; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg021532 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021532
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationscaffold9:6757075..6763037
RNA-Seq ExpressionSpg021532
SyntenySpg021532
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_013630685.1 PREDICTED: uncharacterized protein LOC106336398 [Brassica oleracea var. oleracea]2.3e-1234.94Show/hide
Query:  QSHLALAKTSSEVSSSAGKSHV----AGTCSSLIPASNSWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLFIPD
        Q HL +   +SE   S   ++     AG  + L     +W+ID+GAS H+C+   +F C   +S   VTLP+  R+ VE  GT+ I P LTL  VLFIP 
Subjt:  QSHLALAKTSSEVSSSAGKSHV----AGTCSSLIPASNSWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLFIPD

Query:  FRFNLISLPHI-RNPTSQVLISHLQSSACFCDSLDSPFRIQSQAVDLFLSL-SAHNHEFRITGPPS
        F+FNL+S+  + RN T  VL     S AC+    +   ++Q    D  +   + HN+ + +  P S
Subjt:  FRFNLISLPHI-RNPTSQVLISHLQSSACFCDSLDSPFRIQSQAVDLFLSL-SAHNHEFRITGPPS

XP_018448482.1 PREDICTED: uncharacterized protein LOC108819979 [Raphanus sativus]1.5e-1137.39Show/hide
Query:  HVAGTCSSLIPASNSWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLFIPDFRFNLISLPHIRNPTSQVLISHLQ
        H   T  S +P  N+W++DSGAS+H+CY   +F+ L  VS  SVTLPN  ++ + + GT+ +   L L +VL +PDF FNLIS+  +    +    +H  
Subjt:  HVAGTCSSLIPASNSWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLFIPDFRFNLISLPHIRNPTSQVLISHLQ

Query:  SSACFCDSLDSPFRI
           CF   L     I
Subjt:  SSACFCDSLDSPFRI

XP_022845245.1 uncharacterized protein LOC111368228 [Olea europaea var. sylvestris]6.6e-1236.07Show/hide
Query:  MLQSHLALAKTSSEVSSSAGKSHVAGTCSS-----LIPASNSWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLF
        ML SHL  AK  + + +    SH  GTC S     ++ +   W++DSGA+ H+C+   LF  +  +    +TLPN  R+ V++ GT+++   LTL  VL+
Subjt:  MLQSHLALAKTSSEVSSSAGKSHVAGTCSS-----LIPASNSWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLF

Query:  IPDFRFNLISLPHIRNPTSQVL
        +P F FNL+S      PTS+++
Subjt:  IPDFRFNLISLPHIRNPTSQVL

XP_022856063.1 uncharacterized protein LOC111377235, partial [Olea europaea var. sylvestris]8.6e-1241.44Show/hide
Query:  MLQSHLALAKTSSEVSSSAGKSHVAGTCSSLI--PASNS---WVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLF
        ML +HL  AKT++   +    + V+GTC S++  P  NS   WV+DSGA++HIC+SK  F  +  +    VTLPN  R+ V ++G V+    L L+ VL+
Subjt:  MLQSHLALAKTSSEVSSSAGKSHVAGTCSSLI--PASNS---WVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLF

Query:  IPDFRFNLISL
        +P+F+FNL+S+
Subjt:  IPDFRFNLISL

XP_041995943.1 uncharacterized protein LOC121746088 [Salvia splendens]3.0e-1235.07Show/hide
Query:  AKTSSEVSSSAGKSHVAGTCSSLIPASNSWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLFIPDFRFNLISLPH
        A +SS  S +   +    + SSL  +S++W++D+GA+ H+CY + LFT    +S  SV LPN +   V ++GT+++ P +TL  VL +P F FNLIS+  
Subjt:  AKTSSEVSSSAGKSHVAGTCSSLIPASNSWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLFIPDFRFNLISLPH

Query:  IRNPTSQVLISHLQSSACFCDSLDSPFRIQSQAV
        +            Q+S C     DS F+IQ  ++
Subjt:  IRNPTSQVLISHLQSSACFCDSLDSPFRIQSQAV

TrEMBL top hitse value%identityAlignment
A0A1S3V0N0 uncharacterized protein LOC1067704166.0e-1143.21Show/hide
Query:  SWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLFIPDFRFNLISLPHIRNPTSQVL
        SW++D+GA+ H+ + K+ FT   K+   SV LPN+  +T  Y GTV+  P  T+ +VL+IPDF FNLIS+  +   T+ +L
Subjt:  SWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLFIPDFRFNLISLPHIRNPTSQVL

A0A5A7VE66 Cysteine-rich RLK (Receptor-like protein kinase) 81.0e-1035Show/hide
Query:  MLQSHLALAKTSSEVSSSAGKSHVAG---TCSSLIPASNSWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLFIP
        +L +HL  A T++ ++++   +H +G     S    + + W+IDSGAS HIC+ K LF      +   V LPN HR++V+ IG ++I   LTLK VLF+ 
Subjt:  MLQSHLALAKTSSEVSSSAGKSHVAG---TCSSLIPASNSWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLFIP

Query:  DFRFNLISLPHIRNPTSQVLISHLQSSACFCDSLDSPFRI
         F +NLIS+  +    ++ +    QS+ C    L  P  I
Subjt:  DFRFNLISLPHIRNPTSQVLISHLQSSACFCDSLDSPFRI

A0A6J0KKJ8 uncharacterized protein LOC1088199797.1e-1237.39Show/hide
Query:  HVAGTCSSLIPASNSWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLFIPDFRFNLISLPHIRNPTSQVLISHLQ
        H   T  S +P  N+W++DSGAS+H+CY   +F+ L  VS  SVTLPN  ++ + + GT+ +   L L +VL +PDF FNLIS+  +    +    +H  
Subjt:  HVAGTCSSLIPASNSWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLFIPDFRFNLISLPHIRNPTSQVLISHLQ

