; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg021523 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021523
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionVARLMGL domain-containing protein
Genome locationscaffold9:5941592..5943166
RNA-Seq ExpressionSpg021523
SyntenySpg021523
Gene Ontology termsNA
InterPro domainsIPR032795 - DUF3741-associated sequence motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595453.1 hypothetical protein SDJN03_12006, partial [Cucurbita argyrosperma subsp. sororia]3.5e-7071.17Show/hide
Query:  GKSKQEKDIIVFSSSSPSDQSLVSAAGVSPATPPPQGQRRSRSDKEGKKTDIVDFSRRRISCDLPMRSPTLSAEIRRSSSMNSPQTIGKSPTLVARLMGL
        GKSKQEKDIIVFSSSS SDQ L SAAG+SP TP PQG RRSRS+KEGK+T++VDFSRRRISCDLP RSPTLSAEIRRSSS+NSP  I KSP LVARLMGL
Subjt:  GKSKQEKDIIVFSSSSPSDQSLVSAAGVSPATPPPQGQRRSRSDKEGKKTDIVDFSRRRISCDLPMRSPTLSAEIRRSSSMNSPQTIGKSPTLVARLMGL

Query:  EAV---PIEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPESPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQQQAMF-----------KKN
        EAV   P+EE S+EKRRKLLGALEKCDNDLKALK+IIMAFRSPES  SATA+AG CLNRDKV+TIS RKCRDCNCSD EKQQQ              + +
Subjt:  EAV---PIEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPESPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQQQAMF-----------KKN

Query:  LERREKRRRKKEKKKRVVGRQP
        L R  +  R +E  ++   +QP
Subjt:  LERREKRRRKKEKKKRVVGRQP

XP_023517459.1 uncharacterized protein LOC111781218 isoform X1 [Cucurbita pepo subsp. pepo]1.4e-7181.97Show/hide
Query:  GKSKQEKDIIVFSSSSPSDQSLVSAAGVSPATPPPQGQRRSRSDKEGKKTDIVDFSRRRISCDLPMRSPTLSAEIRRSSSMNSPQTIGKSPTLVARLMGL
        GKSKQEKDIIVFSSSS SDQ L SAAG+SP TP PQG RRSRS+KEGK+T++VDFSRRRISCDLP RSPTLSAEIRRSS++NSP  I KSP LVARLMGL
Subjt:  GKSKQEKDIIVFSSSSPSDQSLVSAAGVSPATPPPQGQRRSRSDKEGKKTDIVDFSRRRISCDLPMRSPTLSAEIRRSSSMNSPQTIGKSPTLVARLMGL

Query:  EAV---PIEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPESPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQQQ
        EAV   P+EE S+EKRRKLLGALEKCDNDLKALK+IIMAFRSPES  +ATA+AG CLNRDKV+TIS RKCRDCNCSD EKQQQ
Subjt:  EAV---PIEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPESPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQQQ

XP_023517460.1 uncharacterized protein LOC111781218 isoform X2 [Cucurbita pepo subsp. pepo]1.4e-7181.97Show/hide
Query:  GKSKQEKDIIVFSSSSPSDQSLVSAAGVSPATPPPQGQRRSRSDKEGKKTDIVDFSRRRISCDLPMRSPTLSAEIRRSSSMNSPQTIGKSPTLVARLMGL
        GKSKQEKDIIVFSSSS SDQ L SAAG+SP TP PQG RRSRS+KEGK+T++VDFSRRRISCDLP RSPTLSAEIRRSS++NSP  I KSP LVARLMGL
Subjt:  GKSKQEKDIIVFSSSSPSDQSLVSAAGVSPATPPPQGQRRSRSDKEGKKTDIVDFSRRRISCDLPMRSPTLSAEIRRSSSMNSPQTIGKSPTLVARLMGL

