; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg021558 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021558
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranscription factor bHLH54-like
Genome locationscaffold9:4782003..4787930
RNA-Seq ExpressionSpg021558
SyntenySpg021558
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591418.1 Transcription factor basic helix-loop-helix 85, partial [Cucurbita argyrosperma subsp. sororia]4.1e-2865.42Show/hide
Query:  NAADQFPCVGAADYHMSMSGGAIEEKKMESVFSACNDILLQEINGFCGEDRFLNVDVETHQGD--NASNLANALHHKRKSIVVVGDDDLDHNKLNNDPNK
        NA DQFPC+ AAD++MSMS  AIEE KM+S+FSAC D+LLQEI+ F GEDR+LN+DV+T  G+  NA+N A A HHKRKSIVV  DD   HNKLNN P K
Subjt:  NAADQFPCVGAADYHMSMSGGAIEEKKMESVFSACNDILLQEINGFCGEDRFLNVDVETHQGD--NASNLANALHHKRKSIVVVGDDDLDHNKLNNDPNK

Query:  SIHASNN
         I  SNN
Subjt:  SIHASNN

KAG7024298.1 Transcription factor bHLH84 [Cucurbita argyrosperma subsp. argyrosperma]6.3e-2966.36Show/hide
Query:  NAADQFPCVGAADYHMSMSGGAIEEKKMESVFSACNDILLQEINGFCGEDRFLNVDVETHQGD--NASNLANALHHKRKSIVVVGDDDLDHNKLNNDPNK
        NA DQFPC+ AAD++MSMS  AIEE KM+S+FSAC D+LLQEI+ F GEDR+LN+DV+T  G+  NA+N A A HHKRKSIVV  DDD  HNKLNN P K
Subjt:  NAADQFPCVGAADYHMSMSGGAIEEKKMESVFSACNDILLQEINGFCGEDRFLNVDVETHQGD--NASNLANALHHKRKSIVVVGDDDLDHNKLNNDPNK

Query:  SIHASNN
         I  SNN
Subjt:  SIHASNN

XP_022937063.1 transcription factor bHLH139-like [Cucurbita moschata]4.5e-2765.42Show/hide
Query:  NAADQFPCVGAADYHMSMSGGAIEEKKMESVFSACNDILLQEINGFCGEDRFLNVDVETHQGD--NASNLANALHHKRKSIVVVGDDDLDHNKLNNDPNK
        NA DQFPC+ AAD++MSMS  AIEE KM+S+FSAC D+LLQEI+ F GEDR+LN+DV+T  G+  NA+N A A HHKRKSI VV DDD  HN LNN P K
Subjt:  NAADQFPCVGAADYHMSMSGGAIEEKKMESVFSACNDILLQEINGFCGEDRFLNVDVETHQGD--NASNLANALHHKRKSIVVVGDDDLDHNKLNNDPNK

Query:  SIHASNN
         I  SNN
Subjt:  SIHASNN

XP_022977069.1 transcription factor bHLH54-like [Cucurbita maxima]4.5e-2763.55Show/hide
Query:  NAADQFPCVGAADYHMSMSGGAIEEKKMESVFSACNDILLQEINGFCGEDRFLNVDVETHQG--DNASNLANALHHKRKSIVVVGDDDLDHNKLNNDPNK
        NA DQFPC+ AAD++MSMS  AIEE +M+S+FSAC D+LLQEI+ F GEDR+LN+DV+T  G  +NA+N A A HHKRKSIVV  DD   HN LNN P K
Subjt:  NAADQFPCVGAADYHMSMSGGAIEEKKMESVFSACNDILLQEINGFCGEDRFLNVDVETHQG--DNASNLANALHHKRKSIVVVGDDDLDHNKLNNDPNK