Query:  SSACFCDSLDSPFRI
           CF   L     I
Subjt:  SSACFCDSLDSPFRI

O81617 F8M12.17 protein7.9e-1150Show/hide
Query:  TCSSL--IPASNSWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLFIPDFRFNLISL
        T SSL  + +S++W+IDSGAS+H+C    +F  LI VSG +VTLPN  R+ + + GT+ I   L L +VL +PDF+FNLIS+
Subjt:  TCSSL--IPASNSWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLFIPDFRFNLISL

Q9SN55 Putative retrotransposon polyprotein2.1e-1136.36Show/hide
Query:  TCSSL--IPASNSWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLFIPDFRFNLISLPHIRNPTSQVLISHLQSS
        T SSL  + +S++W+IDSGAS+H+C    +F  LI VSG +VTLPN  R+ + + GT+ I   L L +VL +PDF+FNLIS+  +    S    +H  + 
Subjt:  TCSSL--IPASNSWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLFIPDFRFNLISLPHIRNPTSQVLISHLQSS

Query:  ACFCDSLDSPFRI-QSQAVDLFLSLSAHNHEFRITGPPSVSFT
         C+   L     I + +  +    L      F  + P + SFT
Subjt:  ACFCDSLDSPFRI-QSQAVDLFLSLSAHNHEFRITGPPSVSFT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCAATCTCATTTGGCGCTTGCAAAGACTAGTTCTGAAGTCTCTTCATCGGCTGGAAAATCACACGTCGCAGGTACTTGTTCCTCCTTAATTCCTGCTTCAAATTC
TTGGGTAATTGACTCTGGCGCATCTGCCCATATATGCTATTCCAAGGATCTATTTACTTGCTTGATAAAAGTCTCTGGCCATTCTGTGACTCTCCCTAATCAGCATCGTT
TAACAGTAGAGTATATTGGCACTGTTGAGATTTTTCCTGGACTTACTTTGAAGCATGTGTTGTTCATCCCTGATTTTCGGTTTAATCTCATCTCACTCCCTCACATACGA
AACCCTACATCCCAAGTTCTCATTTCCCATCTCCAATCTTCAGCTTGTTTCTGCGATTCTTTGGATTCACCATTTCGTATTCAGAGTCAAGCCGTCGATCTATTTCTCTC
TCTCTCAGCCCACAATCACGAATTTCGCATCACAGGGCCACCGTCAGTCTCTTTCACACGCCGTCGGTCACAATTTCTCGCTCTCACACCGGCGACACAAGTGAGCCACA
AAATGGGGGGAGAAGAACTCACACTTGTAACTCAAAGTGCCAACAAGGTTTATTCTTTGCTATGTGTCCATTCAGTCATGCAAATGGGAAAAGATGTAATTTTTGTTTTG
CAGACAATGGCAACAACTCTTATAGCCCATGCCAATAACTGGTTGAATGAGAGGACTCTTTCATTTCTCTCTAGAAGATCAATTGTTGCACATCCAAATGGCGTGACCTT
AAGGTTGATGAAAGAATTACTTCACAACAATGGAATGTCTTGGCCACAACCCAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCAATCTCATTTGGCGCTTGCAAAGACTAGTTCTGAAGTCTCTTCATCGGCTGGAAAATCACACGTCGCAGGTACTTGTTCCTCCTTAATTCCTGCTTCAAATTC
TTGGGTAATTGACTCTGGCGCATCTGCCCATATATGCTATTCCAAGGATCTATTTACTTGCTTGATAAAAGTCTCTGGCCATTCTGTGACTCTCCCTAATCAGCATCGTT
TAACAGTAGAGTATATTGGCACTGTTGAGATTTTTCCTGGACTTACTTTGAAGCATGTGTTGTTCATCCCTGATTTTCGGTTTAATCTCATCTCACTCCCTCACATACGA
AACCCTACATCCCAAGTTCTCATTTCCCATCTCCAATCTTCAGCTTGTTTCTGCGATTCTTTGGATTCACCATTTCGTATTCAGAGTCAAGCCGTCGATCTATTTCTCTC
TCTCTCAGCCCACAATCACGAATTTCGCATCACAGGGCCACCGTCAGTCTCTTTCACACGCCGTCGGTCACAATTTCTCGCTCTCACACCGGCGACACAAGTGAGCCACA
AAATGGGGGGAGAAGAACTCACACTTGTAACTCAAAGTGCCAACAAGGTTTATTCTTTGCTATGTGTCCATTCAGTCATGCAAATGGGAAAAGATGTAATTTTTGTTTTG
CAGACAATGGCAACAACTCTTATAGCCCATGCCAATAACTGGTTGAATGAGAGGACTCTTTCATTTCTCTCTAGAAGATCAATTGTTGCACATCCAAATGGCGTGACCTT
AAGGTTGATGAAAGAATTACTTCACAACAATGGAATGTCTTGGCCACAACCCAACTAA
Protein sequenceShow/hide protein sequence
MLQSHLALAKTSSEVSSSAGKSHVAGTCSSLIPASNSWVIDSGASAHICYSKDLFTCLIKVSGHSVTLPNQHRLTVEYIGTVEIFPGLTLKHVLFIPDFRFNLISLPHIR
NPTSQVLISHLQSSACFCDSLDSPFRIQSQAVDLFLSLSAHNHEFRITGPPSVSFTRRRSQFLALTPATQVSHKMGGEELTLVTQSANKVYSLLCVHSVMQMGKDVIFVL
QTMATTLIAHANNWLNERTLSFLSRRSIVAHPNGVTLRLMKELLHNNGMSWPQPN