Query:  EAV---PIEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPESPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQQQ
        EAV   P+EE S+EKRRKLLGALEKCDNDLKALK+IIMAFRSPES  +ATA+AG CLNRDKV+TIS RKCRDCNCSD EKQQQ
Subjt:  EAV---PIEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPESPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQQQ

XP_023517461.1 uncharacterized protein LOC111781218 isoform X3 [Cucurbita pepo subsp. pepo]1.4e-7181.97Show/hide
Query:  GKSKQEKDIIVFSSSSPSDQSLVSAAGVSPATPPPQGQRRSRSDKEGKKTDIVDFSRRRISCDLPMRSPTLSAEIRRSSSMNSPQTIGKSPTLVARLMGL
        GKSKQEKDIIVFSSSS SDQ L SAAG+SP TP PQG RRSRS+KEGK+T++VDFSRRRISCDLP RSPTLSAEIRRSS++NSP  I KSP LVARLMGL
Subjt:  GKSKQEKDIIVFSSSSPSDQSLVSAAGVSPATPPPQGQRRSRSDKEGKKTDIVDFSRRRISCDLPMRSPTLSAEIRRSSSMNSPQTIGKSPTLVARLMGL

Query:  EAV---PIEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPESPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQQQ
        EAV   P+EE S+EKRRKLLGALEKCDNDLKALK+IIMAFRSPES  +ATA+AG CLNRDKV+TIS RKCRDCNCSD EKQQQ
Subjt:  EAV---PIEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPESPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQQQ

XP_023517463.1 uncharacterized protein LOC111781218 isoform X4 [Cucurbita pepo subsp. pepo]1.4e-7181.97Show/hide
Query:  GKSKQEKDIIVFSSSSPSDQSLVSAAGVSPATPPPQGQRRSRSDKEGKKTDIVDFSRRRISCDLPMRSPTLSAEIRRSSSMNSPQTIGKSPTLVARLMGL
        GKSKQEKDIIVFSSSS SDQ L SAAG+SP TP PQG RRSRS+KEGK+T++VDFSRRRISCDLP RSPTLSAEIRRSS++NSP  I KSP LVARLMGL
Subjt:  GKSKQEKDIIVFSSSSPSDQSLVSAAGVSPATPPPQGQRRSRSDKEGKKTDIVDFSRRRISCDLPMRSPTLSAEIRRSSSMNSPQTIGKSPTLVARLMGL

Query:  EAV---PIEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPESPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQQQ
        EAV   P+EE S+EKRRKLLGALEKCDNDLKALK+IIMAFRSPES  +ATA+AG CLNRDKV+TIS RKCRDCNCSD EKQQQ
Subjt:  EAV---PIEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPESPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQQQ

TrEMBL top hitse value%identityAlignment
A0A0A0L3D7 VARLMGL domain-containing protein1.9e-5364.41Show/hide
Query:  GKSKQEKDIIVFSSSSP-SDQSLVSAAGVSPATPPPQGQRRSRSDK--EGKKTDIVDFSRRRISCDLPMRSPTLSAEIRRSSSMNSPQTIGKSPTLVARL
        GKSKQEKDIIVFSS+S  SD + VSA  +SPATPPPQ QRRSRSDK  EGK T++VDFSR+RIS DLP RSPTLS EIRRSSS+N P  IGKSP LVARL
Subjt:  GKSKQEKDIIVFSSSSP-SDQSLVSAAGVSPATPPPQGQRRSRSDK--EGKKTDIVDFSRRRISCDLPMRSPTLSAEIRRSSSMNSPQTIGKSPTLVARL

Query:  MGLEAVP-IEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPE-SPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQ--QQAMFKKNLERREKR
        MGLEAVP  EE S EKRRKLLGALEKCDNDLKALK+IIMAFRSPE     +  IAG  +N DKV  IS RKCRD +CSD EK+   +      + R  K+
Subjt:  MGLEAVP-IEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPE-SPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQ--QQAMFKKNLERREKR

