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Spg021593 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021593
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationscaffold9:5606545..5609856
RNA-Seq ExpressionSpg021593
SyntenySpg021593
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037923.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]8.6e-1057.14Show/hide
Query:  RGLSGQIRWESHFHSFKPRENRPSLQTRELAK---APEAIWYRVHTGYIPLLTLSVLHDNDAV
        RG+S    WE   H F+ R  +PS QT++LA+    PEAIWYRVH G+IPLLTLSVL +ND V
Subjt:  RGLSGQIRWESHFHSFKPRENRPSLQTRELAK---APEAIWYRVHTGYIPLLTLSVLHDNDAV

KAA0065516.1 uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]5.1e-1063.24Show/hide
Query:  PRENRPSLQTRELAKAPEAIWYRVHTGYIPLLTLSVLHDNDAVVSAGGSHYDKDDGSAGRAPLHRRVN
        PR NR SLQT EL K          T    L TLSVL DNDAVVSAGG HYDKDDG+A RAPLHRR +
Subjt:  PRENRPSLQTRELAKAPEAIWYRVHTGYIPLLTLSVLHDNDAVVSAGGSHYDKDDGSAGRAPLHRRVN

TYJ98800.1 uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]5.1e-1063.24Show/hide
Query:  PRENRPSLQTRELAKAPEAIWYRVHTGYIPLLTLSVLHDNDAVVSAGGSHYDKDDGSAGRAPLHRRVN
        PR NR SLQT EL K          T    L TLSVL DNDAVVSAGG HYDKDDG+A RAPLHRR +
Subjt:  PRENRPSLQTRELAKAPEAIWYRVHTGYIPLLTLSVLHDNDAVVSAGGSHYDKDDGSAGRAPLHRRVN

TYK02787.1 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein [Cucumis melo var. makuwa]4.4e-0663.83Show/hide
Query:  YRVHTGYIPLLTLSVLHDNDAVVSAGGSHYDKDDGSAGRAPLHRRVN
        YRVHT YI LLTLSVL DN+ ++S       KDDGSAGR PLHRR +
Subjt:  YRVHTGYIPLLTLSVLHDNDAVVSAGGSHYDKDDGSAGRAPLHRRVN

TYK08801.1 hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]6.0e-1148.6Show/hide
Query:  PRENRPSLQTRELAKAPEAIWYRVH------------TGYIPLLTLSVLHDNDAVVSAGGSHYDKDDG-SAGRAPLHRRVNVGCTGRALHNV----KIEL
        PR NR SLQT +L K   +I Y                   PL TLSVL DNDAVVS G +HYDKDDG   G   +   VNVGCTGR LH++    +IEL
Subjt:  PRENRPSLQTRELAKAPEAIWYRVH------------TGYIPLLTLSVLHDNDAVVSAGGSHYDKDDG-SAGRAPLHRRVNVGCTGRALHNV----KIEL

Query:  PVPVKLP
         VP  LP
Subjt:  PVPVKLP

TrEMBL top hitse value%identityAlignment
A0A5A7T4K8 Reverse transcriptase4.2e-1057.14Show/hide
Query:  RGLSGQIRWESHFHSFKPRENRPSLQTRELAK---APEAIWYRVHTGYIPLLTLSVLHDNDAV
        RG+S    WE   H F+ R  +PS QT++LA+    PEAIWYRVH G+IPLLTLSVL +ND V
Subjt:  RGLSGQIRWESHFHSFKPRENRPSLQTRELAK---APEAIWYRVHTGYIPLLTLSVLHDNDAV

A0A5A7VGQ5 Uncharacterized protein2.5e-1063.24Show/hide
Query:  PRENRPSLQTRELAKAPEAIWYRVHTGYIPLLTLSVLHDNDAVVSAGGSHYDKDDGSAGRAPLHRRVN
        PR NR SLQT EL K          T    L TLSVL DNDAVVSAGG HYDKDDG+A RAPLHRR +
Subjt:  PRENRPSLQTRELAKAPEAIWYRVHTGYIPLLTLSVLHDNDAVVSAGGSHYDKDDGSAGRAPLHRRVN

A0A5D3BG85 Uncharacterized protein2.5e-1063.24Show/hide
Query:  PRENRPSLQTRELAKAPEAIWYRVHTGYIPLLTLSVLHDNDAVVSAGGSHYDKDDGSAGRAPLHRRVN
        PR NR SLQT EL K          T    L TLSVL DNDAVVSAGG HYDKDDG+A RAPLHRR +
Subjt:  PRENRPSLQTRELAKAPEAIWYRVHTGYIPLLTLSVLHDNDAVVSAGGSHYDKDDGSAGRAPLHRRVN

A0A5D3BTJ5 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein2.2e-0663.83Show/hide
Query:  YRVHTGYIPLLTLSVLHDNDAVVSAGGSHYDKDDGSAGRAPLHRRVN
        YRVHT YI LLTLSVL DN+ ++S       KDDGSAGR PLHRR +
Subjt:  YRVHTGYIPLLTLSVLHDNDAVVSAGGSHYDKDDGSAGRAPLHRRVN

A0A5D3CAC6 Uncharacterized protein2.9e-1148.6Show/hide
Query:  PRENRPSLQTRELAKAPEAIWYRVH------------TGYIPLLTLSVLHDNDAVVSAGGSHYDKDDG-SAGRAPLHRRVNVGCTGRALHNV----KIEL
        PR NR SLQT +L K   +I Y                   PL TLSVL DNDAVVS G +HYDKDDG   G   +   VNVGCTGR LH++    +IEL
Subjt:  PRENRPSLQTRELAKAPEAIWYRVH------------TGYIPLLTLSVLHDNDAVVSAGGSHYDKDDG-SAGRAPLHRRVNVGCTGRALHNV----KIEL

Query:  PVPVKLP
         VP  LP
Subjt:  PVPVKLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGAAGTAGGTTTAATTTCAGGAGAAAAGTAGAGGATTGCAAAGAAGCACGAATTTGGAATAGTTGTGTTCGGGGACTTTCTGGACAAATCCGTTGGGAATCGCA
TTTTCATTCCTTCAAGCCAAGAGAAAATAGGCCGAGTCTACAGACCAGGGAACTAGCCAAGGCTCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGT
TGACGTTGAGTGTACTCCATGACAATGATGCTGTCGTGAGTGCTGGCGGGTCCCACTACGATAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGAGTAAAC
GTCGGTTGTACTGGACGTGCCCTACACAACGTAAAGATCGAGCTCCCGGTGCCTGTTAAACTGCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTAGAAGTAGGTTTAATTTCAGGAGAAAAGTAGAGGATTGCAAAGAAGCACGAATTTGGAATAGTTGTGTTCGGGGACTTTCTGGACAAATCCGTTGGGAATCGCA
TTTTCATTCCTTCAAGCCAAGAGAAAATAGGCCGAGTCTACAGACCAGGGAACTAGCCAAGGCTCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGT
TGACGTTGAGTGTACTCCATGACAATGATGCTGTCGTGAGTGCTGGCGGGTCCCACTACGATAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGAGTAAAC
GTCGGTTGTACTGGACGTGCCCTACACAACGTAAAGATCGAGCTCCCGGTGCCTGTTAAACTGCCATAG
Protein sequenceShow/hide protein sequence
MTRSRFNFRRKVEDCKEARIWNSCVRGLSGQIRWESHFHSFKPRENRPSLQTRELAKAPEAIWYRVHTGYIPLLTLSVLHDNDAVVSAGGSHYDKDDGSAGRAPLHRRVN
VGCTGRALHNVKIELPVPVKLP