 hypothetical protein E6C27_scaffold133G001210 [Cucumis melo var. makuwa]2.7e-1137.72Show/hide
Query:  VSFSSVDINRVYQIKASLQPRGNDAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSIMK
        ++F    IN +Y +K +    G+    NP  ++L+EAL+     G +W +  T +  L P +L  E +VWL FIK  +MPT HD+ I +ER+MLLY I+ 
Subjt:  VSFSSVDINRVYQIKASLQPRGNDAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSIMK

Query:  GLEINIGSIIREEI
         + +N+G II E +
Subjt:  GLEINIGSIIREEI

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]2.1e-1137.4Show/hide
Query:  VSFSSVDINRVYQIKASLQPRGN--DAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSI
        V  S+  IN +Y +   +       +AIT P    L   L+ VA  G +W  S     + + S L P   VW HF+K+RL+PTTH  T+  ERV+LLYS+
Subjt:  VSFSSVDINRVYQIKASLQPRGN--DAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSI

Query:  MKGLEINIGSIIREEILSCGRKR
        + G  IN+G II  EI +   ++
Subjt:  MKGLEINIGSIIREEILSCGRKR

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]5.8e-1435.59Show/hide
Query:  FSSVDINRVYQIKASLQPRGNDAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSIMKGL
        +++++ NR  +++     RGN+ + +PS + ++EA +++ R    W  S     SL P D+  +  VW++ +KNRL+PT++DS+I   R M++Y ++KG+
Subjt:  FSSVDINRVYQIKASLQPRGNDAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSIMKGL

Query:  EINIGSIIREEILSCGRK
        E N G +IR EI SC  K
Subjt:  EINIGSIIREEILSCGRK

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]4.9e-1335.09Show/hide
Query:  VSFSSVDINRVYQIKASLQPRGNDAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSIMK
        VSFS+ DIN +YQ+K +    GN  I +P+ + +++AL+++ + G++W  S   V +L    L  E  +W++ +K RL+ TTHD T+  +RVM  Y I++
Subjt:  VSFSSVDINRVYQIKASLQPRGNDAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSIMK

Query:  GLEINIGSIIREEI
         + I++G +I  ++
Subjt:  GLEINIGSIIREEI

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]4.9e-1332.79Show/hide
Query:  MVSFSSVDINRVYQIKASLQPRGNDAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSIM
        +V FS+ DIN +Y++K      GN  I +P  + +++AL+ + + G QW  S   +K+L  S L PE  +W++ +K R++PT+HD T+  +RVM  Y I 
Subjt:  MVSFSSVDINRVYQIKASLQPRGNDAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSIM

Query:  KGLEINIGSIIREEILSCGRKR
         G+ I++  +I  +     +++
Subjt:  KGLEINIGSIIREEILSCGRKR

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)1.1e-1030.97Show/hide
Query:  VSFSSVDINRVYQIKASLQPRGNDAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSIMK
        VS+S   IN V+ +   +    ++ I N + + L   L+ VA  G +W  S     + + S L P   VW HF+K+RL+PTTH  T+  +R++LL+S++ 
Subjt:  VSFSSVDINRVYQIKASLQPRGNDAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSIMK

Query:  GLEINIGSIIREEILSCGRKR---------LDRIEEKLKAYWVYAEERDEATREL
        G  IN+G +I  EI +C  ++         + R+    +A ++  EE+   T E+
Subjt:  GLEINIGSIIREEILSCGRKR---------LDRIEEKLKAYWVYAEERDEATREL

A0A2P5BNT0 Uncharacterized protein (Fragment)1.7e-1134.71Show/hide
Query:  VSFSSVDINRVYQIKASLQPRGNDAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSIMK
        V  S+  IN +Y +   L    ++ + + +   L   L+ VA  G +W  S   V + + S L P   +W HF+K+RL+PTTH   +  ERV+LLYS++ 
Subjt:  VSFSSVDINRVYQIKASLQPRGNDAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSIMK

Query:  GLEINIGSIIREEILSCGRKR
        G  IN+G +I  EI +C  ++
Subjt:  GLEINIGSIIREEILSCGRKR

A0A2P5CPE8 Uncharacterized protein1.0e-1137.4Show/hide
Query:  VSFSSVDINRVYQIKASLQPRGN--DAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSI
        V  S+  IN +Y +   +       +AIT P    L   L+ VA  G +W  S     + + S L P   VW HF+K+RL+PTTH  T+  ERV+LLYS+
Subjt:  VSFSSVDINRVYQIKASLQPRGN--DAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSI

Query:  MKGLEINIGSIIREEILSCGRKR
        + G  IN+G II  EI +   ++
Subjt:  MKGLEINIGSIIREEILSCGRKR

A0A5A7U0U4 Uncharacterized protein1.3e-1137.72Show/hide
Query:  VSFSSVDINRVYQIKASLQPRGNDAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSIMK
        ++F    IN +Y +K +    G+    NP  ++L+EAL+     G +W +  T +  L P +L  E +VWL FIK  +MPT HD+ I +ER+MLLY I+ 
Subjt:  VSFSSVDINRVYQIKASLQPRGNDAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSIMK

Query:  GLEINIGSIIREEI
         + +N+G II E +
Subjt:  GLEINIGSIIREEI

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220072.8e-1435.59Show/hide
Query:  FSSVDINRVYQIKASLQPRGNDAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSIMKGL
        +++++ NR  +++     RGN+ + +PS + ++EA +++ R    W  S     SL P D+  +  VW++ +KNRL+PT++DS+I   R M++Y ++KG+
Subjt:  FSSVDINRVYQIKASLQPRGNDAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSIMKGL

Query:  EINIGSIIREEILSCGRK
        E N G +IR EI SC  K
Subjt:  EINIGSIIREEILSCGRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGTTTCTCTTCGGTTGATATTAACAGGGTTTATCAGATCAAAGCTTCTTTGCAACCGAGAGGGAACGATGCAATCACAAATCCTTCGGCCAAGCATTTAAAAGA
AGCATTGAAAATTGTGGCAAGGAAGGGAGTCCAATGGAAGGAATCTCAGACCAAAGTGAAGTCTCTTGTGCCAAGCGACTTAAAGCCCGAACTAGCAGTATGGCTTCACT
TCATTAAAAATAGATTGATGCCCACCACCCATGATAGTACAATTTTAGTAGAGAGGGTCATGCTTCTCTATAGCATAATGAAAGGGTTGGAGATCAATATTGGCAGCATC
ATTAGGGAGGAGATCCTATCTTGTGGGAGAAAGAGACTGGACCGCATTGAAGAGAAATTGAAAGCATACTGGGTCTATGCAGAGGAAAGAGATGAAGCAACTAGAGAGTT
ATATCTCTCTATCGCCCCAACCATCGCTCCTGTTTCCCTTACTTTCCTCAAACCTTGCTGCCTCGAGAAGAAGAAGAGTCTGAAAATGAAGATGAAGAAGTTGGAGAGAC
TTCCTCAGAGGAGGAATAGGGGACCAAGAAGGGAGGAGAGTGAAGTGCAACCCACTTCCATAGAAGAAGAATCTTCCTTAGAGAGCTTGCTTGAAGATTTTATTGAGGAG
TCTAGAGCCATGAATTTAGAATTAGAAAAATCTATGGAGAGATTCCAGACCCAAAGGGAAGATAAGGAAGTAGGATCCACTTCCATAGAGTGTCTAGTGAGTCATGTGGC
CAGTGATTCATTAGTGCCGATTCAAGAGCCTAATCCTTTCAATTTTGCTGAGTTTGAGCATATAGGGGTGAGCTGTATAGGAATAGAGGAAGAATTGGATAGTTCTAGCA
CCCATCAAGAACAAGTTTGTGAGGAAGAAAAAGAAAATGAGCCCATAGTGGTTGAGGAGTTTCAAGCGATAGAGTTTAAGGTTGAAAGGCCTTTGTCTGTTCTATCCTCT
CCATCCTCTCTTGATAATGAGTGTTCTTTTTCTTATTCTCACGAGTCTGTCCGCGTGGAGAGTTCTAGAATCGCGATAGCGTCGCGACGCTGTCTAGGTAGCGTCTCGAC
GCTGCGACGTCTTGGAGCCCAAGAAAAGATGACGTCAGAGCGTCGCGACGCTGTGACGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGTTTCTCTTCGGTTGATATTAACAGGGTTTATCAGATCAAAGCTTCTTTGCAACCGAGAGGGAACGATGCAATCACAAATCCTTCGGCCAAGCATTTAAAAGA
AGCATTGAAAATTGTGGCAAGGAAGGGAGTCCAATGGAAGGAATCTCAGACCAAAGTGAAGTCTCTTGTGCCAAGCGACTTAAAGCCCGAACTAGCAGTATGGCTTCACT
TCATTAAAAATAGATTGATGCCCACCACCCATGATAGTACAATTTTAGTAGAGAGGGTCATGCTTCTCTATAGCATAATGAAAGGGTTGGAGATCAATATTGGCAGCATC
ATTAGGGAGGAGATCCTATCTTGTGGGAGAAAGAGACTGGACCGCATTGAAGAGAAATTGAAAGCATACTGGGTCTATGCAGAGGAAAGAGATGAAGCAACTAGAGAGTT
ATATCTCTCTATCGCCCCAACCATCGCTCCTGTTTCCCTTACTTTCCTCAAACCTTGCTGCCTCGAGAAGAAGAAGAGTCTGAAAATGAAGATGAAGAAGTTGGAGAGAC
TTCCTCAGAGGAGGAATAGGGGACCAAGAAGGGAGGAGAGTGAAGTGCAACCCACTTCCATAGAAGAAGAATCTTCCTTAGAGAGCTTGCTTGAAGATTTTATTGAGGAG
TCTAGAGCCATGAATTTAGAATTAGAAAAATCTATGGAGAGATTCCAGACCCAAAGGGAAGATAAGGAAGTAGGATCCACTTCCATAGAGTGTCTAGTGAGTCATGTGGC
CAGTGATTCATTAGTGCCGATTCAAGAGCCTAATCCTTTCAATTTTGCTGAGTTTGAGCATATAGGGGTGAGCTGTATAGGAATAGAGGAAGAATTGGATAGTTCTAGCA
CCCATCAAGAACAAGTTTGTGAGGAAGAAAAAGAAAATGAGCCCATAGTGGTTGAGGAGTTTCAAGCGATAGAGTTTAAGGTTGAAAGGCCTTTGTCTGTTCTATCCTCT
CCATCCTCTCTTGATAATGAGTGTTCTTTTTCTTATTCTCACGAGTCTGTCCGCGTGGAGAGTTCTAGAATCGCGATAGCGTCGCGACGCTGTCTAGGTAGCGTCTCGAC
GCTGCGACGTCTTGGAGCCCAAGAAAAGATGACGTCAGAGCGTCGCGACGCTGTGACGTAG
Protein sequenceShow/hide protein sequence
MVSFSSVDINRVYQIKASLQPRGNDAITNPSAKHLKEALKIVARKGVQWKESQTKVKSLVPSDLKPELAVWLHFIKNRLMPTTHDSTILVERVMLLYSIMKGLEINIGSI
IREEILSCGRKRLDRIEEKLKAYWVYAEERDEATRELYLSIAPTIAPVSLTFLKPCCLEKKKSLKMKMKKLERLPQRRNRGPRREESEVQPTSIEEESSLESLLEDFIEE
SRAMNLELEKSMERFQTQREDKEVGSTSIECLVSHVASDSLVPIQEPNPFNFAEFEHIGVSCIGIEEELDSSSTHQEQVCEEEKENEPIVVEEFQAIEFKVERPLSVLSS
PSSLDNECSFSYSHESVRVESSRIAIASRRCLGSVSTLRRLGAQEKMTSERRDAVT