Query:  RRK--KEKKKRVVGRQPSAMAE
        R    +E K+    + P+A+ E
Subjt:  RRK--KEKKKRVVGRQPSAMAE

A0A5D3CEV5 VARLMGL domain-containing protein2.7e-6078.14Show/hide
Query:  GKSKQEKDIIVFSSSSP-SDQSLVSAAGVSPATPPPQGQRRSRSD--KEGKKTDIVDFSRRRISCDLPMRSPTLSAEIRRSSSMNSPQTIGKSPTLVARL
        GKSKQEKDIIVFSS+S  SD + VSAA VSPATPPPQ QRRSRSD  KEGK T++VDFSRRRISCDLP RSPTLSAEIRRSSS+NSP   GKSP LVARL
Subjt:  GKSKQEKDIIVFSSSSP-SDQSLVSAAGVSPATPPPQGQRRSRSD--KEGKKTDIVDFSRRRISCDLPMRSPTLSAEIRRSSSMNSPQTIGKSPTLVARL

Query:  MGLEAVP-IEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPE-SPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQ
        MGLEAVP  EE SSEKRRKLLGALEKCDNDLKALK+IIMA RSPE + P +T IA   ++ DKVR IS RKCRD NCSDGEK+
Subjt:  MGLEAVP-IEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPE-SPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQ

A0A6J1DKI5 uncharacterized protein LOC1110217762.9e-6265.09Show/hide
Query:  GKSKQEKDIIVF---SSSSPSDQSLVSAAGVSPATPPPQGQRRSRSDKEGKKTDIVDFSRRRISCDLPMRSPTLSAEIRRSSSMNSP-QTIGKSPTLVAR
        GKSKQEKDIIVF   SSSSP+DQ LVSA+G S A+P  Q QRR RSDKE K T++VD   RRIS DLP RSPTLSAEIRRSSS+NSP  TIG SP LVAR
Subjt:  GKSKQEKDIIVF---SSSSPSDQSLVSAAGVSPATPPPQGQRRSRSDKEGKKTDIVDFSRRRISCDLPMRSPTLSAEIRRSSSMNSP-QTIGKSPTLVAR

Query:  LMGLEAVPIEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPESPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQQQ--------AMFKKNLE
        LMGLE+VP+E  SSEKRRKLLGALEKCDNDLKALKEIIMA+RSP+S P AT IAGKCLNR+KVRTISGRKCRD  C DGEK+QQ           + +L 
Subjt:  LMGLEAVPIEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPESPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQQQ--------AMFKKNLE

Query:  RREKRRRKKEKKKRVVGRQPSAMAEGVGEEEE
        R  +  R +E  + ++ +QP      V E+++
Subjt:  RREKRRRKKEKKKRVVGRQPSAMAEGVGEEEE

A0A6J1EE78 uncharacterized protein LOC1114324291.5e-2663.41Show/hide
Query:  MGLEAV---PIEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPESPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQQQ-----AMF----KK
        MGLEAV   P+EE S+EKRRKLLGALEKCDNDLKALK+IIMAFRSPES  SATA+AG CLNRDKV+TIS RKCRDCNCSD E+QQQ     ++F    + 
Subjt:  MGLEAV---PIEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPESPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQQQ-----AMF----KK

