CuGenDBv2

Gene ID	Spg021617
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Acetohydroxy-acid synthase small subunit
Genome location	scaffold2:17081990..17085841
RNA-Seq Expression	Spg021617
Synteny	Spg021617
Gene Ontology terms	GO:0009097 - isoleucine biosynthetic process (biological process) GO:0009099 - valine biosynthetic process (biological process) GO:0050790 - regulation of catalytic activity (biological process) GO:0005737 - cytoplasm (cellular component) GO:1990610 - acetolactate synthase regulator activity (molecular function)
InterPro domains	IPR004789 - Acetolactate synthase, small subunit

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0038202.1 acetolactate synthase small subunit 1 [Cucumis melo var. makuwa]

3.3e-17

Show/hide

Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST
        IALRREKMGETAPFWRFSAASYPDLEDSRPVD+FVGDAIQS NG +PTST
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST

KAG6590112.1 Acetolactate synthase small subunit 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

5.6e-17

Show/hide

Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST
        IALRREKMGETAPFWRFSAASYPDL+DSRPVD FVGDA QS+NGNIPTST
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST

XP_008443657.1 PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Cucumis melo]

3.3e-17

Show/hide

Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST
        IALRREKMGETAPFWRFSAASYPDLEDSRPVD+FVGDAIQS NG +PTST
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST

XP_038880022.1 acetolactate synthase small subunit 2, chloroplastic-like isoform X1 [Benincasa hispida]

3.3e-17

Show/hide

Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST
        IALRREKMGETAPFWRFSAASYPDLEDSRPVD FVGDAIQS+NG +PTST
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST

XP_038880023.1 acetolactate synthase small subunit 2, chloroplastic-like isoform X2 [Benincasa hispida]

3.3e-17

Show/hide

Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST
        IALRREKMGETAPFWRFSAASYPDLEDSRPVD FVGDAIQS+NG +PTST
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B8L7 Acetohydroxy-acid synthase small subunit

1.6e-17

Show/hide

Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST
        IALRREKMGETAPFWRFSAASYPDLEDSRPVD+FVGDAIQS NG +PTST
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST

A0A5A7T3Z5 Acetohydroxy-acid synthase small subunit

1.6e-17

Show/hide

Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST
        IALRREKMGETAPFWRFSAASYPDLEDSRPVD+FVGDAIQS NG +PTST
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST

A0A6J1EAN7 Acetohydroxy-acid synthase small subunit

7.9e-17

Show/hide

Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST
        IALRREKMGETAPFWRFSAASYPDLEDSRPV+ FVGD+IQSVNGNI TST
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST

A0A6J1HBD4 Acetohydroxy-acid synthase small subunit

2.7e-17

Show/hide

Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST
        IALRREKMGETAPFWRFSAASYPDL+DSRPVD FVGDA QS+NGNIPTST
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST

A0A6J1JLL8 Acetohydroxy-acid synthase small subunit

2.7e-17

Show/hide

Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST
        IALRREKMGETAPFWRFSAASYPDL+DSRPVD FVGDA QS+NGNIPTST
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTST

SwissProt top hits

e value

%identity

Alignment

Q93YZ7 Acetolactate synthase small subunit 2, chloroplastic

6.5e-08

83.87

Show/hide

Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPV
        IALRREKMG TAPFWRFSAASYPDL++  PV
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPV

Q9FFF4 Acetolactate synthase small subunit 1, chloroplastic

9.3e-07

Show/hide

Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGN
        IALRREKMGETAPFWRFSAASYP L      +T       ++ GN
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGN

Q9SMC2 Acetolactate synthase small subunit 1, chloroplastic

8.4e-08

63.64

Show/hide

Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNG
        IALRREKMGE+APFWRFSAASYPDLE +    T      ++ NG
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNG

Arabidopsis top hits

e value

%identity

Alignment

AT2G31810.1 ACT domain-containing small subunit of acetolactate synthase protein

4.6e-09

83.87

Show/hide

Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPV
        IALRREKMG TAPFWRFSAASYPDL++  PV
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPV

AT2G31810.2 ACT domain-containing small subunit of acetolactate synthase protein

4.6e-09

83.87

Show/hide

Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPV
        IALRREKMG TAPFWRFSAASYPDL++  PV
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPV

AT2G31810.3 ACT domain-containing small subunit of acetolactate synthase protein

4.6e-09

83.87

Show/hide

Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPV
        IALRREKMG TAPFWRFSAASYPDL++  PV
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPV

AT5G16290.1 VALINE-TOLERANT 1

6.6e-08

Show/hide

Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGN
        IALRREKMGETAPFWRFSAASYP L      +T       ++ GN
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGN

AT5G16290.2 VALINE-TOLERANT 1

6.6e-08

Show/hide

Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGN
        IALRREKMGETAPFWRFSAASYP L      +T       ++ GN
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGGAGAACAAAACGGCACTGCCCAGACTTAAAAAAAGTGTTGAGGAGTGGTTATGTCTATTTTCAAGCTTCATTGGATTCTCGATCAGGTCATTTAAAGGAAATGTG
TTGCAACTATGGTCCATCTCTTAAGCCTACTTATAAATTACTGCGGTCAAATATAGCGTTGAGAAGGGAGAAAATGGGGGAGACAGCTCCCTTTTGGAGGTTCTCAGCAG
CTTCTTATCCTGATCTCGAAGACTCAAGGCCGGTTGACACCTTTGTAGGGGATGCAATTCAATCCGTCAATGGCAACATCCCTACATCAACAGTATGTCGTGCCTTCATC
CATAAATTAAAAGCCCTTAAAGCAGTCATTCAAGAATGGAACAAATTTACTTTCGGCTGTCTGTCCACCTTGAGAAATCAGCTTATCTTCGATCTGTCATTATTGGATGC
ATGGGAGGAAAAAGGTGAAGTGAATTCCAGATACATCATGGAGCACAAAGAAGATCTGTTAAGGCACAAATCCTCTCCATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRRTKRHCPDLKKVLRSGYVYFQASLDSRSGHLKEMCCNYGPSLKPTYKLLRSNIALRREKMGETAPFWRFSAASYPDLEDSRPVDTFVGDAIQSVNGNIPTSTVCRAFI
HKLKALKAVIQEWNKFTFGCLSTLRNQLIFDLSLLDAWEEKGEVNSRYIMEHKEDLLRHKSSP

Spg021617 (gene) of Sponge gourd (cylindrica) v1 genome