; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg021616 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021616
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionendoribonuclease Dicer homolog 2-like
Genome locationscaffold2:17495922..17501028
RNA-Seq ExpressionSpg021616
SyntenySpg021616
Gene Ontology termsGO:0010216 - maintenance of DNA methylation (biological process)
GO:0010267 - production of ta-siRNAs involved in RNA interference (biological process)
GO:0051214 - RNA virus induced gene silencing (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR006935 - Helicase/UvrB, N-terminal
IPR014001 - Helicase superfamily 1/2, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038236.1 endoribonuclease Dicer-like protein 2 isoform X2 [Cucumis melo var. makuwa]3.0e-12888.89Show/hide
Query:  MALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGD
        MA NME ENEQLVADPL FARSYQLEGLEKALKQNT+VFLETGSGKTLIAIMLLRSFAHQLRKPSPF+AVFLVPQVVLVTQQAEALKMHTDLSVG YYGD
Subjt:  MALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGD

Query:  MGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMY
        MG+DFWDGA+WK+EIEKHEVLVMTPAILLNGLRHSFF +SMIKVL++DECHHARGKHPYA IMTEFYHQ+L LGKS+LPRIFGMTASPIKSKGGNSEL Y
Subjt:  MGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMY

Query:  WPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK
        W  I+ELESLLNSKVYT SSESELA FVP+STPKFKFY+ KDIPYALYEQLA  LKVLK K
Subjt:  WPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK

KAG6590107.1 Endoribonuclease Dicer-like 2, partial [Cucurbita argyrosperma subsp. sororia]3.6e-12988.64Show/hide
Query:  EHGMALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFY
        E GMA  ME+E+EQL+ADP+PFARSYQLEGLEKALKQNT+VFLETGSGKTLIAIMLLRSFAHQLRKPSPF AVFLVPQVVLVTQQAEALKMHT+LSVG Y
Subjt:  EHGMALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFY

Query:  YGDMGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSE
        YGDMGVDFWDG VWKQEI+KHEVLVMTPAILLN LRHSF QLSMIKVLI+DECHHARGKHPYA IM+EFYH++LPL KSNLPR+FGMTASPIKSKGGNSE
Subjt:  YGDMGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSE

Query:  LMYWPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK
        LM W  I++LESLLNSKVYTCS ESELAKFVPISTPKFKFYMHKDIPYALYEQLA+ LKVLKLK
Subjt:  LMYWPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK

XP_004139098.1 endoribonuclease Dicer homolog 2 isoform X1 [Cucumis sativus]4.7e-12990.8Show/hide
Query:  MALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGD
        MA NME ENEQLVADPL FARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPF+AVFLVPQVVLVTQQAEALKMHTDLSVG YYGD
Subjt:  MALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGD

Query:  MGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMY
        MGVDFWDGA+WK+EIEKHEVLVMTPAILLNGLRHSFF+LSMIKVLI+DECHHARGKHPYA IMTEFYHQ+L LGKS+LPRIFGMTASPIKSKGGNSEL Y
Subjt:  MGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMY

Query:  WPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK
        W  I+ELESLLNSKVYT SSESELA FVPISTPKFKFY+ KDIPYALYEQLA  LKVLK K
Subjt:  WPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK

XP_008443670.1 PREDICTED: endoribonuclease Dicer homolog 2 isoform X1 [Cucumis melo]3.0e-12888.89Show/hide
Query:  MALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGD
        MA NME ENEQLVADPL FARSYQLEGLEKALKQNT+VFLETGSGKTLIAIMLLRSFAHQLRKPSPF+AVFLVPQVVLVTQQAEALKMHTDLSVG YYGD
Subjt:  MALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGD

Query:  MGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMY
        MG+DFWDGA+WK+EIEKHEVLVMTPAILLNGLRHSFF +SMIKVL++DECHHARGKHPYA IMTEFYHQ+L LGKS+LPRIFGMTASPIKSKGGNSEL Y
Subjt:  MGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMY

Query:  WPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK
        W  I+ELESLLNSKVYT SSESELA FVP+STPKFKFY+ KDIPYALYEQLA  LKVLK K
Subjt:  WPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK

XP_008443674.1 PREDICTED: endoribonuclease Dicer homolog 2 isoform X2 [Cucumis melo]3.0e-12888.89Show/hide
Query:  MALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGD
        MA NME ENEQLVADPL FARSYQLEGLEKALKQNT+VFLETGSGKTLIAIMLLRSFAHQLRKPSPF+AVFLVPQVVLVTQQAEALKMHTDLSVG YYGD
Subjt:  MALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGD

Query:  MGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMY
        MG+DFWDGA+WK+EIEKHEVLVMTPAILLNGLRHSFF +SMIKVL++DECHHARGKHPYA IMTEFYHQ+L LGKS+LPRIFGMTASPIKSKGGNSEL Y
Subjt:  MGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMY

Query:  WPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK
        W  I+ELESLLNSKVYT SSESELA FVP+STPKFKFY+ KDIPYALYEQLA  LKVLK K
Subjt:  WPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK

TrEMBL top hitse value%identityAlignment
A0A0A0LY14 Uncharacterized protein2.3e-12990.8Show/hide
Query:  MALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGD
        MA NME ENEQLVADPL FARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPF+AVFLVPQVVLVTQQAEALKMHTDLSVG YYGD
Subjt:  MALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGD

Query:  MGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMY
        MGVDFWDGA+WK+EIEKHEVLVMTPAILLNGLRHSFF+LSMIKVLI+DECHHARGKHPYA IMTEFYHQ+L LGKS+LPRIFGMTASPIKSKGGNSEL Y
Subjt:  MGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMY

Query:  WPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK
        W  I+ELESLLNSKVYT SSESELA FVPISTPKFKFY+ KDIPYALYEQLA  LKVLK K
Subjt:  WPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK

A0A1S3B8K1 endoribonuclease Dicer homolog 2 isoform X21.5e-12888.89Show/hide
Query:  MALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGD
        MA NME ENEQLVADPL FARSYQLEGLEKALKQNT+VFLETGSGKTLIAIMLLRSFAHQLRKPSPF+AVFLVPQVVLVTQQAEALKMHTDLSVG YYGD
Subjt:  MALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGD

Query:  MGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMY
        MG+DFWDGA+WK+EIEKHEVLVMTPAILLNGLRHSFF +SMIKVL++DECHHARGKHPYA IMTEFYHQ+L LGKS+LPRIFGMTASPIKSKGGNSEL Y
Subjt:  MGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMY

Query:  WPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK
        W  I+ELESLLNSKVYT SSESELA FVP+STPKFKFY+ KDIPYALYEQLA  LKVLK K
Subjt:  WPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK

A0A1S3B9B7 endoribonuclease Dicer homolog 2 isoform X11.5e-12888.89Show/hide
Query:  MALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGD
        MA NME ENEQLVADPL FARSYQLEGLEKALKQNT+VFLETGSGKTLIAIMLLRSFAHQLRKPSPF+AVFLVPQVVLVTQQAEALKMHTDLSVG YYGD
Subjt:  MALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGD

Query:  MGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMY
        MG+DFWDGA+WK+EIEKHEVLVMTPAILLNGLRHSFF +SMIKVL++DECHHARGKHPYA IMTEFYHQ+L LGKS+LPRIFGMTASPIKSKGGNSEL Y
Subjt:  MGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMY

Query:  WPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK
        W  I+ELESLLNSKVYT SSESELA FVP+STPKFKFY+ KDIPYALYEQLA  LKVLK K
Subjt:  WPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK

A0A5A7T7P3 Endoribonuclease Dicer-like protein 2 isoform X21.5e-12888.89Show/hide
Query:  MALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGD
        MA NME ENEQLVADPL FARSYQLEGLEKALKQNT+VFLETGSGKTLIAIMLLRSFAHQLRKPSPF+AVFLVPQVVLVTQQAEALKMHTDLSVG YYGD
Subjt:  MALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGD

Query:  MGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMY
        MG+DFWDGA+WK+EIEKHEVLVMTPAILLNGLRHSFF +SMIKVL++DECHHARGKHPYA IMTEFYHQ+L LGKS+LPRIFGMTASPIKSKGGNSEL Y
Subjt:  MGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMY

Query:  WPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK
        W  I+ELESLLNSKVYT SSESELA FVP+STPKFKFY+ KDIPYALYEQLA  LKVLK K
Subjt:  WPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK

A0A6J1JJH9 endoribonuclease Dicer homolog 2 isoform X11.9e-12889.27Show/hide
Query:  MALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGD
        MA  ME+E+EQLVADP+PFARSYQLEGLEKALKQNT+VFLETGSGKTLIAIMLLRSFAHQLRKPSPF AVFLVPQVVLVTQQAEALKMHT+LSVG YYGD
Subjt:  MALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGD

Query:  MGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMY
        MGVDFWDG VWKQEI+KHEVLVMTPAILLN LRHSF QLSMIKVLI+DECHHARGKHPYA IM+EFYH++LPL KSNLPR+FGMTASPIKSKGGNSELM 
Subjt:  MGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMY

Query:  WPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK
        W  I++LESLLNSKVYTCS ESELAKFVPISTPKFKFYMHKDIPYALYEQLA+ LKVLKLK
Subjt:  WPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK

SwissProt top hitse value%identityAlignment
Q10HL3 Endoribonuclease Dicer homolog 2a2.5e-6454.62Show/hide
Query:  DPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKP-SPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGDMGVDFWDGAVWKQ
        DP   AR YQLE LE+A++ NT+ FLETGSGKTLIA+MLLR++AH++R+P S   AVFLVP VVLV QQA  ++ HTDL V  + G+MGVDFWD A W+ 
Subjt:  DPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKP-SPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGDMGVDFWDGAVWKQ

Query:  EIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSN-LPRIFGMTASPIKSKGGNSELMYWPSIEELESLLN
        ++E  EVLVMTP ILL+ LRHSFF+L  I +LI DECHHARG  PYA I  EFYH +L    S+ LPRIFGM+AS I SK  N    Y   I E+E+L+N
Subjt:  EIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSN-LPRIFGMTASPIKSKGGNSELMYWPSIEELESLLN

Query:  SKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK
        SKVYT  SES L++++P ++ K   +   +I   L+  +   L  L  K
Subjt:  SKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK

Q3EBC8 Endoribonuclease Dicer homolog 26.4e-9769.08Show/hide
Query:  MEVE-NEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGDMGV
        ME E  +Q+ A PL FARSYQ+E LEKA+KQNT+VFLETGSGKTLIAIMLLRS+A+  RKPSP   VFLVPQVVLVTQQAEALKMHTDL VG Y+GDMGV
Subjt:  MEVE-NEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGDMGV

Query:  DFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMYWPS
        DFWD + WKQE++K+EVLVMTPAILL+ LRHSF  LSMIKVLI+DECHHA GKHPYA IM EFYH+ L  G SN+PRIFGMTAS +K+KG N +  YW  
Subjt:  DFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMYWPS

Query:  IEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLKVYIS
        I ELE+L+NSKVYTC +ES LA FVP STP FK+Y H  IP      L ++L+ L +K  +S
Subjt:  IEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLKVYIS

Q5N870 Endoribonuclease Dicer homolog 3a3.7e-5241.67Show/hide
Query:  NPVRLSLSLFSLSSEHGMALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLR-KPSPFIAVFLVPQVVLVTQQ
        NP++ SL   S   E G     + E +          R YQL+  E A+++NT+  L+TG+GKT+IA+ML++ F    R K +  + +FL P V LVTQQ
Subjt:  NPVRLSLSLFSLSSEHGMALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLR-KPSPFIAVFLVPQVVLVTQQ