Query:  SIHASNN
         I  SNN
Subjt:  SIHASNN

XP_023536485.1 transcription factor bHLH84-like [Cucurbita pepo subsp. pepo]1.3e-2662.62Show/hide
Query:  NAADQFPCVGAADYHMSMSGGAIEEKKMESVFSACNDILLQEINGFCGEDRFLNVDVETHQGD--NASNLANALHHKRKSIVVVGDDDLDHNKLNNDPNK
        NA DQFPC+ AAD++M MS  AI+E KM+S+FSAC D+LLQEI+ F GEDR+LN+DV+T  G+  NA+N A A HHKRKSIVV  DD   HN LNN P K
Subjt:  NAADQFPCVGAADYHMSMSGGAIEEKKMESVFSACNDILLQEINGFCGEDRFLNVDVETHQGD--NASNLANALHHKRKSIVVVGDDDLDHNKLNNDPNK

Query:  SIHASNN
         I  SNN
Subjt:  SIHASNN

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)3.5e-1727.18Show/hide
Query:  EAVVPLVREFYAGLREKSMSMAVVKGKM----RQLCN----------------QEPSAKKLKVALKMVSNKGVQWKESQTKVKTLLPSDIKPEPTVWLHF
        + +VPLVREFYA L +   +   V+G       +  N                Q  + + L   L+ V+  G +W  S     T + S + P   VW HF
Subjt:  EAVVPLVREFYAGLREKSMSMAVVKGKM----RQLCN----------------QEPSAKKLKVALKMVSNKGVQWKESQTKVKTLLPSDIKPEPTVWLHF

Query:  IKNRLMRTTHDNTISVDRVMLLYSIMKGLEINIGSIIQEEILSCGRKRAGKLFFGSLITQLCQRVKIVPGKVEERHFFRRTIDLPLIGKLQQNNAQREDK
        +K+RL+ TTH  T+S DR++LL+S++ G  IN+G +I  EI +C  ++ G LFF SLIT+LC+  +      EE+      ID   + ++ Q       +
Subjt:  IKNRLMRTTHDNTISVDRVMLLYSIMKGLEINIGSIIQEEILSCGRKRAGKLFFGSLITQLCQRVKIVPGKVEERHFFRRTIDLPLIGKLQQNNAQREDK

Query:  ASTSQATPSPGLNPTSP---PQHTPISGPTPSSEALAFAFRK-LERIEDKFKTYWVYAKDSDEASKEFYLSIAPSIAPVFPDIPKSLLPQEEKESKDEDE
          +S    +   N T+     Q   +       E   +     L+    + + +W Y+K+ D A K+   +      P FP  P+ +L   + E + E +
Subjt:  ASTSQATPSPGLNPTSP---PQHTPISGPTPSSEALAFAFRK-LERIEDKFKTYWVYAKDSDEASKEFYLSIAPSIAPVFPDIPKSLLPQEEKESKDEDE

Query:  DEDEDERDE
         +  +E  E
Subjt:  DEDEDERDE

A0A2P5DAQ2 Uncharacterized protein4.6e-1732.53Show/hide
Query:  EAVVPLVREFYAGLREKSMSMAVVKGKMRQLC--------------------NQEPSAKKLKVALKMVSNKGVQWKESQTKVKTLLPSDIKPEPTVWLHF
        + +VPLVREFY  +         ++G    L                      ++ +  +L + L+ V+  G +W  S     T L S + P   VW HF
Subjt:  EAVVPLVREFYAGLREKSMSMAVVKGKMRQLC--------------------NQEPSAKKLKVALKMVSNKGVQWKESQTKVKTLLPSDIKPEPTVWLHF

Query:  IKNRLMRTTHDNTISVDRVMLLYSIMKGLEINIGSIIQEEILSCGRKRAGKLFFGSLITQLCQRVK
        +K+RL+ TTH  T+S + V LLYS++ G  IN+G +I  EI +C  +++G LFF SLIT +C+  +
Subjt:  IKNRLMRTTHDNTISVDRVMLLYSIMKGLEINIGSIIQEEILSCGRKRAGKLFFGSLITQLCQRVK

