CuGenDBv2

Gene ID	Spg021494
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CMP/dCMP-type deaminase domain-containing protein
Genome location	scaffold9:5719949..5725556
RNA-Seq Expression	Spg021494
Synteny	Spg021494
Gene Ontology terms	GO:0071704 - organic substance metabolic process (biological process) GO:0052717 - tRNA-specific adenosine-34 deaminase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6607517.1 tRNA-specific adenosine deaminase TAD3, partial [Cucurbita argyrosperma subsp. sororia]

3.6e-31

91.67

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Query:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV
        VNVFAAVVEPKLINNLVR LN+IAPLENLRH+KRVQKK LEDGKTLIALILCLASEN+SNLDAMP DVQ+LVTSYQLSAFITKV
Subjt:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV

XP_022141843.1 probable inactive tRNA-specific adenosine deaminase-like protein 3 [Momordica charantia]

6.1e-31

91.67

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Query:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV
        VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKK LEDGKT IALILCLA ENN NLD MP DVQ+LVTSYQLSAFITKV
Subjt:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV

XP_022948266.1 probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1 [Cucurbita moschata]

1.8e-30

89.29

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Query:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV
        VNVFAAVVEPKLINNLVR LN+IAPLENLRH+KRVQKK LEDGKTLIALILCLASEN+SN+DAMP DV++LVTSYQLSAFITKV
Subjt:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV

XP_022973452.1 probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1 [Cucurbita maxima]

1.8e-30

89.29

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Query:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV
        VNVFAAVVEPKLINNLVR LN+IAPLENLRHVKRVQKK LEDGKTLIALILCLASEN+S++DAMP DVQ++VTSYQLSAFITKV
Subjt:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV

XP_023523263.1 probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1 [Cucurbita pepo subsp. pepo]

2.7e-31

92.86

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Query:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV
        VNVFAAVVEPKLINNLVR LN+IAPLENLRHVKRVQKK LEDGKTLIALILCLASEN+SNLDAMP DVQ+LVTSYQLSAFITKV
Subjt:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E5X7 probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X2

4.7e-29

85.71

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Query:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV
        VNVFAAVVEPK+INNLVRRLNQIAPLENLRHVKRVQKK LEDGKT IALILC+ASENN +LD + P VQ+LVTSY+LSAFITKV
Subjt:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV

A0A5A7SQZ4 Putative inactive tRNA-specific adenosine deaminase-like protein 3 isoform X6

4.7e-29

85.71

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Query:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV
        VNVFAAVVEPK+INNLVRRLNQIAPLENLRHVKRVQKK LEDGKT IALILC+ASENN +LD + P VQ+LVTSY+LSAFITKV
Subjt:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV

A0A6J1CLQ3 probable inactive tRNA-specific adenosine deaminase-like protein 3

2.9e-31

91.67

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Query:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV
        VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKK LEDGKT IALILCLA ENN NLD MP DVQ+LVTSYQLSAFITKV
Subjt:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV

A0A6J1G8T4 probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1

8.5e-31

89.29

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Query:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV
        VNVFAAVVEPKLINNLVR LN+IAPLENLRH+KRVQKK LEDGKTLIALILCLASEN+SN+DAMP DV++LVTSYQLSAFITKV
Subjt:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV

A0A6J1I7K0 probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1

8.5e-31

89.29

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Query:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV
        VNVFAAVVEPKLINNLVR LN+IAPLENLRHVKRVQKK LEDGKTLIALILCLASEN+S++DAMP DVQ++VTSYQLSAFITKV
Subjt:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV

SwissProt top hits

e value

%identity

Alignment

F4KH86 tRNA-specific adenosine deaminase TAD3

1.2e-18

57.65

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Query:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLED-GKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV
        V V+A++++P+  N +VR L +IAPLE+LRHVKRV+KK L D G+T + +ILCLA E+N  L  MPPDVQ+LV  Y+LS FIT+V
Subjt:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLED-GKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV

Arabidopsis top hits

e value

%identity

Alignment

AT5G24670.1 Cytidine/deoxycytidylate deaminase family protein

8.7e-20

57.65

Show/hide

Query:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLED-GKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV
        V V+A++++P+  N +VR L +IAPLE+LRHVKRV+KK L D G+T + +ILCLA E+N  L  MPPDVQ+LV  Y+LS FIT+V
Subjt:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLED-GKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV

AT5G24670.2 Cytidine/deoxycytidylate deaminase family protein

2.5e-19

55.06

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Query:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLED-----GKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV
        V V+A++++P+  N +VR L +IAPLE+LRHVKRV+KK L D     G+T + +ILCLA E+N  L  MPPDVQ+LV  Y+LS FIT+V
Subjt:  VNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLED-----GKTLIALILCLASENNSNLDAMPPDVQKLVTSYQLSAFITKV

Sequences

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CDS sequence

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CTGTTGAAGGGCGCTGTCGCCGTCGCTCCTGTCACGCCAGATCCCGTCGACTGTGGCAGCGCTGCCGTTGTTCCTCACCGGAAAACGGAGACCCGAGCGTCGCCGCTTCT
TTTCCTCTCTTTTTCCTTGCGTTCCCTTGGTTCTGTGTTGATCAGATCTCTCGTGATCAGCAGTTTGAAGCTTTGTCTCTCGCGTCTTCTCCTCTTTCCAGCATCGTTTT
GGGCGTTTTCGGCGTCGTTTAGCGATTCCGCGCCGTCTAAGTGTTCGATTGAGTTTGAATCACTTAAGCTTGAACACCCACTGCCCAAGGAGCGTTCTAGCACACGGTTC
GAGTGTGAGCTGCTTACCAGTACCACGGTTGTACTGATACCCCCTTCCCCATCTCCCCCCAACATTTTAGATGTTGCAGGTTTGGACGATGGGCTGGACCTTGGAAGTAG
ATACGAGGCCTGGCTCGTTCTTCAAGATTGTGTTTCGATTATAGAAGTGTTTTCACCTTATCTCCGAAGTGGCAATACCTGCCCATGTGAAGAGCAAGAGAGTAATGGTA
ACCCTAGCCACCTTCTTCCTTCGGATCTTGCTTGTGCTGCCATCGTCGTTCTCCATGTCTGCCGCTGCATAGTTCCGGTATTAGGAAGTTCTGATGCTAGACTAGCTCGA
TCATCCCCCTCCTTTTTCTTTTTGCATTATAATGAGATCCTCTTGTTGTTTGAAAACTCTTTATACTTTCTCAAACATTGTTTTTGTTTGTTAATCGTAGTTAATGTATT
TGCTGCAGTGGTTGAGCCCAAGTTAATCAACAATCTTGTGAGGCGCTTAAATCAGATAGCCCCATTGGAAAATCTCCGCCATGTAAAGAGAGTTCAGAAGAAGCAGCTTG
AAGATGGGAAGACTCTAATAGCATTGATCCTATGTCTTGCAAGTGAAAACAATAGCAATTTGGATGCCATGCCTCCAGATGTACAAAAGCTCGTGACTTCATATCAGTTG
AGTGCCTTTATCACAAAGGTGCATTCTCCTATTGATTGA

mRNA sequence

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Protein sequence

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LLKGAVAVAPVTPDPVDCGSAAVVPHRKTETRASPLLFLSFSLRSLGSVLIRSLVISSLKLCLSRLLLFPASFWAFSASFSDSAPSKCSIEFESLKLEHPLPKERSSTRF
ECELLTSTTVVLIPPSPSPPNILDVAGLDDGLDLGSRYEAWLVLQDCVSIIEVFSPYLRSGNTCPCEEQESNGNPSHLLPSDLACAAIVVLHVCRCIVPVLGSSDARLAR
SSPSFFFLHYNEILLLFENSLYFLKHCFCLLIVVNVFAAVVEPKLINNLVRRLNQIAPLENLRHVKRVQKKQLEDGKTLIALILCLASENNSNLDAMPPDVQKLVTSYQL
SAFITKVHSPID

Spg021494 (gene) of Sponge gourd (cylindrica) v1 genome