Query:  AEALKMHTDLSVGFYYGDMGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIF
         E +++HTD  V  YYG  GVD W G  W+++I K++V+VMTP + L  LR++F  L M+ ++I DECHHA G HPY RIM EFYH+       + P +F
Subjt:  AEALKMHTDLSVGFYYGDMGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIF

Query:  GMTASPIKSKGGNSELMYWPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVL
        GMTASP+  KG +S L       ELE+LL++K+YT S   E+   VP +    ++Y  K +    +E L++EL VL
Subjt:  GMTASPIKSKGGNSELMYWPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVL

Q69LX2 Endoribonuclease Dicer homolog 2b1.4e-6454.62Show/hide
Query:  DPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKP-SPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGDMGVDFWDGAVWKQ
        DP   AR YQLE LE+A++ NT+ FLETGSGKTLIA+MLLR++AH++R+P S   AVFLVP VVLV QQA  ++ HTDL V  + G+MGVDFWD A W+ 
Subjt:  DPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKP-SPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGDMGVDFWDGAVWKQ

Query:  EIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSN-LPRIFGMTASPIKSKGGNSELMYWPSIEELESLLN
        ++E  EVLVMTP ILL+ LRHSFF+L  I +LI DECHHARG  PYA I  EFYH +L    S+ LPRIFGM+AS I SK  N    Y   I E+E+L+N
Subjt:  EIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSN-LPRIFGMTASPIKSKGGNSELMYWPSIEELESLLN

Query:  SKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK
        SKVYT  SES L++++P ++ K   +   +I   L+  +   L  L  K
Subjt:  SKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLK

Q9SP32 Endoribonuclease Dicer homolog 11.3e-4945.64Show/hide
Query:  ARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPS-PFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGDMGVDFWDGAVWKQEIEKH
        AR YQL+ LE+A  +NT+ FLETG+GKTLIAI+L++S    L   +   ++VFLVP+V LV QQAE ++  T   VG Y G+MG DFWD   W++E E  
Subjt:  ARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPS-PFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGDMGVDFWDGAVWKQEIEKH

Query:  EVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMYWPSIEELESLLNSKVYTC
        +VLVMT  ILLN LRHS  ++  I +LI+DECHHA  KHPY+ +M+EFYH      K   P IFGMTASP+  KG +S++     I  LE+ L+S V T 
Subjt:  EVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMYWPSIEELESLLNSKVYTC

Query:  SSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLK
            EL K VP+ +     Y      ++L+E + + +  ++
Subjt:  SSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLK

Arabidopsis top hitse value%identityAlignment
AT1G01040.1 dicer-like 19.3e-5145.64Show/hide
Query:  ARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPS-PFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGDMGVDFWDGAVWKQEIEKH
        AR YQL+ LE+A  +NT+ FLETG+GKTLIAI+L++S    L   +   ++VFLVP+V LV QQAE ++  T   VG Y G+MG DFWD   W++E E  
Subjt:  ARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPS-PFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGDMGVDFWDGAVWKQEIEKH

Query:  EVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMYWPSIEELESLLNSKVYTC
        +VLVMT  ILLN LRHS  ++  I +LI+DECHHA  KHPY+ +M+EFYH      K   P IFGMTASP+  KG +S++     I  LE+ L+S V T 
Subjt:  EVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMYWPSIEELESLLNSKVYTC

Query:  SSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLK
            EL K VP+ +     Y      ++L+E + + +  ++
Subjt:  SSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLK

AT1G01040.2 dicer-like 19.3e-5145.64Show/hide
Query:  ARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPS-PFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGDMGVDFWDGAVWKQEIEKH
        AR YQL+ LE+A  +NT+ FLETG+GKTLIAI+L++S    L   +   ++VFLVP+V LV QQAE ++  T   VG Y G+MG DFWD   W++E E  
Subjt:  ARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPS-PFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGDMGVDFWDGAVWKQEIEKH

Query:  EVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMYWPSIEELESLLNSKVYTC
        +VLVMT  ILLN LRHS  ++  I +LI+DECHHA  KHPY+ +M+EFYH      K   P IFGMTASP+  KG +S++     I  LE+ L+S V T 
Subjt:  EVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMYWPSIEELESLLNSKVYTC

Query:  SSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLK
            EL K VP+ +     Y      ++L+E + + +  ++
Subjt:  SSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLK

AT3G03300.1 dicer-like 24.6e-9869.08Show/hide
Query:  MEVE-NEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGDMGV
        ME E  +Q+ A PL FARSYQ+E LEKA+KQNT+VFLETGSGKTLIAIMLLRS+A+  RKPSP   VFLVPQVVLVTQQAEALKMHTDL VG Y+GDMGV
Subjt:  MEVE-NEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGDMGV

Query:  DFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMYWPS
        DFWD + WKQE++K+EVLVMTPAILL+ LRHSF  LSMIKVLI+DECHHA GKHPYA IM EFYH+ L  G SN+PRIFGMTAS +K+KG N +  YW  
Subjt:  DFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMYWPS

Query:  IEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLKVYIS
        I ELE+L+NSKVYTC +ES LA FVP STP FK+Y H  IP      L ++L+ L +K  +S
Subjt:  IEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLKVYIS

AT3G03300.2 dicer-like 21.9e-6765.79Show/hide
Query:  VVLVTQQAEALKMHTDLSVGFYYGDMGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGK
        +V  TQQAEALKMHTDL VG Y+GDMGVDFWD + WKQE++K+EVLVMTPAILL+ LRHSF  LSMIKVLI+DECHHA GKHPYA IM EFYH+ L  G 
Subjt:  VVLVTQQAEALKMHTDLSVGFYYGDMGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGK

Query:  SNLPRIFGMTASPIKSKGGNSELMYWPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLKVYIS
        SN+PRIFGMTAS +K+KG N +  YW  I ELE+L+NSKVYTC +ES LA FVP STP FK+Y H  IP      L ++L+ L +K  +S
Subjt:  SNLPRIFGMTASPIKSKGGNSELMYWPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLKVYIS

AT3G03300.3 dicer-like 24.6e-9869.08Show/hide
Query:  MEVE-NEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGDMGV
        ME E  +Q+ A PL FARSYQ+E LEKA+KQNT+VFLETGSGKTLIAIMLLRS+A+  RKPSP   VFLVPQVVLVTQQAEALKMHTDL VG Y+GDMGV
Subjt:  MEVE-NEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGDMGV

Query:  DFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMYWPS
        DFWD + WKQE++K+EVLVMTPAILL+ LRHSF  LSMIKVLI+DECHHA GKHPYA IM EFYH+ L  G SN+PRIFGMTAS +K+KG N +  YW  
Subjt:  DFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHARGKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMYWPS

Query:  IEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLKVYIS
        I ELE+L+NSKVYTC +ES LA FVP STP FK+Y H  IP      L ++L+ L +K  +S
Subjt:  IEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLKVYIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCGCATCAACCATTGGGACCCGACATTGGAAAGAAGACGAACCGACCATGCCTTTTTGCTTTTCTTGACTGTTCCCTCGAAATTTCCTGCAACGCTTCTTCTGT
AAGTTTCAATCTCTCATTGGGTATTTGTTCGACTTTTAATCCTGTAAGATTGTCACTTTCATTATTTTCTCTGTCGTCAGAACACGGGATGGCGTTGAATATGGAAGTAG
AGAACGAACAGCTAGTTGCTGATCCTCTACCATTTGCCAGAAGTTATCAGTTGGAAGGACTGGAAAAGGCACTTAAACAGAACACGGTAGTGTTTTTGGAGACTGGTTCT
GGCAAGACTCTGATCGCTATCATGCTTTTGCGCAGCTTTGCTCATCAGCTACGCAAACCTTCACCTTTCATTGCTGTTTTCTTAGTTCCACAAGTTGTTTTGGTCACTCA
ACAAGCTGAAGCTCTGAAGATGCACACTGACTTGAGTGTTGGTTTTTATTACGGGGACATGGGGGTAGACTTTTGGGATGGTGCAGTTTGGAAGCAAGAAATAGAAAAAC
ACGAGGTGCTTGTGATGACTCCTGCAATTTTGCTAAATGGCTTGAGGCATAGCTTCTTTCAGCTAAGCATGATAAAGGTCTTAATAATGGATGAATGCCATCATGCCAGA
GGCAAACACCCTTATGCTCGTATCATGACGGAGTTCTATCACCAACGGTTACCTCTTGGTAAATCTAATCTTCCTAGAATATTTGGAATGACTGCTTCTCCAATAAAGTC
AAAGGGTGGCAACTCAGAATTGATGTATTGGCCATCTATAGAAGAACTCGAGTCCTTGTTGAATTCAAAGGTGTATACTTGCTCTAGTGAATCTGAGCTGGCTAAGTTTG
TGCCTATTTCAACTCCGAAGTTCAAATTTTACATGCACAAGGACATCCCATATGCATTATATGAGCAATTAGCAAAGGAGTTGAAGGTTTTGAAATTAAAGGTGTATATT
TCATTTCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCGCATCAACCATTGGGACCCGACATTGGAAAGAAGACGAACCGACCATGCCTTTTTGCTTTTCTTGACTGTTCCCTCGAAATTTCCTGCAACGCTTCTTCTGT
AAGTTTCAATCTCTCATTGGGTATTTGTTCGACTTTTAATCCTGTAAGATTGTCACTTTCATTATTTTCTCTGTCGTCAGAACACGGGATGGCGTTGAATATGGAAGTAG
AGAACGAACAGCTAGTTGCTGATCCTCTACCATTTGCCAGAAGTTATCAGTTGGAAGGACTGGAAAAGGCACTTAAACAGAACACGGTAGTGTTTTTGGAGACTGGTTCT
GGCAAGACTCTGATCGCTATCATGCTTTTGCGCAGCTTTGCTCATCAGCTACGCAAACCTTCACCTTTCATTGCTGTTTTCTTAGTTCCACAAGTTGTTTTGGTCACTCA
ACAAGCTGAAGCTCTGAAGATGCACACTGACTTGAGTGTTGGTTTTTATTACGGGGACATGGGGGTAGACTTTTGGGATGGTGCAGTTTGGAAGCAAGAAATAGAAAAAC
ACGAGGTGCTTGTGATGACTCCTGCAATTTTGCTAAATGGCTTGAGGCATAGCTTCTTTCAGCTAAGCATGATAAAGGTCTTAATAATGGATGAATGCCATCATGCCAGA
GGCAAACACCCTTATGCTCGTATCATGACGGAGTTCTATCACCAACGGTTACCTCTTGGTAAATCTAATCTTCCTAGAATATTTGGAATGACTGCTTCTCCAATAAAGTC
AAAGGGTGGCAACTCAGAATTGATGTATTGGCCATCTATAGAAGAACTCGAGTCCTTGTTGAATTCAAAGGTGTATACTTGCTCTAGTGAATCTGAGCTGGCTAAGTTTG
TGCCTATTTCAACTCCGAAGTTCAAATTTTACATGCACAAGGACATCCCATATGCATTATATGAGCAATTAGCAAAGGAGTTGAAGGTTTTGAAATTAAAGGTGTATATT
TCATTTCCATAA
Protein sequenceShow/hide protein sequence
MKSHQPLGPDIGKKTNRPCLFAFLDCSLEISCNASSVSFNLSLGICSTFNPVRLSLSLFSLSSEHGMALNMEVENEQLVADPLPFARSYQLEGLEKALKQNTVVFLETGS
GKTLIAIMLLRSFAHQLRKPSPFIAVFLVPQVVLVTQQAEALKMHTDLSVGFYYGDMGVDFWDGAVWKQEIEKHEVLVMTPAILLNGLRHSFFQLSMIKVLIMDECHHAR
GKHPYARIMTEFYHQRLPLGKSNLPRIFGMTASPIKSKGGNSELMYWPSIEELESLLNSKVYTCSSESELAKFVPISTPKFKFYMHKDIPYALYEQLAKELKVLKLKVYI
SFP