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Spg021600 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021600
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L11
Genome locationscaffold9:6940390..6944093
RNA-Seq ExpressionSpg021600
SyntenySpg021600
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002132 - Ribosomal protein L5
IPR022803 - Ribosomal protein L5 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5243721.1 60S ribosomal protein [Salix suchowensis]6.1e-1248.89Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVLPEEDIGIEIFYGVGVGNMDGALRICPEQFYPYLRQSLVGIKTFCRTGI
        MQLLESGLKVKEYELLRRNFSDTGCF FG+QEHID+GI Y   +   GI   YG+               FY ++R+ ++ +   C++ +
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVLPEEDIGIEIFYGVGVGNMDGALRICPEQFYPYLRQSLVGIKTFCRTGI

KHG21292.1 60S ribosomal protein L11-1 [Gossypium arboreum]9.4e-1348.08Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVLPEEDIGIEIFYGVGVGNMDGALRICPEQFYPYLRQS--LVGIKTFC--RTGIRSQGSP
        MQLLESGLKVKEYELLRRNFSDTGCF FG+QEHID+GIN  L    +     +G+ +   D +  I    FY  L ++   VG +  C  R GI+ + + 
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVLPEEDIGIEIFYGVGVGNMDGALRICPEQFYPYLRQS--LVGIKTFC--RTGIRSQGSP

Query:  EPTL
        E  +
Subjt:  EPTL

KHG21293.1 60S ribosomal protein L11-1 [Gossypium arboreum]9.4e-1348.08Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVLPEEDIGIEIFYGVGVGNMDGALRICPEQFYPYLRQS--LVGIKTFC--RTGIRSQGSP
        MQLLESGLKVKEYELLRRNFSDTGCF FG+QEHID+GIN  L    +     +G+ +   D +  I    FY  L ++   VG +  C  R GI+ + + 
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVLPEEDIGIEIFYGVGVGNMDGALRICPEQFYPYLRQS--LVGIKTFC--RTGIRSQGSP

Query:  EPTL
        E  +
Subjt:  EPTL

XP_021898009.1 60S ribosomal protein L11-like isoform X1 [Carica papaya]4.7e-1288.1Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVL
        MQLLESGLKVKEYELLRRNFSDTGCF FG+QEHID+GI YV+
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVL

XP_021898010.1 60S ribosomal protein L11-like isoform X2 [Carica papaya]4.7e-1288.1Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVL
        MQLLESGLKVKEYELLRRNFSDTGCF FG+QEHID+GI YV+
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVL

TrEMBL top hitse value%identityAlignment
A0A0B0P3N6 60S ribosomal protein L11-14.6e-1348.08Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVLPEEDIGIEIFYGVGVGNMDGALRICPEQFYPYLRQS--LVGIKTFC--RTGIRSQGSP
        MQLLESGLKVKEYELLRRNFSDTGCF FG+QEHID+GIN  L    +     +G+ +   D +  I    FY  L ++   VG +  C  R GI+ + + 
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVLPEEDIGIEIFYGVGVGNMDGALRICPEQFYPYLRQS--LVGIKTFC--RTGIRSQGSP

Query:  EPTL
        E  +
Subjt:  EPTL

A0A0B0P8V6 60S ribosomal protein L11-14.6e-1348.08Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVLPEEDIGIEIFYGVGVGNMDGALRICPEQFYPYLRQS--LVGIKTFC--RTGIRSQGSP
        MQLLESGLKVKEYELLRRNFSDTGCF FG+QEHID+GIN  L    +     +G+ +   D +  I    FY  L ++   VG +  C  R GI+ + + 
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVLPEEDIGIEIFYGVGVGNMDGALRICPEQFYPYLRQS--LVGIKTFC--RTGIRSQGSP

Query:  EPTL
        E  +
Subjt:  EPTL

A0A2P5WFK3 Uncharacterized protein4.6e-1348.08Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVLPEEDIGIEIFYGVGVGNMDGALRICPEQFYPYLRQS--LVGIKTFC--RTGIRSQGSP
        MQLLESGLKVKEYELLRRNFSDTGCF FG+QEHID+GIN  L    +     +G+ +   D +  I    FY  L ++   VG +  C  R GI+ + + 
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVLPEEDIGIEIFYGVGVGNMDGALRICPEQFYPYLRQS--LVGIKTFC--RTGIRSQGSP

Query:  EPTL
        E  +
Subjt:  EPTL

A0A444FMN7 Ribosomal_L5_C domain-containing protein5.0e-1285.71Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVL
        MQLLESGLKVKEYELLRRNFSDTGCF FG+QEHID+GIN+ +
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVL

C0HGI3 Uncharacterized protein3.9e-1271.19Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY--VLPEEDIGIEIFYGVGV
        MQLLESGLKVKEYELLRRNFSDTGCF FG+QEHID+GI Y  VL  E++     YG G+
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY--VLPEEDIGIEIFYGVGV

SwissProt top hitse value%identityAlignment
A2YDY2 60S ribosomal protein L118.8e-1487.5Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY
        MQLLESGLKVKEYELLRRNFS+TGCF FG+QEHID+GI Y
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY

P42794 60S ribosomal protein L11-23.0e-1490Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY
        MQLLESGLKVKEYELLRRNFSDTGCF FG+QEHID+GI Y
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY

P42795 60S ribosomal protein L11-13.0e-1490Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY
        MQLLESGLKVKEYELLRRNFSDTGCF FG+QEHID+GI Y
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY

P46287 60S ribosomal protein L111.8e-1473.08Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVLPEEDIGIEIF
        MQLLESGLKVKEYELLRRNFSDTGCF FG+QEHID+GI Y       G++ F
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVLPEEDIGIEIF

Q0DK10 60S ribosomal protein L118.8e-1487.5Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY
        MQLLESGLKVKEYELLRRNFS+TGCF FG+QEHID+GI Y
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY

Arabidopsis top hitse value%identityAlignment
AT2G42740.1 ribosomal protein large subunit 16A2.2e-1590Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY
        MQLLESGLKVKEYELLRRNFSDTGCF FG+QEHID+GI Y
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY

AT3G58700.1 Ribosomal L5P family protein2.2e-1590Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY
        MQLLESGLKVKEYELLRRNFSDTGCF FG+QEHID+GI Y
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY

AT4G18730.1 ribosomal protein L16B2.2e-1590Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY
        MQLLESGLKVKEYELLRRNFSDTGCF FG+QEHID+GI Y
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY

AT5G45775.1 Ribosomal L5P family protein2.2e-1590Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY
        MQLLESGLKVKEYELLRRNFSDTGCF FG+QEHID+GI Y
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY

AT5G45775.2 Ribosomal L5P family protein2.2e-1590Show/hide
Query:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY
        MQLLESGLKVKEYELLRRNFSDTGCF FG+QEHID+GI Y
Subjt:  MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACTTTTGGAAAGTGGGTTGAAGGTTAAGGAGTATGAGTTGCTTCGCAGGAACTTCAGTGACACTGGATGCTTTGACTTTGGTCTTCAGGAGCACATTGATATTGG
AATCAATTATGTATTGCCTGAAGAAGATATAGGAATTGAAATTTTCTATGGAGTTGGGGTTGGGAACATGGATGGAGCTCTCAGGATCTGTCCTGAACAGTTTTATCCCT
ATCTGCGACAATCTCTTGTGGGGATAAAAACTTTCTGTAGGACTGGGATAAGGAGCCAGGGTAGTCCTGAACCCACTTTGAATGATTTGTGTTTTATGGTAGCCAATGAT
TTGAGTATAGGGTGGTGGATTATGAGCATGTGGGGGTGGGTTACTTTAGCTTTGCTTTTTGAACTAGTTCTTATGTTTGGAACTTTGGGTAAGGAAGTTTTTGAGCATGT
GAGGGTGGGTTACTTTAACTTTGTTCTTTGGACTAGTCCTAATGTTCCAAACATTGGCTTGGAGGATTGTTTTAGCTTTTCTAGTTCACTTGTTAAAGGTTTTGGGCTTG
TGAGGGTAGATTGCCGTGGATTTGCTTTGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAACTTTTGGAAAGTGGGTTGAAGGTTAAGGAGTATGAGTTGCTTCGCAGGAACTTCAGTGACACTGGATGCTTTGACTTTGGTCTTCAGGAGCACATTGATATTGG
AATCAATTATGTATTGCCTGAAGAAGATATAGGAATTGAAATTTTCTATGGAGTTGGGGTTGGGAACATGGATGGAGCTCTCAGGATCTGTCCTGAACAGTTTTATCCCT
ATCTGCGACAATCTCTTGTGGGGATAAAAACTTTCTGTAGGACTGGGATAAGGAGCCAGGGTAGTCCTGAACCCACTTTGAATGATTTGTGTTTTATGGTAGCCAATGAT
TTGAGTATAGGGTGGTGGATTATGAGCATGTGGGGGTGGGTTACTTTAGCTTTGCTTTTTGAACTAGTTCTTATGTTTGGAACTTTGGGTAAGGAAGTTTTTGAGCATGT
GAGGGTGGGTTACTTTAACTTTGTTCTTTGGACTAGTCCTAATGTTCCAAACATTGGCTTGGAGGATTGTTTTAGCTTTTCTAGTTCACTTGTTAAAGGTTTTGGGCTTG
TGAGGGTAGATTGCCGTGGATTTGCTTTGAAGTAG
Protein sequenceShow/hide protein sequence
MQLLESGLKVKEYELLRRNFSDTGCFDFGLQEHIDIGINYVLPEEDIGIEIFYGVGVGNMDGALRICPEQFYPYLRQSLVGIKTFCRTGIRSQGSPEPTLNDLCFMVAND
LSIGWWIMSMWGWVTLALLFELVLMFGTLGKEVFEHVRVGYFNFVLWTSPNVPNIGLEDCFSFSSSLVKGFGLVRVDCRGFALK