CuGenDBv2

Gene ID	Spg021496
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein PARTING DANCERS
Genome location	scaffold9:8059909..8061379
RNA-Seq Expression	Spg021496
Synteny	Spg021496
Gene Ontology terms	GO:0000712 - resolution of meiotic recombination intermediates (biological process) GO:0019953 - sexual reproduction (biological process) GO:0032501 - multicellular organismal process (biological process) GO:0032502 - developmental process (biological process) GO:0043229 - intracellular organelle (cellular component)
InterPro domains	IPR039172 - Protein parting dancers

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022152444.1 protein PARTING DANCERS isoform X1 [Momordica charantia]

5.1e-33

69.17

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Query:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK
        MEIGKPPF+PVQDIEMGFEKIVKIAHSRG  KQ DVMSKLRTE                            LNQAIGSIEAIAKASKEYILENTDLS DK
Subjt:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK

Query:  TERIRTFFKDPKLYLSPKIN
         ERIR FF+DPK YLSPKIN
Subjt:  TERIRTFFKDPKLYLSPKIN

XP_022152445.1 protein PARTING DANCERS isoform X2 [Momordica charantia]

3.0e-33

70.34

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Query:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE--------------------------LNQAIGSIEAIAKASKEYILENTDLSVDKTE
        MEIGKPPF+PVQDIEMGFEKIVKIAHSRG  KQ DVMSKLRTE                          LNQAIGSIEAIAKASKEYILENTDLS DK E
Subjt:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE--------------------------LNQAIGSIEAIAKASKEYILENTDLSVDKTE

Query:  RIRTFFKDPKLYLSPKIN
        RIR FF+DPK YLSPKIN
Subjt:  RIRTFFKDPKLYLSPKIN

XP_022938483.1 protein PARTING DANCERS [Cucurbita moschata]

8.6e-33

69.17

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Query:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK
        MEIGKPPFVPVQD+EMGFEKIVKIAHSRG  KQ DVMSKLRTE                            LNQAIGSIEAIAKASKE ILENTDLSVDK
Subjt:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK

Query:  TERIRTFFKDPKLYLSPKIN
         ERIR+FF+DPK YLSPKIN
Subjt:  TERIRTFFKDPKLYLSPKIN

XP_022992780.1 protein PARTING DANCERS [Cucurbita maxima]

7.8e-34

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Query:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK
        MEIGKPPFVPVQD+EMGFEKIVKIAHSRG  KQ DVMSKLRTE                            LNQAIGSIEAIAKASKEYILENTDLSVDK
Subjt:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK

Query:  TERIRTFFKDPKLYLSPKIN
         ERIR+FF+DPK YLSPKIN
Subjt:  TERIRTFFKDPKLYLSPKIN

XP_023549745.1 protein PARTING DANCERS [Cucurbita pepo subsp. pepo]

3.9e-33

69.17

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Query:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK
        MEIGKPPFVPVQD+EMGFEKIVKIAHSRG  KQ DVMSKL TE                            LNQAIGSIEAIAKASKEYILENTDLSVDK
Subjt:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK

Query:  TERIRTFFKDPKLYLSPKIN
         ERIR+FF+DPK YLSPKIN
Subjt:  TERIRTFFKDPKLYLSPKIN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LMP7 Uncharacterized protein

9.3e-33

68.33

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Query:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK
        MEIGKPPFV VQDIEMGFEKIVKIAHSRG  KQ D++SKLRTE                            LNQAIGSIEAIAKASKEYILENTDLSV+K
Subjt:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK

Query:  TERIRTFFKDPKLYLSPKIN
         ERIR+FF+DPKLYLSPKIN
Subjt:  TERIRTFFKDPKLYLSPKIN

A0A6J1DDY5 protein PARTING DANCERS isoform X2

1.4e-33

70.34

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Query:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE--------------------------LNQAIGSIEAIAKASKEYILENTDLSVDKTE
        MEIGKPPF+PVQDIEMGFEKIVKIAHSRG  KQ DVMSKLRTE                          LNQAIGSIEAIAKASKEYILENTDLS DK E
Subjt:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE--------------------------LNQAIGSIEAIAKASKEYILENTDLSVDKTE