A0A6J1FEZ9 transcription factor bHLH139-like2.2e-2765.42Show/hide
Query:  NAADQFPCVGAADYHMSMSGGAIEEKKMESVFSACNDILLQEINGFCGEDRFLNVDVETHQGD--NASNLANALHHKRKSIVVVGDDDLDHNKLNNDPNK
        NA DQFPC+ AAD++MSMS  AIEE KM+S+FSAC D+LLQEI+ F GEDR+LN+DV+T  G+  NA+N A A HHKRKSI VV DDD  HN LNN P K
Subjt:  NAADQFPCVGAADYHMSMSGGAIEEKKMESVFSACNDILLQEINGFCGEDRFLNVDVETHQGD--NASNLANALHHKRKSIVVVGDDDLDHNKLNNDPNK

Query:  SIHASNN
         I  SNN
Subjt:  SIHASNN

A0A6J1IQF1 transcription factor bHLH54-like2.2e-2763.55Show/hide
Query:  NAADQFPCVGAADYHMSMSGGAIEEKKMESVFSACNDILLQEINGFCGEDRFLNVDVETHQG--DNASNLANALHHKRKSIVVVGDDDLDHNKLNNDPNK
        NA DQFPC+ AAD++MSMS  AIEE +M+S+FSAC D+LLQEI+ F GEDR+LN+DV+T  G  +NA+N A A HHKRKSIVV  DD   HN LNN P K
Subjt:  NAADQFPCVGAADYHMSMSGGAIEEKKMESVFSACNDILLQEINGFCGEDRFLNVDVETHQG--DNASNLANALHHKRKSIVVVGDDDLDHNKLNNDPNK

Query:  SIHASNN
         I  SNN
Subjt:  SIHASNN

W9RBS1 Uncharacterized protein1.4e-1827.8Show/hide
Query:  LEAVVPLVREFYAGLREKSMSMAVV-----------KGKMRQLCNQEPS---------AKKLKVALKMVSNKGVQWKESQTKVKTLLPSDIKPEPTVWLH
        ++ +VPLV+EFYA L+ +  +   V              +  + NQ+            ++LK  LK ++  G QW  S     T    +++P   VW H
Subjt:  LEAVVPLVREFYAGLREKSMSMAVV-----------KGKMRQLCNQEPS---------AKKLKVALKMVSNKGVQWKESQTKVKTLLPSDIKPEPTVWLH

Query:  FIKNRLMRTTHDNTISVDRVMLLYSIMKGLEINIGSIIQEEILSCGRKRAGKLFFGSLITQLCQRVKIVPGKVEERHFFRRTIDLPLIGKLQQNNAQRED
        F+ +RL+ +TH  TIS +R +LLY+++ G  IN+G +I ++I +C  K  G L+F SLI++LC +  +     E R      +DL  I ++    +++ +
Subjt:  FIKNRLMRTTHDNTISVDRVMLLYSIMKGLEINIGSIIQEEILSCGRKRAGKLFFGSLITQLCQRVKIVPGKVEERHFFRRTIDLPLIGKLQQNNAQRED