Query:  NLERREKRRRKKEKKKRVVGRQP
        +L R  +  R +E  ++   +QP
Subjt:  NLERREKRRRKKEKKKRVVGRQP

A0A6J1HMZ3 uncharacterized protein LOC1114660896.1e-2881.4Show/hide
Query:  MGLEAV---PIEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPESPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQQQ
        MGLEAV   P+EE S+EKRRKLLGALEKCDNDLKALK+IIMAFRSPES   ATA+AG CLNRDKV+TIS RKCRDCNC D EKQQQ
Subjt:  MGLEAV---PIEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPESPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQQQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGATTTTCTTGATTTTTTAGGAAAGAGTAAGCAGGAGAAGGATATTATTGTGTTTTCTTCTTCATCTCCTTCGGATCAGAGCCTAGTCTCGGCCGCCGGTGTATC
TCCGGCTACTCCACCGCCGCAGGGACAACGAAGGTCGCGAAGTGATAAAGAAGGAAAAAAAACGGACATCGTTGATTTCAGTCGGAGAAGAATCTCCTGCGATTTACCGA
TGAGGAGTCCAACTCTTTCGGCGGAGATACGGCGTTCGAGCTCCATGAACTCTCCGCAGACGATCGGAAAATCTCCGACTCTGGTAGCACGGTTGATGGGACTGGAAGCG
GTGCCGATAGAAGAAAAGTCAAGTGAGAAGAGGAGGAAACTGTTGGGAGCGCTGGAGAAATGCGATAATGACTTAAAGGCTCTGAAGGAGATCATCATGGCGTTTCGGTC
ACCGGAGAGTCCTCCGTCGGCGACGGCGATTGCTGGAAAGTGCCTGAATCGAGATAAAGTAAGAACGATTTCTGGACGAAAGTGTAGGGATTGTAACTGCAGCGACGGCG
AGAAGCAGCAGCAGGCCATGTTCAAGAAAAATCTGGAGAGAAGGGAAAAGAGAAGGAGAAAGAAAGAAAAAAAAAAAAGAGTCGTCGGCCGCCAGCCGTCGGCCATGGCT
GAAGGTGTTGGAGAAGAAGAAGAAGGTCTGCTTGAGGTTCTGCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGATTTTCTTGATTTTTTAGGAAAGAGTAAGCAGGAGAAGGATATTATTGTGTTTTCTTCTTCATCTCCTTCGGATCAGAGCCTAGTCTCGGCCGCCGGTGTATC
TCCGGCTACTCCACCGCCGCAGGGACAACGAAGGTCGCGAAGTGATAAAGAAGGAAAAAAAACGGACATCGTTGATTTCAGTCGGAGAAGAATCTCCTGCGATTTACCGA
TGAGGAGTCCAACTCTTTCGGCGGAGATACGGCGTTCGAGCTCCATGAACTCTCCGCAGACGATCGGAAAATCTCCGACTCTGGTAGCACGGTTGATGGGACTGGAAGCG
GTGCCGATAGAAGAAAAGTCAAGTGAGAAGAGGAGGAAACTGTTGGGAGCGCTGGAGAAATGCGATAATGACTTAAAGGCTCTGAAGGAGATCATCATGGCGTTTCGGTC
ACCGGAGAGTCCTCCGTCGGCGACGGCGATTGCTGGAAAGTGCCTGAATCGAGATAAAGTAAGAACGATTTCTGGACGAAAGTGTAGGGATTGTAACTGCAGCGACGGCG
AGAAGCAGCAGCAGGCCATGTTCAAGAAAAATCTGGAGAGAAGGGAAAAGAGAAGGAGAAAGAAAGAAAAAAAAAAAAGAGTCGTCGGCCGCCAGCCGTCGGCCATGGCT
GAAGGTGTTGGAGAAGAAGAAGAAGGTCTGCTTGAGGTTCTGCAGTAA
Protein sequenceShow/hide protein sequence
MSDFLDFLGKSKQEKDIIVFSSSSPSDQSLVSAAGVSPATPPPQGQRRSRSDKEGKKTDIVDFSRRRISCDLPMRSPTLSAEIRRSSSMNSPQTIGKSPTLVARLMGLEA
VPIEEKSSEKRRKLLGALEKCDNDLKALKEIIMAFRSPESPPSATAIAGKCLNRDKVRTISGRKCRDCNCSDGEKQQQAMFKKNLERREKRRRKKEKKKRVVGRQPSAMA
EGVGEEEEGLLEVLQ