Query:  RIRTFFKDPKLYLSPKIN
        RIR FF+DPK YLSPKIN
Subjt:  RIRTFFKDPKLYLSPKIN

A0A6J1DG15 protein PARTING DANCERS isoform X1

2.5e-33

69.17

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Query:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK
        MEIGKPPF+PVQDIEMGFEKIVKIAHSRG  KQ DVMSKLRTE                            LNQAIGSIEAIAKASKEYILENTDLS DK
Subjt:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK

Query:  TERIRTFFKDPKLYLSPKIN
         ERIR FF+DPK YLSPKIN
Subjt:  TERIRTFFKDPKLYLSPKIN

A0A6J1FJ08 protein PARTING DANCERS

4.2e-33

69.17

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Query:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK
        MEIGKPPFVPVQD+EMGFEKIVKIAHSRG  KQ DVMSKLRTE                            LNQAIGSIEAIAKASKE ILENTDLSVDK
Subjt:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK

Query:  TERIRTFFKDPKLYLSPKIN
         ERIR+FF+DPK YLSPKIN
Subjt:  TERIRTFFKDPKLYLSPKIN

A0A6J1JWN6 protein PARTING DANCERS

3.8e-34

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Query:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK
        MEIGKPPFVPVQD+EMGFEKIVKIAHSRG  KQ DVMSKLRTE                            LNQAIGSIEAIAKASKEYILENTDLSVDK
Subjt:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK

Query:  TERIRTFFKDPKLYLSPKIN
         ERIR+FF+DPK YLSPKIN
Subjt:  TERIRTFFKDPKLYLSPKIN

SwissProt top hits

e value

%identity

Alignment

F4IDW9 Protein PARTING DANCERS

2.9e-23

54.17

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Query:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK
        ME GKP FV V D EMGFEKIVKIAHSRG  KQ  V SKL+ E                            L QAIGSIEAIAKASKE IL NTDLS  K
Subjt:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK

Query:  TERIRTFFKDPKLYLSPKIN
         + +  FF+DP+ YLSPK N
Subjt:  TERIRTFFKDPKLYLSPKIN

Q6L5B5 Protein PARTING DANCERS homolog

5.3e-25

54.17

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Query:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK
        M++G P FVPV D EMGFEKIVKIAH+ G  KQ D++S+L+ E                            L QAIGSIEAIAKASK++ILENTDLS DK
Subjt:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK

Query:  TERIRTFFKDPKLYLSPKIN
         E I  FF+DP+ YLSPKIN
Subjt:  TERIRTFFKDPKLYLSPKIN

Arabidopsis top hits

e value

%identity

Alignment

AT1G12790.1 CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

2.1e-24

54.17

Show/hide

Query:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK
        ME GKP FV V D EMGFEKIVKIAHSRG  KQ  V SKL+ E                            L QAIGSIEAIAKASKE IL NTDLS  K
Subjt:  MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTE----------------------------LNQAIGSIEAIAKASKEYILENTDLSVDK

Query:  TERIRTFFKDPKLYLSPKIN
         + +  FF+DP+ YLSPK N
Subjt:  TERIRTFFKDPKLYLSPKIN

Sequences

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CDS sequence

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ATGGAGATTGGTAAGCCACCATTTGTACCAGTTCAGGATATTGAAATGGGCTTTGAGAAGATTGTAAAGATAGCACACTCTCGTGGAACAGGCAAGCAGCACGATGTTAT
GTCAAAACTGAGGACCGAGCTAAATCAAGCCATTGGTTCAATTGAAGCAATCGCGAAAGCATCGAAGGAGTACATTTTGGAGAACACAGATCTGTCAGTGGACAAGACAG
AGAGAATTAGGACCTTTTTCAAGGATCCAAAGTTGTACCTCAGTCCCAAAATAAATTGA

mRNA sequence

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Protein sequence

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MEIGKPPFVPVQDIEMGFEKIVKIAHSRGTGKQHDVMSKLRTELNQAIGSIEAIAKASKEYILENTDLSVDKTERIRTFFKDPKLYLSPKIN

Spg021496 (gene) of Sponge gourd (cylindrica) v1 genome