Query:  KASTSQATPSPGLNPTSPPQHTPISGPTPSSEAL-----AFAFRKLERIE------DKFKTYWVYAKDSDEASKEFY
        K    +    P    TS   HT  +    S E L      F  ++ E  E      ++   +WVY++D D A K+ +
Subjt:  KASTSQATPSPGLNPTSPPQHTPISGPTPSSEAL-----AFAFRKLERIE------DKFKTYWVYAKDSDEASKEFY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGCCTGTCGCCTCTCCCAGTCTCCTCTCGTGCTTGTGTTTACCGCCACCGTCGGTGCTTTTCGTGCTTGCTGCCGACACGATTATATTCGGATTAAAGCCCTTGA
GTTAAATGAGTTTGCGCTATTAAAGCCCTTGAGTTTCAAAAAGTCTGTTCCGTTGTTGCTGGTAGCCGAAACTCCCTCGCCATATGCGAAGATGGCAAGAGAAGAAAGTA
ATGATAATAATGCTGCTGATCAATTTCCTTGTGTTGGTGCTGCTGATTATCATATGTCGATGTCTGGTGGCGCGATTGAAGAGAAGAAGATGGAGTCTGTTTTCTCCGCT
TGTAATGACATTTTGTTGCAAGAGATCAATGGCTTTTGCGGTGAAGATAGATTTTTAAACGTGGATGTTGAAACCCATCAAGGGGATAATGCTAGCAATCTTGCAAATGC
ATTGCACCACAAAAGGAAGTCCATTGTTGTCGTTGGTGATGATGATCTTGATCACAACAAGCTCAACAACGACCCCAATAAGAGCATTCATGCTTCAAACAATGCAACAA
TGGAATATGGAGAGGCTGAGTCATTTTCTCTGTTATTGGTCCTCAAAGCATTCACCTTTCTGGAGGCCGTTGTGCCTCTAGTTCGAGAGTTTTATGCTGGATTGAGGGAG
AAGAGCATGAGCATGGCGGTGGTGAAGGGGAAGATGAGGCAATTATGCAATCAAGAACCCTCGGCCAAAAAGTTAAAGGTAGCATTGAAGATGGTGTCCAACAAAGGAGT
TCAATGGAAGGAATCTCAAACAAAAGTGAAGACACTATTGCCGAGCGACATAAAGCCAGAACCGACAGTATGGCTTCACTTCATCAAGAATAGGTTGATGCGAACAACCC
ACGATAACACCATTTCAGTAGATAGGGTTATGCTTCTCTACAGCATCATGAAAGGGTTAGAGATAAACATAGGGAGCATCATTCAAGAGGAGATCCTTTCATGTGGAAGG
AAGAGAGCGGGGAAGCTGTTCTTTGGGTCACTTATAACCCAATTGTGTCAGAGGGTGAAGATAGTTCCTGGAAAAGTTGAGGAACGCCACTTTTTCAGGCGCACCATTGA
CTTGCCTCTGATTGGGAAGCTTCAACAGAACAATGCTCAGAGAGAGGACAAGGCTTCCACATCTCAAGCTACTCCATCCCCGGGGTTGAATCCTACTTCACCTCCTCAGC
ACACTCCCATTTCAGGGCCCACACCATCATCAGAGGCCCTTGCATTTGCCTTCCGAAAGCTAGAACGGATTGAAGACAAGTTTAAAACTTATTGGGTCTATGCTAAGGAC
AGTGATGAAGCAAGTAAAGAGTTCTACCTCTCTATCGCCCCCAGCATTGCCCCTGTGTTCCCTGACATCCCTAAATCACTGCTTCCTCAAGAAGAAAAAGAATCTAAAGA
TGAAGATGAAGATGAAGATGAAGATGAAAGAGATGAAGAGAGTTCCTCGGATGAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCGCCTGTCGCCTCTCCCAGTCTCCTCTCGTGCTTGTGTTTACCGCCACCGTCGGTGCTTTTCGTGCTTGCTGCCGACACGATTATATTCGGATTAAAGCCCTTGA
GTTAAATGAGTTTGCGCTATTAAAGCCCTTGAGTTTCAAAAAGTCTGTTCCGTTGTTGCTGGTAGCCGAAACTCCCTCGCCATATGCGAAGATGGCAAGAGAAGAAAGTA
ATGATAATAATGCTGCTGATCAATTTCCTTGTGTTGGTGCTGCTGATTATCATATGTCGATGTCTGGTGGCGCGATTGAAGAGAAGAAGATGGAGTCTGTTTTCTCCGCT
TGTAATGACATTTTGTTGCAAGAGATCAATGGCTTTTGCGGTGAAGATAGATTTTTAAACGTGGATGTTGAAACCCATCAAGGGGATAATGCTAGCAATCTTGCAAATGC
ATTGCACCACAAAAGGAAGTCCATTGTTGTCGTTGGTGATGATGATCTTGATCACAACAAGCTCAACAACGACCCCAATAAGAGCATTCATGCTTCAAACAATGCAACAA
TGGAATATGGAGAGGCTGAGTCATTTTCTCTGTTATTGGTCCTCAAAGCATTCACCTTTCTGGAGGCCGTTGTGCCTCTAGTTCGAGAGTTTTATGCTGGATTGAGGGAG
AAGAGCATGAGCATGGCGGTGGTGAAGGGGAAGATGAGGCAATTATGCAATCAAGAACCCTCGGCCAAAAAGTTAAAGGTAGCATTGAAGATGGTGTCCAACAAAGGAGT
TCAATGGAAGGAATCTCAAACAAAAGTGAAGACACTATTGCCGAGCGACATAAAGCCAGAACCGACAGTATGGCTTCACTTCATCAAGAATAGGTTGATGCGAACAACCC
ACGATAACACCATTTCAGTAGATAGGGTTATGCTTCTCTACAGCATCATGAAAGGGTTAGAGATAAACATAGGGAGCATCATTCAAGAGGAGATCCTTTCATGTGGAAGG
AAGAGAGCGGGGAAGCTGTTCTTTGGGTCACTTATAACCCAATTGTGTCAGAGGGTGAAGATAGTTCCTGGAAAAGTTGAGGAACGCCACTTTTTCAGGCGCACCATTGA
CTTGCCTCTGATTGGGAAGCTTCAACAGAACAATGCTCAGAGAGAGGACAAGGCTTCCACATCTCAAGCTACTCCATCCCCGGGGTTGAATCCTACTTCACCTCCTCAGC
ACACTCCCATTTCAGGGCCCACACCATCATCAGAGGCCCTTGCATTTGCCTTCCGAAAGCTAGAACGGATTGAAGACAAGTTTAAAACTTATTGGGTCTATGCTAAGGAC
AGTGATGAAGCAAGTAAAGAGTTCTACCTCTCTATCGCCCCCAGCATTGCCCCTGTGTTCCCTGACATCCCTAAATCACTGCTTCCTCAAGAAGAAAAAGAATCTAAAGA
TGAAGATGAAGATGAAGATGAAGATGAAAGAGATGAAGAGAGTTCCTCGGATGAGGAATAG
Protein sequenceShow/hide protein sequence
MFACRLSQSPLVLVFTATVGAFRACCRHDYIRIKALELNEFALLKPLSFKKSVPLLLVAETPSPYAKMAREESNDNNAADQFPCVGAADYHMSMSGGAIEEKKMESVFSA
CNDILLQEINGFCGEDRFLNVDVETHQGDNASNLANALHHKRKSIVVVGDDDLDHNKLNNDPNKSIHASNNATMEYGEAESFSLLLVLKAFTFLEAVVPLVREFYAGLRE
KSMSMAVVKGKMRQLCNQEPSAKKLKVALKMVSNKGVQWKESQTKVKTLLPSDIKPEPTVWLHFIKNRLMRTTHDNTISVDRVMLLYSIMKGLEINIGSIIQEEILSCGR
KRAGKLFFGSLITQLCQRVKIVPGKVEERHFFRRTIDLPLIGKLQQNNAQREDKASTSQATPSPGLNPTSPPQHTPISGPTPSSEALAFAFRKLERIEDKFKTYWVYAKD
SDEASKEFYLSIAPSIAPVFPDIPKSLLPQEEKESKDEDEDEDEDERDEESSSDEE